FFCP PHASE1:Hg19::chr3:128943968..128943986,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
No edit summary |
No edit summary |
||
| Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | ||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr3:128943968..128943986,+ | |||
|coexpression_cluster_id=C26 | |coexpression_cluster_id=C26 | ||
|description=CAGE_peak_at_chr3:128943968..128943986,+ | |description=CAGE_peak_at_chr3:128943968..128943986,+ | ||
Latest revision as of 15:38, 29 July 2015
| Short description: | p@chr3:128943968..128943986, + |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_at_chr3:128943968..128943986, + |
| Coexpression cluster: | C26_Eosinophils_Neutrophils_CD14_CD14CD16_Basophils_Monocytederived_Whole |
| Association with transcript: | NA |
| EntrezGene: | NA |
| HGNC: | NA |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p@chr3:128943968..128943986+ |
|---|
0
2
4
6
8
10
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| classical monocyte | 1.95e-153 | 42 |
| CD14-positive, CD16-negative classical monocyte | 1.95e-153 | 42 |
| defensive cell | 1.17e-146 | 48 |
| phagocyte | 1.17e-146 | 48 |
| myeloid leukocyte | 3.78e-128 | 72 |
| monopoietic cell | 1.69e-115 | 59 |
| monocyte | 1.69e-115 | 59 |
| monoblast | 1.69e-115 | 59 |
| promonocyte | 1.69e-115 | 59 |
| macrophage dendritic cell progenitor | 1.77e-111 | 61 |
Showing 1 to 10 of 33 entries
| Ontology term | p-value | n |
|---|---|---|
| bone marrow | 5.69e-88 | 76 |
| bone element | 6.04e-81 | 82 |
| skeletal element | 5.12e-73 | 90 |
| immune system | 2.16e-70 | 93 |
| hematopoietic system | 9.74e-70 | 98 |
| blood island | 9.74e-70 | 98 |
| skeletal system | 7.16e-65 | 100 |
| hemolymphoid system | 1.75e-62 | 108 |
| musculoskeletal system | 2.79e-35 | 167 |
| lateral plate mesoderm | 5.41e-29 | 203 |
Showing 1 to 10 of 14 entries
