FFCP PHASE1:Mm9::chr17:35517348..35517380,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=38|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:35517348..35517380,+|id=chr17:35517348..35517380,+|ontology_enrichment_celltype=CL:0000548!1.04e-27!115;CL:0000004!1.04e-27!115;CL:0000255!1.04e-27!115;CL:0000144!7.88e-27!121;CL:0000012!7.88e-27!121;CL:0002371!2.59e-26!118;CL:0000723!1.00e-18!91;CL:0000048!1.00e-18!91;CL:0000034!7.05e-18!97;CL:0000063!7.89e-16!66;CL:0000219!1.16e-15!54;CL:0002321!6.39e-14!70;CL:0000220!6.39e-14!70;CL:0000055!2.60e-12!50;CL:0002320!4.13e-12!46;CL:0000134!4.13e-12!46;CL:0002031!1.59e-11!25;CL:0000738!1.92e-10!17;CL:0002087!1.92e-10!17;CL:0000988!7.14e-10!32;CL:0002032!7.14e-10!32;CL:0000037!7.14e-10!32;CL:0000566!7.14e-10!32;CL:0000837!7.14e-10!32;CL:0000221!2.30e-09!44;CL:0000133!2.30e-09!44;CL:0002319!3.88e-09!43;CL:0000393!4.30e-08!39;CL:0000211!4.30e-08!39;CL:0000838!9.25e-08!12;CL:0000084!3.26e-07!11;CL:0000827!3.26e-07!11;CL:0000542!6.83e-07!13;CL:0000051!6.83e-07!13|ontology_enrichment_celltype_v019_2=CL:0000473,6.02e-15,7;CL:0000239,3.57e-12,6;CL:0000677,3.57e-12,6;CL:0000584,3.57e-12,6;CL:0000219,5.17e-12,54;CL:0000738,4.45e-11,17;CL:0002087,4.45e-11,17;CL:0000680,1.20e-10,6;CL:0000187,1.20e-10,6;CL:0000056,1.20e-10,6;CL:0000075,2.56e-10,7;CL:0002194,1.10e-09,4;CL:0000766,1.10e-09,4;CL:0000234,1.10e-09,4;CL:0000576,1.10e-09,4;CL:0000235,1.10e-09,4;CL:0000864,1.10e-09,4;CL:0002009,1.10e-09,4;CL:0000040,1.10e-09,4;CL:0000559,1.10e-09,4;CL:0002320,1.70e-09,46;CL:0000134,1.70e-09,46;CL:0000066,2.96e-09,25;CL:0000624,4.83e-09,8;CL:0000222,4.98e-09,7;CL:0002453,2.32e-08,8;CL:0002321,3.42e-08,70;CL:0000723,5.42e-08,91;CL:0000048,5.42e-08,91;CL:0000791,6.03e-08,9;CL:0000789,6.03e-08,9;CL:0002420,6.03e-08,9;CL:0002419,6.03e-08,9;CL:0000790,6.03e-08,9;CL:0002092,6.11e-08,3;CL:0002540,6.11e-08,3;CL:0002563,7.61e-08,9;CL:0002251,7.61e-08,9;CL:0000034,3.88e-07,97;CL:0000355,7.11e-07,9;CL:0000682,7.13e-07,3;CL:0002031,7.84e-07,25|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002384!4.13e-12!46;UBERON:0002371!5.84e-09!16;UBERON:0002204!1.37e-08!32;UBERON:0002193!6.53e-08!48;UBERON:0000344!7.32e-08!15;UBERON:0001474!5.17e-07!22;UBERON:0004765!5.17e-07!22;UBERON:0001434!5.17e-07!22|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.08e-14,15;UBERON:0001242,1.33e-11,13;UBERON:0001262,1.33e-11,13;UBERON:0004786,1.33e-11,13;UBERON:0002204,1.28e-09,32;UBERON:0002384,1.70e-09,46;UBERON:0004923,2.94e-08,24;UBERON:0000485,3.58e-08,11;UBERON:0003350,7.61e-08,9;UBERON:0004808,7.61e-08,9;UBERON:0001277,7.61e-08,9;UBERON:0007524,2.88e-07,11;UBERON:0003077,2.88e-07,11;UBERON:0007285,2.88e-07,11;UBERON:0000331,5.40e-07,3;UBERON:0002116,5.40e-07,3;UBERON:0001204,5.40e-07,3;UBERON:0001168,5.40e-07,3;UBERON:0001134,7.11e-07,9;UBERON:0002036,7.11e-07,9;UBERON:0002385,7.11e-07,9;UBERON:0000486,7.11e-07,9;UBERON:0007503,7.11e-07,9;UBERON:0001015,7.11e-07,9;UBERON:0002329,7.11e-07,9;UBERON:0003082,7.11e-07,9;UBERON:0003059,7.11e-07,9;UBERON:0007282,7.11e-07,9;UBERON:0004290,7.11e-07,9;UBERON:0009618,7.11e-07,9|phase1_expression=1.28119077683835,4.88565570695105,6.3699893514535,6.0492842261366,5.50985302940982,2.01455126294268,3.03696