FFCP PHASE1:Mm9::chr4:119211745..119211756,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=88|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr4:119211745..119211756,+|id=chr4:119211745..119211756,+|ontology_enrichment_celltype=CL:0002563!4.81e-10!9;CL:0002251!4.81e-10!9;CL:0000239!9.43e-10!6;CL:0000677!9.43e-10!6;CL:0000212!9.43e-10!6;CL:0000584!9.43e-10!6;CL:0000075!3.49e-08!7;CL:0000066!1.06e-07!25|ontology_enrichment_celltype_v019_2=CL:0000682,1.11e-19,3;CL:0000239,1.71e-17,6;CL:0000677,1.71e-17,6;CL:0000584,1.71e-17,6;CL:0000075,4.89e-15,7;CL:0000066,4.80e-12,25;CL:0002563,9.36e-12,9;CL:0002251,9.36e-12,9;CL:0000473,9.05e-09,7;CL:0000057,1.33e-07,1;CL:0000632,1.33e-07,1;CL:0002076,3.93e-07,15|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!7.55e-16!43;UBERON:0000344!6.52e-15!15;UBERON:0005409!1.53e-14!59;UBERON:0001242!1.21e-12!13;UBERON:0000060!1.21e-12!13;UBERON:0001262!1.21e-12!13;UBERON:0004786!1.21e-12!13;UBERON:0001007!7.25e-12!128;UBERON:0001555!7.25e-12!128;UBERON:0007026!7.25e-12!128;UBERON:0004119!1.72e-11!130;UBERON:0000925!1.72e-11!130;UBERON:0006595!1.72e-11!130;UBERON:0004921!1.48e-10!126;UBERON:0004185!1.48e-10!126;UBERON:0004923!1.78e-10!24;UBERON:0003350!4.81e-10!9;UBERON:0004808!4.81e-10!9;UBERON:0001277!4.81e-10!9;UBERON:0000485!7.12e-08!11|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.58e-19,31;UBERON:0001242,1.81e-17,13;UBERON:0001262,1.81e-17,13;UBERON:0004786,1.81e-17,13;UBERON:0000344,4.18e-15,15;UBERON:0005409,2.22e-12,47;UBERON:0003350,9.36e-12,9;UBERON:0004808,9.36e-12,9;UBERON:0001277,9.36e-12,9;UBERON:0000485,1.17e-09,11;UBERON:0004923,2.52e-09,24;UBERON:0002108,3.18e-07,4|phase1_expression=0,1.74487703819681,1.36499771816861,8.16653370528441,7.01254021924886,0.503637815735669,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,0.45881856213434,2.8711598205751,2.15380998079537,1.07735616342945,1.52018735565099,0.504060259519861,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,1.72084775396277,0,0,0.649776417447669,0.896053774194671,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,1.58670339998127,0,0,0.128867461322093,0.80673409849337,0.667134131534611,0.760902504450237,0.949058123089023,0.823494773620054,1.50801125280162,0.596869416123452,0.779856348476481,0,0.864552199498777,1.1948476395262,0,0,0,0,0,0,0,0.295220295959204,0.470996183524124,0.123397163921801,0.889357881261447,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0,0,0.0574354689556133,0.476293691283074,0.231768651889711,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0,0,0,0.197008964751127,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0|short_description=p@chr4:119211745..119211756,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr4:119211745..119211756,+ | |||
|description=CAGE_peak_at_chr4:119211745..119211756,+ | |||
|id=chr4:119211745..119211756,+ | |||
|ontology_enrichment_celltype=CL:0002563!4.81e-10!9;CL:0002251!4.81e-10!9;CL:0000239!9.43e-10!6;CL:0000677!9.43e-10!6;CL:0000212!9.43e-10!6;CL:0000584!9.43e-10!6;CL:0000075!3.49e-08!7;CL:0000066!1.06e-07!25 | |||
|ontology_enrichment_celltype_v019_2=CL:0000682,1.11e-19,3;CL:0000239,1.71e-17,6;CL:0000677,1.71e-17,6;CL:0000584,1.71e-17,6;CL:0000075,4.89e-15,7;CL:0000066,4.80e-12,25;CL:0002563,9.36e-12,9;CL:0002251,9.36e-12,9;CL:0000473,9.05e-09,7;CL:0000057,1.33e-07,1;CL:0000632,1.33e-07,1;CL:0002076,3.93e-07,15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!7.55e-16!43;UBERON:0000344!6.52e-15!15;UBERON:0005409!1.53e-14!59;UBERON:0001242!1.21e-12!13;UBERON:0000060!1.21e-12!13;UBERON:0001262!1.21e-12!13;UBERON:0004786!1.21e-12!13;UBERON:0001007!7.25e-12!128;UBERON:0001555!7.25e-12!128;UBERON:0007026!7.25e-12!128;UBERON:0004119!1.72e-11!130;UBERON:0000925!1.72e-11!130;UBERON:0006595!1.72e-11!130;UBERON:0004921!1.48e-10!126;UBERON:0004185!1.48e-10!126;UBERON:0004923!1.78e-10!24;UBERON:0003350!4.81e-10!9;UBERON:0004808!4.81e-10!9;UBERON:0001277!4.81e-10!9;UBERON:0000485!7.12e-08!11 