FFCP PHASE1:Mm9::chr19:37450719..37450732,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=105|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:37450719..37450732,-|id=chr19:37450719..37450732,-|ontology_enrichment_celltype=CL:0002563!4.71e-08!9;CL:0002251!4.71e-08!9|ontology_enrichment_celltype_v019_2=CL:0002563,3.48e-21,9;CL:0002251,3.48e-21,9;CL:0002250,4.51e-17,3;CL:0000066,8.62e-13,25;CL:0002076,1.45e-12,15;CL:0000223,1.80e-12,20;CL:0000239,1.63e-08,6;CL:0000677,1.63e-08,6;CL:0000584,1.63e-08,6;CL:0000764,6.89e-08,3;CL:0000765,6.89e-08,3;CL:0000038,6.89e-08,3;CL:0000547,6.89e-08,3;CL:0000075,2.30e-07,7|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=DOID:0050686,3.28e-08,6;DOID:2531,6.89e-08,3;DOID:0060083,6.89e-08,3;DOID:1240,6.89e-08,3|ontology_enrichment_uberon=UBERON:0003350!4.71e-08!9;UBERON:0004808!4.71e-08!9;UBERON:0001277!4.71e-08!9;UBERON:0000485!1.66e-07!11|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.48e-21,9;UBERON:0004808,3.48e-21,9;UBERON:0001277,3.48e-21,9;UBERON:0000485,2.85e-17,11;UBERON:0001242,1.48e-14,13;UBERON:0001262,1.48e-14,13;UBERON:0004786,1.48e-14,13;UBERON:0000344,1.45e-12,15;UBERON:0004923,1.09e-07,24|phase1_expression=0.160148847104794,1.74487703819681,0.909998478779072,2.41971369045464,0.500895729946347,1.17515490338323,0.934450562382103,0.774739940649458,2.111830832275,1.40438715793196,0.171217968225505,0.0797721589953364,0.856003649656029,0.961624426608971,0.333109761815663,0,0.699561878128147,0,0.137114433605739,0,0.255129870453209,0.0992909512008853,0,0,0.45881856213434,1.72269589234506,0.430761996159075,0.861884930743556,0,0,0,1.90509202037889,1.23012957516914,0,6.35473563452804,1.49611180822643,7.75843553797003,0.837063261473815,0.7813353445238,1.0470474879476,2.35292595212406,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0,0.207379224616955,0.405017814995072,0.210324961351382,0,0,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0.263772575460388,0.0914876436024097,0,0.279182999001381,0,0.30559649555362,0,0,0.186399445825301,0.075726193333184,0.0755715601067855,1.44932244350839,0,0,0,0.649776417447669,0,0,0.340860645156116,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0,0,1.17112318804619,0.209446706813455,0,0.479260498023681,0,0.254140454146129,0.299581278809645,0,0.251308704225729,0.173824320192276,0,0.20778804455956,0,0,0.124406970610093,0,0,0.260240885925407,0.459804208866946,0,0.150704817835715,0.408218994907967,0.2562274405697,0.562210347358373,0.258703370739016,0.862271971731369,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0.772043721344145,0.284163499395593,0,0.234526059981096,0.36012412292203,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,0,0.102904612379284,0.330418782983798,0.264450566663544,0.426576501070468,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0,0,0.898819408654221,0.216138049874694,0.199141273254367,0.379335801906163,0,0,0,0.193952487167626,0,0.0632365371242573,0,0.31399745568275,0,0,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0.651859905768103,0.169745085775188,0.704070744865506,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,0,0,1.56175497718655,0.430846795465598,0.477937595905104,0.445597348164788,0.566153061577665,0.809621403349789,1.16902343164525,0.790575555893047,0,0.283880170416537,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.36012218806262,0.646793418913773,0.428674070063185,0,0,0,0.304464949114599,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0.556275906031529,0.170870880797853,0.206386867963223,0,0,0.27338845544205,0.457