FFCP PHASE1:Mm9::chr19:7342786..7342803,+: Difference between revisions
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{{FFCP|EntrezGene=104383|HGNC=|MCL_coexpression_id=1241|UniProt=Q8C796|association_with_transcript=0bp_to_ENSMUST00000066646_5end|description=CAGE_peak_2_at_Rcor2_5end|id=chr19:7342786..7342803,+|ontology_enrichment_celltype=CL:0000540!7.24e-11!33;CL:0000047!7.24e-11!33;CL:0000031!7.24e-11!33;CL:0000404!7.24e-11!33;CL:0002319!9.11e-09!43;CL:0000221!1.09e-08!44;CL:0000133!1.09e-08!44;CL:0000393!4.90e-08!39;CL:0000211!4.90e-08!39|ontology_enrichment_celltype_v019_2=CL:0000540,4.49e-14,33;CL:0000047,4.49e-14,33;CL:0000031,4.49e-14,33;CL:0000404,4.49e-14,33;CL:0000393,1.42e-10,39;CL:0000211,1.42e-10,39;CL:0002319,9.15e-10,43;CL:0000221,2.37e-09,44;CL:0000133,2.37e-09,44;CL:0002609,4.40e-08,6;CL:0000117,7.60e-08,23;CL:0000337,7.60e-08,23;CL:0000107,1.33e-07,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.40e-08,64;UBERON:0003075,1.40e-08,64;UBERON:0007284,1.40e-08,64;UBERON:0004121,4.55e-08,95;UBERON:0000924,4.55e-08,95;UBERON:0006601,4.55e-08,95;UBERON:0003056,8.91e-08,49;UBERON:0001017,1.18e-07,73;UBERON:0002410,1.33e-07,9;UBERON:0001016,3.51e-07,75;UBERON:0010371,7.35e-07,73|phase1_expression=1.28119077683835,0,0,0,0,0.33575854382378,0,0.129123323441576,0.703943610758334,0.468129052643987,0,0.159544317990673,0.171200729931206,0,0,0,0,0,0,0.42438965179803,0.17008658030214,1.09220046320974,1.30599894569468,0,0,0,0,0,0,0,0,5.71527606113668,3.07532393792285,0,0.577703239502549,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0.183546752161682,0,1.96222640742402,0.439372365468944,0,0.419959264876088,0,0,0,0,0,0,0,5.86717736492834,5.81890077199236,4.43681982454325,0.338844532069132,0,0,0,0,0.898800331555214,0.768436610643109,18.3530613786005,12.5555522648472,16.1950220240564,1.71390590642282,0.883474163806454,8.69684674426174,13.7059023556078,16.5459381589804,0,0.127687338085188,0.153606533256243,3.82470234417562,6.12967212136145,4.68822033501084,0.837548997004143,0,0.15279824777681,0.589257170947335,1.13897344639282,3.35519002485541,0.227178579999552,0.377857800533928,0,0,0,0,0,0,0,0.170430322578058,0.779358013808606,0,0.422530259330042,1.28326477414318,0,0,0.432982082022428,0,0,0,0,0,1.73485326766136,0.304465478312141,0.691846491768175,0,0.117588707135705,0.251333182659351,0.247194967734374,0,0,0.647067399789637,1.10420759230197,0,0,0,0.209446706813455,0.255457055208591,0,0,0,0,0,2.51308704225729,0.173824320192276,0,0,0.324482526135515,0.509196819251581,0.622034853050465,0,0,6.63614259109789,7.58676944630461,6.12211241338187,6.78171680260718,6.12328492361951,7.30248205623644,9.46387418053261,0,7.97601573851516,3.59301552318857,3.34307135911503,1.53437012699302,0.834141747676794,3.1342694986995,0.823128545631774,2.38841120182192,0,0,0,1.65700618028402,0.469052119962192,0,0.710234206755631,1.18058539048442,0.925602677324269,1.62773761325285,1.07309360559848,0.467061369468678,1.31647879930784,0.656669856316381,0.324275238183423,0.438599962275997,0.878200461164203,0.134206418760372,0,5.55684