432774183,9.16775596435192,1.54867594366833,17.0867104215055,0,3.90883579077148,0.684802919724823,6.90621179110079,0.333109761815663,0.404950534779652,0.699561878128147,0.473193248037357,0.548457734422955,0.42438965179803,3.91199134694921,0.198581902401771,0.522399578277871,3.67982572424835,2.75291137280604,3.44539178469012,4.30761996159075,5.60225204983311,7.9809836171677,6.30075324399827,1.99557459589774,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,2.14024590558481,2.73717714292689,1.28482726513177,3.9119567217402,0.436050312760893,1.31811709640683,1.55543919259427,1.39986421625363,0,0.671130424230945,2.17608642603403,0.672187598284928,1.28629718017973,2.0057340795713,3.6097046459421,0.606949382578793,0,0,0,0,26.5470416598013,22.7439263390404,29.8401648277362,6.2916023208865,6.91592949578798,0.414758449233911,0.675029691658453,0,0.285650984403804,0.883474163806454,0.122490799214954,0.287536413054709,0.919218786610021,0,0.510749352340751,0.307213066512487,0.527545150920775,0.548925861614458,0.52091337055676,0.558365998002762,0.56276261003168,0.30559649555362,0.294628585473668,0,0.745597783301202,0.530083353332288,0.604572480854284,0,0,6.11974200336975,2.15881276655127,0,0,0.983110940922263,0.511290967734173,1.03914401841148,1.7666978725517,0.14084341977668,0,0,0,0,0,0,1.7127581957859,0.258937883647172,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0.44292937929755,0,0.327726629431476,0.172684981865896,0,46.7452980211744,14.1415477792864,0,0,0,0,1.14754461763673,0,1.26203287766503,0,0,0,0.668396022247182,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0,0,0.291480836629851,0,0,0,0,0,0.27338845544205,0,0,0.139951452323658,0.552799895217695,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0.316011120628178,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0.228620419965,0.100826185136841,0.292373642219257,0,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr17:35517348..35517380,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=38 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:35517348..35517380,+ | |||
|description=CAGE_peak_at_chr17:35517348..35517380,+ | |||
|id=chr17:35517348..35517380,+ | |||
|ontology_enrichment_celltype=CL:0000548!1.04e-27!115;CL:0000004!1.04e-27!115;CL:0000255!1.04e-27!115;CL:0000144!7.88e-27!121;CL:0000012!7.88e-27!121;CL:0002371!2.59e-26!118;CL:0000723!1.00e-18!91;CL:0000048!1.00e-18!91;CL:0000034!7.05e-18!97;CL:0000063!7.89e-16!66;CL:0000219!1.16e-15!54;CL:0002321!6.39e-14!70;CL:0000220!6.39e-14!70;CL:0000055!2.60e-12!50;CL:0002320!4.13e-12!46;CL:0000134!4.13e-12!46;CL:0002031!1.59e-11!25;CL:0000738!1.92e-10!17;CL:0002087!1.92e-10!17;CL:0000988!7.14e-10!32;CL:0002032!7.14e-10!32;CL:0000037!7.14e-10!32;CL:0000566!7.14e-10!32;CL:0000837!7.14e-10!32;CL:0000221!2.30e-09!44;CL:0000133!2.30e-09!44;CL:0002319!3.88e-09!43;CL:0000393!4.30e-08!39;CL:0000211!4.30e-08!39;CL:0000838!9.25e-08!12;CL:0000084!3.26e-07!11;CL:0000827!3.26e-07!11;CL:0000542!6.83e-07!13;CL:0000051!6.83e-07!13 