556346413045,0.339956859987711,0,0.829199842826543,0,0,0.406638934253697,0.216010681643603,0,0.436725127492355,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0.56369293868419,0.149516546043979,0.496375471371293,0.194451188344048,0.258319646955462,0,0.234714477291508,0.2604087696879,0.104859344425711,0.241584120826006,0.288030006257865,0.316011120628178,0.202725215290164,0.308132871494482,0,0,0.596044064343795,0.120195449519969,0.295379054349154,0.403865799792591,0.228620419965,0.201652370273681,0.292373642219257,0.288635524920988,0.116876902181569,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0.25384382367503,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.249810577937946,0,0,0.382576664137687,0,0|short_description=p@chr19:37450719..37450732,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=105 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:37450719..37450732,- | |||
|description=CAGE_peak_at_chr19:37450719..37450732,- | |||
|id=chr19:37450719..37450732,- | |||
|ontology_enrichment_celltype=CL:0002563!4.71e-08!9;CL:0002251!4.71e-08!9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,3.48e-21,9;CL:0002251,3.48e-21,9;CL:0002250,4.51e-17,3;CL:0000066,8.62e-13,25;CL:0002076,1.45e-12,15;CL:0000223,1.80e-12,20;CL:0000239,1.63e-08,6;CL:0000677,1.63e-08,6;CL:0000584,1.63e-08,6;CL:0000764,6.89e-08,3;CL:0000765,6.89e-08,3;CL:0000038,6.89e-08,3;CL:0000547,6.89e-08,3;CL:0000075,2.30e-07,7 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2=DOID:0050686,3.28e-08,6;DOID:2531,6.89e-08,3;DOID:0060083,6.89e-08,3;DOID:1240,6.89e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0003350!4.71e-08!9;UBERON:0004808!4.71e-08!9;UBERON:0001277!4.71e-08!9;UBERON:0000485!1.66e-07!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003350,3.48e-21,9;UBERON:0004808,3.48e-21,9;UBERON:0001277,3.48e-21,9;UBERON:0000485,2.85e-17,11;UBERON:0001242,1.48e-14,13;UBERON:0001262,1.48e-14,13;UBERON:0004786,1.48e-14,13;UBERON:0000344,1.45e-12,15;UBERON:0004923,1.09e-07,24 | |||
|phase1_expression=0.160148847104794,1.74487703819681,0.909998478779072,2.41971369045464,0.500895729946347,1.17515490338323,0.934450562382103,0.774739940649458,2.111830832275,1.40438715793196,0.171217968225505,0.0797721589953364,0.856003649656029,0.961624426608971,0.333109761815663,0,0.699561878128147,0,0.137114433605739,0,0.255129870453209,0.0992909512008853,0,0,0.45881856213434,1.72269589234506,0.430761996159075,0.861884930743556,0,0,0,1.90509202037889,1.23012957516914,0,6.35473563452804,1.49611180822643,7.75843553797003,0.837063261473815,0.7813353445238,1.0470474879476,2.35292595212406,0,0,0.125896817975577,0.202753862439029,0.183546752161682,0,0,0.219686182734472,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0.299600110518405,0,0.207379224616955,0.405017814995072,0.210324961351382,0,0,0.122490799214954,0.0958454710182364,0,0,0.127687338085188,0.153606533256243,0.263772575460388,0.0914876436024097,0,0.279182999001381,0,0.30559649555362,0,0,0.186399445825301,0.075726193333184,0.0755715601067855,1.44932244350839,0,0,0,0.649776417447669,0,0,0.340860645156116,0,0,0.14084341977668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144599356919912,0,0,0.220841518460394,0,0,1.17112318804619,0.209446706813455,0,0.479260498023681,0,0.254140454146129,0.299581278809645,0,0.251308704225729,0.173824320192276,0,0.20778804455956,0,0,0.124406970610093,0,0,0.260240885925407,0.459804208866946,0,0.150704817835715,0.408218994907967,0.2562274405697,0.562210347358373,0.258703370739016,0.862271971731369,0.189106080167819,0,0,0,0