906848136,0,0,3.41261200856374,2.09013004674395,1.15980715189884,0.80673409849337,0.444756087689741,0.380451252225118,0,0.164698954724011,0,0,0,0,0.216138049874694,0.199141273254367,3.79335801906163,1.5994791765362,0,1.01825663922657,0.969762435838129,0.771494018793504,0.126473074248515,0.147610147979602,0.31399745568275,0.123397163921801,0,0.166845105716094,0.393117990226406,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,2.65287976478679,0.488894929326078,1.01847051465113,0.469380496577004,0.167506257441816,0,0,0,0.221464689648775,0.637819074629948,0,0.172684981865896,0,0,0,0,0,0.481651769963376,0.117211686592203,0,0,1.89304931649754,3.51394869866975,3.01592756825919,1.19484398976276,3.7875774594007,2.83076530788832,2.42886421004937,4.67609372658099,2.76701444562566,0,0.283880170416537,1.6025904330053,0.81443479676788,0.329940245945071,0,2.91336763385978,1.81394134178851,0.377210159511796,0.590603785761546,0.307435147943927,0,0,0,0,0,0,0.340439605753788,5.94201610303324,4.2688365648309,3.21505552547388,1.95074257006501,3.92411398724555,1.15184314421485,1.2178597964584,0.469343416127421,0,0,0.16488625294148,0,0.241251699712623,0.238744688006273,0.164140899745061,0,0,0.170870880797853,0.206386867963223,0.740778109478847,0,0.136694227721025,0,0.169978429993855,0.559805809294632,0.414599921413271,0,4.4287039101359,0.813277868507395,0.648032044930808,1.04544148007234,0.436725127492355,0.134864346384821,0.165306911450672,0.26175594198403,0,0,0,1.94371509857172,1.32366792365678,1.36115831840833,0.516639293910924,1.01373675294467,0.821500670520278,1.8228613878153,2.30690557736564,0.966336483304024,0.864090018773596,0.632022241256357,1.01362607645082,0.616265742988964,0.77952493786677,1.07416017400489,1.19208812868759,1.08175904567972,1.32920574457119,0.706765149637033,0.990688486514998,0.705783295957884,0.292373642219257,0.962118416403295,1.16876902181569,0,0.665957860122194,0.986852422704233,1.67884616364078,0.19318959403219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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:104383 | |||
|HGNC= | |||
|MCL_coexpression_id=1241 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q8C796 | |||
|association_with_transcript=0bp_to_ENSMUST00000066646_5end | |||
|cluster_id=chr19:7342786..7342803,+ | |||
|description=CAGE_peak_2_at_Rcor2_5end | |||
|id=chr19:7342786..7342803,+ | |||
|ontology_enrichment_celltype=CL:0000540!7.24e-11!33;CL:0000047!7.24e-11!33;CL:0000031!7.24e-11!33;CL:0000404!7.24e-11!33;CL:0002319!9.11e-09!43;CL:0000221!1.09e-08!44;CL:0000133!1.09e-08!44;CL:0000393!4.90e-08!39;CL:0000211!4.90e-08!39 | |||
|ontology_enrichment_celltype_v019_2=CL:0000540,4.49e-14,33;CL:0000047,4.49e-14,33;CL:0000031,4.49e-14,33;CL:0000404,4.49e-14,33;CL:0000393,1.42e-10,39;CL:0000211,1.42e-10,39;CL:0002319,9.15e-10,43;CL:0000221,2.37e-09,44;CL:0000133,2.37e-09,44;CL:0002609,4.40e-08,6;CL:0000117,7.60e-08,23;CL:0000337,7.60e-08,23;CL:0000107,1.33e-07,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002346,1.40e-08,64;UBERON:0003075,1.40e-08,64;UBERON:0007284,1.40e-08,64;UBERON:0004121,4.55e-08,95;UBERON:0000924,4.55e-08,95;UBERON:0006601,4.55e-08,95;UBERON:0003056,8.91e-08,49;UBERON:0001017,1.18e-07,73;UBERON:0002410,1.33e-07,9;UBERON:0001016,3.51e-07,75;UBERON:0010371,7.35e-07,73 | |||
