FFCP PHASE1:Mm9::chr19:39382184..39382199,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=128|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr19:39382184..39382199,+|id=chr19:39382184..39382199,+|ontology_enrichment_celltype=CL:0000181!3.35e-20!5;CL:0000417!3.35e-20!5;CL:0000668!3.35e-20!5;CL:0000412!3.35e-20!5;CL:0000182!3.35e-20!5;CL:0000414!2.63e-09!11;CL:0000057!4.83e-07!1;CL:0000632!4.83e-07!1|ontology_enrichment_celltype_v019_2=CL:0000182,1.00e-26,5;CL:0000057,6.33e-09,1;CL:0000632,6.33e-09,1;CL:0000223,6.53e-07,20|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!3.53e-26!22;UBERON:0007499!3.53e-26!22;UBERON:0006925!3.53e-26!22;UBERON:0009497!3.53e-26!22;UBERON:0000015!3.53e-26!22;UBERON:0002423!3.53e-26!22;UBERON:0006235!3.53e-26!22;UBERON:0008835!3.53e-26!22;UBERON:0003894!3.53e-26!22;UBERON:0004161!3.53e-26!22;UBERON:0008836!3.53e-26!22;UBERON:0009854!5.40e-25!23;UBERON:0009856!5.40e-25!23;UBERON:0002365!6.57e-23!25;UBERON:0002330!6.57e-23!25;UBERON:0005256!4.49e-14!47;UBERON:0005172!1.91e-13!49;UBERON:0005173!1.91e-13!49;UBERON:0002417!1.91e-13!49;UBERON:0000916!1.91e-13!49;UBERON:0003914!1.21e-11!47;UBERON:0002368!9.92e-11!60;UBERON:0005057!1.24e-10!51;UBERON:0002530!8.51e-10!65;UBERON:0003929!9.08e-10!55;UBERON:0009569!1.26e-09!66;UBERON:0000949!1.05e-08!72;UBERON:0000490!6.28e-08!66;UBERON:0005911!1.58e-07!69;UBERON:0002405!2.11e-07!70;UBERON:0005177!3.76e-07!85|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.29e-29,22;UBERON:0007499,5.29e-29,22;UBERON:0006925,5.29e-29,22;UBERON:0009497,5.29e-29,22;UBERON:0000015,5.29e-29,22;UBERON:0002423,5.29e-29,22;UBERON:0006235,5.29e-29,22;UBERON:0008835,5.29e-29,22;UBERON:0003894,5.29e-29,22;UBERON:0004161,5.29e-29,22;UBERON:0008836,5.29e-29,22;UBERON:0009854,1.01e-27,23;UBERON:0009856,1.01e-27,23;UBERON:0002365,1.80e-25,25;UBERON:0002330,1.80e-25,25;UBERON:0005256,6.49e-14,45;UBERON:0003914,2.69e-13,47;UBERON:0005172,9.95e-13,49;UBERON:0005173,9.95e-13,49;UBERON:0002417,9.95e-13,49;UBERON:0000916,9.95e-13,49;UBERON:0003929,2.86e-11,55;UBERON:0002368,2.82e-10,60;UBERON:0003104,4.27e-10,61;UBERON:0009142,4.27e-10,61;UBERON:0002530,1.97e-09,65;UBERON:0000490,2.80e-09,66;UBERON:0009569,2.80e-09,66;UBERON:0005911,7.62e-09,69;UBERON:0000949,1.91e-08,72;UBERON:0005177,1.25e-07,79;UBERON:0001041,1.59e-07,80|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,7.47968467078526,16.1910957491345,53.2816662307089,16.1289679355041,3.65155492342555,0,0,0,0,0,0,0,0,0,0,3.31133251185274,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432276099749388,0.995706366271836,0,0,0,0,0,0,0,0,0,0,4.15033677922008,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,5.80931419278357,3.58794827043824,8.68398338454061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr19:39382184..39382199,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=128 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr19:39382184..39382199,+ | |||
|description=CAGE_peak_at_chr19:39382184..39382199,+ | |||
|id=chr19:39382184..39382199,+ | |||
|ontology_enrichment_celltype=CL:0000181!3.35e-20!5;CL:0000417!3.35e-20!5;CL:0000668!3.35e-20!5;CL:0000412!3.35e-20!5;CL:0000182!3.35e-20!5;CL:0000414!2.63e-09!11;CL:0000057!4.83e-07!1;CL:0000632!4.83e-07!1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.00e-26,5;CL:0000057,6.33e-09,1;CL:0000632,6.33e-09,1;CL:0000223,6.53e-07,20 