FFCP PHASE1:Mm9::chr9:110649683..110649695,-: Difference between revisions
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{{FFCP|EntrezGene=19228|HGNC=|MCL_coexpression_id=11|UniProt=P41593|association_with_transcript=-34bp_to_ENSMUST00000170668,NM_011199,uc009ruq.1_5end|description=CAGE_peak_10_at_Pth1r_5end|id=chr9:110649683..110649695,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000057,3.34e-12,1;CL:0000632,3.34e-12,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!3.74e-15!49;UBERON:0005173!3.74e-15!49;UBERON:0002417!3.74e-15!49;UBERON:0000916!3.74e-15!49;UBERON:0002113!2.41e-12!14;UBERON:0003918!2.41e-12!14;UBERON:0005095!2.41e-12!14;UBERON:0007687!2.41e-12!14;UBERON:0009569!1.56e-11!66;UBERON:0006554!1.25e-10!16;UBERON:0001008!6.36e-10!17;UBERON:0005177!5.09e-08!85;UBERON:0000489!8.98e-08!21;UBERON:0002107!3.26e-07!22;UBERON:0007499!3.26e-07!22;UBERON:0006925!3.26e-07!22;UBERON:0009497!3.26e-07!22;UBERON:0000015!3.26e-07!22;UBERON:0002423!3.26e-07!22;UBERON:0006235!3.26e-07!22;UBERON:0008835!3.26e-07!22;UBERON:0003894!3.26e-07!22;UBERON:0004161!3.26e-07!22;UBERON:0008836!3.26e-07!22;UBERON:0009854!7.66e-07!23;UBERON:0009856!7.66e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0002113,5.22e-20,14;UBERON:0003918,5.22e-20,14;UBERON:0011143,5.22e-20,14;UBERON:0005095,5.22e-20,14;UBERON:0007687,5.22e-20,14;UBERON:0006554,1.24e-15,18;UBERON:0001008,7.94e-15,19;UBERON:0005172,2.84e-14,49;UBERON:0005173,2.84e-14,49;UBERON:0002417,2.84e-14,49;UBERON:0000916,2.84e-14,49;UBERON:0000489,1.93e-13,21;UBERON:0003104,1.85e-11,61;UBERON:0009142,1.85e-11,61;UBERON:0009569,1.38e-10,66;UBERON:0005177,7.96e-09,79;UBERON:0002100,9.97e-08,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0.558365998002762,0,0,0,0,0,0,0,0,1.72084775396277,0,0,1.29955283489534,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.407302655690628,1.35766741017338,0.420814919341911,3.41477300470989,3.69025369949005,4.39596437955849,2.96153193412321,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,1.01031551178845,0.717589654087649,0.482443521363367,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p10@Pth1r}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:19228 | |||
|HGNC= | |||
|MCL_coexpression_id=11 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:P41593 | |||
|association_with_transcript=-34bp_to_ENSMUST00000170668,NM_011199,uc009ruq.1_5end | |||
|cluster_id=chr9:110649683..110649695,- | |||
|description=CAGE_peak_10_at_Pth1r_5end | |||
|id=chr9:110649683..110649695,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,3.34e-12,1;CL:0000632,3.34e-12,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!3.74e-15!49;UBERON:0005173!3.74e-15!49;UBERON:0002417!3.74e-15!49;UBERON:0000916!3.74e-15!49;UBERON:0002113!2.41e-12!14;UBERON:0003918!2.41e-12!14;UBERON:0005095!2.41e-12!14;UBERON:0007687!2.41e-12!14;UBERON:0009569!1.56e-11!66;UBERON:0006554!1.25e-10!16;UBERON:0001008!6.36e-10!17;UBERON:0005177!5.09e-08!85;UBERON:0000489!8.98e-08!21;UBERON:0002107!3.26e-07!22;UBERON:0007499!3.26e-07!22;UBERON:0006925!3.26e-07!22;UBERON:0009497!3.26e-07!22;UBERON:0000015!3.26e-07!22;UBERON:0002423!3.26e-07!22;UBERON:0006235!3.26e-07!22;UBERON:0008835!3.26e-07!22;UBERON:0003894!3.26e-07!22;UBERON:0004161!3.26e-07!22;UBERON:0008836!3.26e-07!22;UBERON:0009854!7.66e-07!23;UBERON:0009856!7.66e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,5.22e-20,14;UBERON:0003918,5.22e-20,14;UBERON:0011143,5.22e-20,14;UBERON:0005095,5.22e-20,14;UBERON:0007687,5.22e-20,14;UBERON:0006554,1.24e-15,18;UBERON:0001008,7.94e-15,19;UBERON:0005172,2.84e-14,49;UBERON:0005173,2.84e-14,49;UBERON:0002417,2.84e-14,49;UBERON:0000916,2.84e-14,49;UBERON:0000489,1.93e-13,21;UBERON:0003104,1.85e-11,61;UBERON:0009142,1.85e-11,61;UBERON:0009569,1.38e-10,66;UBERON:0005177,7.96e-09,79;UBERON:0002100,9.97e-08,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.935476191661768,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.131886287730194,0,0,0.558365998002762,0,0,0,0,0,0,0,0,1.72084775396277,0,0,1.29955283489534,0,0.983110940922263,0,0,0,0,0,0,0,0,0,0,0.79928715803342,0,0,0.173485326766136,0,0,0,0.117588707135705,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.114248512609729,0,0.407302655690628,1.35766741017338,0.420814919341911,3.41477300470989,3.69025369949005,4.39596437955849,2.96153193412321,0.592905254174298,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0.312037673114561,1.01031551178845,0.717589654087649,0.482443521363367,0,0,0,0.169745085775188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23467170806371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.120195449519969,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188626341386076,0,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p10@Pth1r | |||
}} |
Revision as of 15:17, 4 August 2015
Short description: | p10@Pth1r |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_10_at_Pth1r_5end |
Coexpression cluster: | MCL_coexpression_mm9:11 |
Association with transcript: | -34bp_to_ENSMUST00000170668, NM_011199, uc009ruq.1_5end |
EntrezGene: | 19228 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 3.34e-12 | 1 |
hepatic stellate cell | 3.34e-12 | 1 |
Ontology term | p-value | n |
---|---|---|
kidney | 5.22e-20 | 14 |
kidney mesenchyme | 5.22e-20 | 14 |
upper urinary tract | 5.22e-20 | 14 |
kidney rudiment | 5.22e-20 | 14 |
kidney field | 5.22e-20 | 14 |
urinary system structure | 1.24e-15 | 18 |
renal system | 7.94e-15 | 19 |
abdomen element | 2.84e-14 | 49 |
abdominal segment element | 2.84e-14 | 49 |
abdominal segment of trunk | 2.84e-14 | 49 |
abdomen | 2.84e-14 | 49 |
cavitated compound organ | 1.93e-13 | 21 |
mesenchyme | 1.85e-11 | 61 |
entire embryonic mesenchyme | 1.85e-11 | 61 |
subdivision of trunk | 1.38e-10 | 66 |
trunk region element | 7.96e-09 | 79 |
trunk | 9.97e-08 | 90 |