|phase1_expression=1.28119077683835,0,0,0,0,0.33575854382378,0,0.129123323441576,0.703943610758334,0.468129052643987,0,0.159544317990673,0.171200729931206,0,0,0,0,0,0,0.42438965179803,0.17008658030214,1.09220046320974,1.30599894569468,0,0,0,0,0,0,0,0,5.71527606113668,3.07532393792285,0,0.577703239502549,0,0,0,0,0,0,0,0,0.377690453926732,0.202753862439029,0.183546752161682,0,1.96222640742402,0.439372365468944,0,0.419959264876088,0,0,0,0,0,0,0,5.86717736492834,5.81890077199236,4.43681982454325,0.338844532069132,0,0,0,0,0.898800331555214,0.768436610643109,18.3530613786005,12.5555522648472,16.1950220240564,1.71390590642282,0.883474163806454,8.69684674426174,13.7059023556078,16.5459381589804,0,0.127687338085188,0.153606533256243,3.82470234417562,6.12967212136145,4.68822033501084,0.837548997004143,0,0.15279824777681,0.589257170947335,1.13897344639282,3.35519002485541,0.227178579999552,0.377857800533928,0,0,0,0,0,0,0,0.170430322578058,0.779358013808606,0,0.422530259330042,1.28326477414318,0,0,0.432982082022428,0,0,0,0,0,1.73485326766136,0.304465478312141,0.691846491768175,0,0.117588707135705,0.251333182659351,0.247194967734374,0,0,0.647067399789637,1.10420759230197,0,0,0,0.209446706813455,0.255457055208591,0,0,0,0,0,2.51308704225729,0.173824320192276,0,0,0.324482526135515,0.509196819251581,0.622034853050465,0,0,6.63614259109789,7.58676944630461,6.12211241338187,6.78171680260718,6.12328492361951,7.30248205623644,9.46387418053261,0,7.97601573851516,3.59301552318857,3.34307135911503,1.53437012699302,0.834141747676794,3.1342694986995,0.823128545631774,2.38841120182192,0,0,0,1.65700618028402,0.469052119962192,0,0.710234206755631,1.18058539048442,0.925602677324269,1.62773761325285,1.07309360559848,0.467061369468678,1.31647879930784,0.656669856316381,0.324275238183423,0.438599962275997,0.878200461164203,0.134206418760372,0,5.55684906848136,0,0,3.41261200856374,2.09013004674395,1.15980715189884,0.80673409849337,0.444756087689741,0.380451252225118,0,0.164698954724011,0,0,0,0,0.216138049874694,0.199141273254367,3.79335801906163,1.5994791765362,0,1.01825663922657,0.969762435838129,0.771494018793504,0.126473074248515,0.147610147979602,0.31399745568275,0.123397163921801,0,0.166845105716094,0.393117990226406,0.224862112384854,0.202860121388503,0,0,0,0,0,0,0,0,0,0,0,0,2.65287976478679,0.488894929326078,1.01847051465113,0.469380496577004,0.167506257441816,0,0,0,0.221464689648775,0.637819074629948,0,0.172684981865896,0,0,0,0,0,0.481651769963376,0.117211686592203,0,0,1.89304931649754,3.51394869866975,3.01592756825919,1.19484398976276,3.7875774594007,2.83076530788832,2.42886421004937,4.67609372658099,2.76701444562566,0,0.283880170416537,1.6025904330053,0.81443479676788,0.329940245945071,0,2.91336763385978,1.81394134178851,0.377210159511796,0.590603785761546,0.307435147943927,0,0,0,0,0,0,0.340439605753788,5.94201610