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!3.53e-26!22;UBERON:0007499!3.53e-26!22;UBERON:0006925!3.53e-26!22;UBERON:0009497!3.53e-26!22;UBERON:0000015!3.53e-26!22;UBERON:0002423!3.53e-26!22;UBERON:0006235!3.53e-26!22;UBERON:0008835!3.53e-26!22;UBERON:0003894!3.53e-26!22;UBERON:0004161!3.53e-26!22;UBERON:0008836!3.53e-26!22;UBERON:0009854!5.40e-25!23;UBERON:0009856!5.40e-25!23;UBERON:0002365!6.57e-23!25;UBERON:0002330!6.57e-23!25;UBERON:0005256!4.49e-14!47;UBERON:0005172!1.91e-13!49;UBERON:0005173!1.91e-13!49;UBERON:0002417!1.91e-13!49;UBERON:0000916!1.91e-13!49;UBERON:0003914!1.21e-11!47;UBERON:0002368!9.92e-11!60;UBERON:0005057!1.24e-10!51;UBERON:0002530!8.51e-10!65;UBERON:0003929!9.08e-10!55;UBERON:0009569!1.26e-09!66;UBERON:0000949!1.05e-08!72;UBERON:0000490!6.28e-08!66;UBERON:0005911!1.58e-07!69;UBERON:0002405!2.11e-07!70;UBERON:0005177!3.76e-07!85 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,5.29e-29,22;UBERON:0007499,5.29e-29,22;UBERON:0006925,5.29e-29,22;UBERON:0009497,5.29e-29,22;UBERON:0000015,5.29e-29,22;UBERON:0002423,5.29e-29,22;UBERON:0006235,5.29e-29,22;UBERON:0008835,5.29e-29,22;UBERON:0003894,5.29e-29,22;UBERON:0004161,5.29e-29,22;UBERON:0008836,5.29e-29,22;UBERON:0009854,1.01e-27,23;UBERON:0009856,1.01e-27,23;UBERON:0002365,1.80e-25,25;UBERON:0002330,1.80e-25,25;UBERON:0005256,6.49e-14,45;UBERON:0003914,2.69e-13,47;UBERON:0005172,9.95e-13,49;UBERON:0005173,9.95e-13,49;UBERON:0002417,9.95e-13,49;UBERON:0000916,9.95e-13,49;UBERON:0003929,2.86e-11,55;UBERON:0002368,2.82e-10,60;UBERON:0003104,4.27e-10,61;UBERON:0009142,4.27e-10,61;UBERON:0002530,1.97e-09,65;UBERON:0000490,2.80e-09,66;UBERON:0009569,2.80e-09,66;UBERON:0005911,7.62e-09,69;UBERON:0000949,1.91e-08,72;UBERON:0005177,1.25e-07,79;UBERON:0001041,1.59e-07,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.72084775396277,7.47968467078526,16.1910957491345,53.2816662307089,16.1289679355041,3.65155492342555,0,0,0,0,0,0,0,0,0,0,3.31133251185274,0,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432276099749388,0.995706366271836,0,0,0,0,0,0,0,0,0,0,4.15033677922008,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,5.80931419278357,3.58794827043824,8.68398338454061,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr19:39382184..39382199,+ | |||
}} |
Latest revision as of 01:02, 4 August 2015
Short description: | p@chr19:39382184..39382199, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:39382184..39382199, + |
Coexpression cluster: | MCL_coexpression_mm9:128 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.00e-26 | 5 |
fibroblast | 6.33e-09 | 1 |
hepatic stellate cell | 6.33e-09 | 1 |
endodermal cell | 6.53e-07 | 20 |
Ontology term | p-value | n |
---|---|---|
liver | 5.29e-29 | 22 |
epithelial sac | 5.29e-29 | 22 |
digestive gland | 5.29e-29 | 22 |
epithelium of foregut-midgut junction | 5.29e-29 | 22 |
anatomical boundary | 5.29e-29 | 22 |
hepatobiliary system | 5.29e-29 | 22 |
foregut-midgut junction | 5.29e-29 | 22 |
hepatic diverticulum | 5.29e-29 | 22 |
liver primordium | 5.29e-29 | 22 |
septum transversum | 5.29e-29 | 22 |
liver bud | 5.29e-29 | 22 |
digestive tract diverticulum | 1.01e-27 | 23 |
sac | 1.01e-27 | 23 |
exocrine gland | 1.80e-25 | 25 |
exocrine system | 1.80e-25 | 25 |
trunk mesenchyme | 6.49e-14 | 45 |
epithelial tube | 2.69e-13 | 47 |
abdomen element | 9.95e-13 | 49 |
abdominal segment element | 9.95e-13 | 49 |
abdominal segment of trunk | 9.95e-13 | 49 |
abdomen | 9.95e-13 | 49 |
gut epithelium | 2.86e-11 | 55 |
endocrine gland | 2.82e-10 | 60 |
mesenchyme | 4.27e-10 | 61 |
entire embryonic mesenchyme | 4.27e-10 | 61 |
gland | 1.97e-09 | 65 |
unilaminar epithelium | 2.80e-09 | 66 |
subdivision of trunk | 2.80e-09 | 66 |
endo-epithelium | 7.62e-09 | 69 |
endocrine system | 1.91e-08 | 72 |
trunk region element | 1.25e-07 | 79 |
foregut | 1.59e-07 | 80 |