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.58e-19,31;UBERON:0001242,1.81e-17,13;UBERON:0001262,1.81e-17,13;UBERON:0004786,1.81e-17,13;UBERON:0000344,4.18e-15,15;UBERON:0005409,2.22e-12,47;UBERON:0003350,9.36e-12,9;UBERON:0004808,9.36e-12,9;UBERON:0001277,9.36e-12,9;UBERON:0000485,1.17e-09,11;UBERON:0004923,2.52e-09,24;UBERON:0002108,3.18e-07,4 | |||
|phase1_expression=0,1.74487703819681,1.36499771816861,8.16653370528441,7.01254021924886,0.503637815735669,0.934450562382103,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.799962113967033,0.45881856213434,2.8711598205751,2.15380998079537,1.07735616342945,1.52018735565099,0.504060259519861,0,0,0,0,0.288851619751275,0,0.204169356262369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.142371680799103,0,0,0,0,1.72084775396277,0,0,0.649776417447669,0.896053774194671,0,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0.173485326766136,0,0,0,0,0,0.247194967734374,0,0,0,0,0,0,0,0,0.255457055208591,0,0,0,0,0,0.125654352112864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.98251269790279,1.58670339998127,0,0,0.128867461322093,0.80673409849337,0.667134131534611,0.760902504450237,0.949058123089023,0.823494773620054,1.50801125280162,0.596869416123452,0.779856348476481,0,0.864552199498777,1.1948476395262,0,0,0,0,0,0,0,0.295220295959204,0.470996183524124,0.123397163921801,0.889357881261447,0,0.196558995113203,0,0,0,0,0,0,0.274561413188081,0,0.372140947668503,0.312037673114561,0.252578877947112,0.179397413521912,0.964887042726734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.234423373184406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.7488850197791,0,0,0,0,0,0.136694227721025,0,0,0,0,0,0,0.203319467126849,0.108005340821801,0,0.218362563746178,0,0,0,0.518459893167171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0,0.198681354781265,0,0,0.100966449948148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206035057238894,0,0,0.25347929989024,0.188626341386076,0,0,0.0574354689556133,0.476293691283074,0.231768651889711,0,0,0.147198920134397,0,0,0,0.145346416632329,0,0,0.182927972872773,0,0,0,0,0.197008964751127,0,0.154936841185966,0,0,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr4:119211745..119211756,+ | |||
}} |
Latest revision as of 16:11, 4 August 2015
Short description: | p@chr4:119211745..119211756, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr4:119211745..119211756, + |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
M cell of gut | 1.11e-19 | 3 |
brush border epithelial cell | 1.71e-17 | 6 |
gut absorptive cell | 1.71e-17 | 6 |
enterocyte | 1.71e-17 | 6 |
columnar/cuboidal epithelial cell | 4.89e-15 | 7 |
epithelial cell | 4.80e-12 | 25 |
intestinal epithelial cell | 9.36e-12 | 9 |
epithelial cell of alimentary canal | 9.36e-12 | 9 |
defensive cell | 9.05e-09 | 7 |
fibroblast | 1.33e-07 | 1 |
hepatic stellate cell | 1.33e-07 | 1 |
endo-epithelial cell | 3.93e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.58e-19 | 31 |
intestinal mucosa | 1.81e-17 | 13 |
wall of intestine | 1.81e-17 | 13 |
gastrointestinal system mucosa | 1.81e-17 | 13 |
mucosa | 4.18e-15 | 15 |
gastrointestinal system | 2.22e-12 | 47 |
epithelium of mucosa | 9.36e-12 | 9 |
gastrointestinal system epithelium | 9.36e-12 | 9 |
intestinal epithelium | 9.36e-12 | 9 |
simple columnar epithelium | 1.17e-09 | 11 |
organ component layer | 2.52e-09 | 24 |
small intestine | 3.18e-07 | 4 |