,0,0.199034266818493,0,0.772043721344145,0.284163499395593,0,0.234526059981096,0.36012412292203,0,0,0.154267112887378,0,0,0.116765342367169,0,0,0,0,0,0.134206418760372,0,0.102904612379284,0.330418782983798,0.264450566663544,0.426576501070468,0,0,0.201683524623343,0.22237804384487,0.190225626112559,0,0,0,0,0,0.898819408654221,0.216138049874694,0.199141273254367,0.379335801906163,0,0,0,0.193952487167626,0,0.0632365371242573,0,0.31399745568275,0,0,0,0,0.224862112384854,0.202860121388503,0.241177159752417,0,0,0,0,0,0,0,0,0,0,0,0,0.651859905768103,0.169745085775188,0.704070744865506,0,0,0,0.157635144106191,0,0,0,0.172684981865896,0,0,0,0,0,0,0.117211686592203,0,0,0,1.56175497718655,0.430846795465598,0.477937595905104,0.445597348164788,0.566153061577665,0.809621403349789,1.16902343164525,0.790575555893047,0,0.283880170416537,0.178065603667255,0,0,0,0.242780636154981,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0.36012218806262,0.646793418913773,0.428674070063185,0,0,0,0.304464949114599,0,0,0,0,0.161464426695906,0.0603129249281559,0,0,0,0.556275906031529,0.170870880797853,0.206386867963223,0,0,0.27338845544205,0.457556346413045,0.339956859987711,0,0.829199842826543,0,0,0.406638934253697,0.216010681643603,0,0.436725127492355,0.134864346384821,0.0826534557253359,0.26175594198403,0,0,0.56369293868419,0.149516546043979,0.496375471371293,0.194451188344048,0.258319646955462,0,0.234714477291508,0.2604087696879,0.104859344425711,0.241584120826006,0.288030006257865,0.316011120628178,0.202725215290164,0.308132871494482,0,0,0.596044064343795,0.120195449519969,0.295379054349154,0.403865799792591,0.228620419965,0.201652370273681,0.292373642219257,0.288635524920988,0.116876902181569,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0.207574695168353,0,0,0.243106717068294,0,0,0,0,0,0.252697211763798,0.25347929989024,0,0.187283014939765,0,0.0574354689556133,0,0,0.192909220463705,0,0,0,0,0,0,0.0941093804153306,0.25384382367503,0.182927972872773,0,0.271608227691724,0,0.237270036248348,0.0985044823755635,0,0.309873682371932,0.192906610981141,0.249810577937946,0,0,0.382576664137687,0,0 | |||
|short_description=p@chr19:37450719..37450732,- | |||
}} |
Latest revision as of 00:02, 4 August 2015
Short description: | p@chr19:37450719..37450732, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:37450719..37450732, - |
Coexpression cluster: | MCL_coexpression_mm9:105 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 3.48e-21 | 9 |
epithelial cell of alimentary canal | 3.48e-21 | 9 |
intestinal crypt stem cell | 4.51e-17 | 3 |
epithelial cell | 8.62e-13 | 25 |
endo-epithelial cell | 1.45e-12 | 15 |
endodermal cell | 1.80e-12 | 20 |
brush border epithelial cell | 1.63e-08 | 6 |
gut absorptive cell | 1.63e-08 | 6 |
enterocyte | 1.63e-08 | 6 |
erythroid lineage cell | 6.89e-08 | 3 |
erythroblast | 6.89e-08 | 3 |
erythroid progenitor cell | 6.89e-08 | 3 |
proerythroblast | 6.89e-08 | 3 |
columnar/cuboidal epithelial cell | 2.30e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
epithelium of mucosa | 3.48e-21 | 9 |
gastrointestinal system epithelium | 3.48e-21 | 9 |
intestinal epithelium | 3.48e-21 | 9 |
simple columnar epithelium | 2.85e-17 | 11 |
intestinal mucosa | 1.48e-14 | 13 |
wall of intestine | 1.48e-14 | 13 |
gastrointestinal system mucosa | 1.48e-14 | 13 |
mucosa | 1.45e-12 | 15 |
organ component layer | 1.09e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
organ system cancer | 3.28e-08 | 6 |
hematologic cancer | 6.89e-08 | 3 |
immune system cancer | 6.89e-08 | 3 |
leukemia | 6.89e-08 | 3 |