303324,4.2688365648309,3.21505552547388,1.95074257006501,3.92411398724555,1.15184314421485,1.2178597964584,0.469343416127421,0,0,0.16488625294148,0,0.241251699712623,0.238744688006273,0.164140899745061,0,0,0.170870880797853,0.206386867963223,0.740778109478847,0,0.136694227721025,0,0.169978429993855,0.559805809294632,0.414599921413271,0,4.4287039101359,0.813277868507395,0.648032044930808,1.04544148007234,0.436725127492355,0.134864346384821,0.165306911450672,0.26175594198403,0,0,0,1.94371509857172,1.32366792365678,1.36115831840833,0.516639293910924,1.01373675294467,0.821500670520278,1.8228613878153,2.30690557736564,0.966336483304024,0.864090018773596,0.632022241256357,1.01362607645082,0.616265742988964,0.77952493786677,1.07416017400489,1.19208812868759,1.08175904567972,1.32920574457119,0.706765149637033,0.990688486514998,0.705783295957884,0.292373642219257,0.962118416403295,1.16876902181569,0,0.665957860122194,0.986852422704233,1.67884616364078,0.19318959403219,0.187682475451182,0,0,0,0.564751842617067,0,0,0.343706364687375,0,0,0,0.45032120322422,0,0,8.82192454465502,7.18244772121856,5.12200817262403,1.94485373654635,1.67690530102386,1.65459157605013,0.44449345560323,0.412070114477788,0.962757628775446,1.51618327058278,0.50695859978048,1.50901073108861,1.21733959710847,1.21647789569252,1.55075766180156,1.42888107384922,1.50649623728312,0.77163688185482,0.824171801606613,0.588795680537589,0.685738504770831,0.887379030796687,1.1921809497366,0.872078499793971,0.752875043322645,0.930760686808441,0.365855945745545,0,1.08643291076689,0,1.30498519936592,1.37906275325789,0.818462086339379,1.08455788830176,1.15743966588685,2.74791635731741,0.701794825336225,0.644613162144895,0.191288332068843,0.441182838239031,0.231867835620421 | |||
|short_description=p2@Rcor2 | |||
}} |
Revision as of 13:14, 4 August 2015
Short description: | p2@Rcor2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Rcor2_5end |
Coexpression cluster: | MCL_coexpression_mm9:1241 |
Association with transcript: | 0bp_to_ENSMUST00000066646_5end |
EntrezGene: | 104383 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuron | 4.49e-14 | 33 |
neuronal stem cell | 4.49e-14 | 33 |
neuroblast | 4.49e-14 | 33 |
electrically signaling cell | 4.49e-14 | 33 |
electrically responsive cell | 1.42e-10 | 39 |
electrically active cell | 1.42e-10 | 39 |
neural cell | 9.15e-10 | 43 |
ectodermal cell | 2.37e-09 | 44 |
neurectodermal cell | 2.37e-09 | 44 |
neuron of cerebral cortex | 4.40e-08 | 6 |
CNS neuron (sensu Vertebrata) | 7.60e-08 | 23 |
neuroblast (sensu Vertebrata) | 7.60e-08 | 23 |
autonomic neuron | 1.33e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
neurectoderm | 1.40e-08 | 64 |
neural plate | 1.40e-08 | 64 |
presumptive neural plate | 1.40e-08 | 64 |
ectoderm-derived structure | 4.55e-08 | 95 |
ectoderm | 4.55e-08 | 95 |
presumptive ectoderm | 4.55e-08 | 95 |
pre-chordal neural plate | 8.91e-08 | 49 |
central nervous system | 1.18e-07 | 73 |
autonomic nervous system | 1.33e-07 | 9 |
nervous system | 3.51e-07 | 75 |
ecto-epithelium | 7.35e-07 | 73 |