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,6.02e-15,7;CL:0000239,3.57e-12,6;CL:0000677,3.57e-12,6;CL:0000584,3.57e-12,6;CL:0000219,5.17e-12,54;CL:0000738,4.45e-11,17;CL:0002087,4.45e-11,17;CL:0000680,1.20e-10,6;CL:0000187,1.20e-10,6;CL:0000056,1.20e-10,6;CL:0000075,2.56e-10,7;CL:0002194,1.10e-09,4;CL:0000766,1.10e-09,4;CL:0000234,1.10e-09,4;CL:0000576,1.10e-09,4;CL:0000235,1.10e-09,4;CL:0000864,1.10e-09,4;CL:0002009,1.10e-09,4;CL:0000040,1.10e-09,4;CL:0000559,1.10e-09,4;CL:0002320,1.70e-09,46;CL:0000134,1.70e-09,46;CL:0000066,2.96e-09,25;CL:0000624,4.83e-09,8;CL:0000222,4.98e-09,7;CL:0002453,2.32e-08,8;CL:0002321,3.42e-08,70;CL:0000723,5.42e-08,91;CL:0000048,5.42e-08,91;CL:0000791,6.03e-08,9;CL:0000789,6.03e-08,9;CL:0002420,6.03e-08,9;CL:0002419,6.03e-08,9;CL:0000790,6.03e-08,9;CL:0002092,6.11e-08,3;CL:0002540,6.11e-08,3;CL:0002563,7.61e-08,9;CL:0002251,7.61e-08,9;CL:0000034,3.88e-07,97;CL:0000355,7.11e-07,9;CL:0000682,7.13e-07,3;CL:0002031,7.84e-07,25 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002384!4.13e-12!46;UBERON:0002371!5.84e-09!16;UBERON:0002204!1.37e-08!32;UBERON:0002193!6.53e-08!48;UBERON:0000344!7.32e-08!15;UBERON:0001474!5.17e-07!22;UBERON:0004765!5.17e-07!22;UBERON:0001434!5.17e-07!22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.08e-14,15;UBERON:0001242,1.33e-11,13;UBERON:0001262,1.33e-11,13;UBERON:0004786,1.33e-11,13;UBERON:0002204,1.28e-09,32;UBERON:0002384,1.70e-09,46;UBERON:0004923,2.94e-08,24;UBERON:0000485,3.58e-08,11;UBERON:0003350,7.61e-08,9;UBERON:0004808,7.61e-08,9;UBERON:0001277,7.61e-08,9;UBERON:0007524,2.88e-07,11;UBERON:0003077,2.88e-07,11;UBERON:0007285,2.88e-07,11;UBERON:0000331,5.40e-07,3;UBERON:0002116,5.40e-07,3;UBERON:0001204,5.40e-07,3;UBERON:0001168,5.40e-07,3;UBERON:0001134,7.11e-07,9;UBERON:0002036,7.11e-07,9;UBERON:0002385,7.11e-07,9;UBERON:0000486,7.11e-07,9;UBERON:0007503,7.11e-07,9;UBERON:0001015,7.11e-07,9;UBERON:0002329,7.11e-07,9;UBERON:0003082,7.11e-07,9;UBERON:0003059,7.11e-07,9;UBERON:0007282,7.11e-07,9;UBERON:0004290,7.11e-07,9;UBERON:0009618,7.11e-07,9 | |||
|phase1_expression=1.28119077683835,4.88565570695105,6.3699893514535,6.0492842261366,5.50985302940982,2.01455126294268,3.03696432774183,9.16775596435192,1.54867594366833,17.0867104215055,0,3.90883579077148,0.684802919724823,6.90621179110079,0.333109761815663,0.404950534779652,0.699561878128147,0.473193248037357,0.548457734422955,0.42438965179803,3.91199134694921,0.198581902401771,0.522399578277871,3.67982572424835,2.75291137280604,3.44539178469012,4.30761996159075,5.60225204983311,7.9809836171677,6.30075324399827,1.99557459589774,0,0,0,0.288851619751275,0,0,0,0,0,0,0,0,2.14024590558481,2.73717714292689,1.28482726513177,3.9119567217402,0.436050312760893,1.31811709640683,1.55543919259427,1.39986421625363,0,0.671130424230945,2.17608642603403,0.672187598284928,1.28629718017973,2.0057340795713,3.6097046459421,0.606949382578793,0,0,0,0,26.5470416598013,22.7439263390404,29.8401648277362,6.2916023208865,6.91592949578798,0.414758449233911,0.675029691658453,0,0.285650984403804,0.883474163806454,0.122490799214954,0.287536413054709,0.919218786610021,0,0.510749352340751,0.307213066512487,0.527545150920775,0.548925861614458,0.52091337055676,0.558365998002762,0.56276261003168,0.30559649555362,0.294628585473668,0,0.745597783301202,0.530083353332288,0.604572480854284,0,0,6.11974200336975,2.15881276655127,0,0,0.983110940922263,0.511290967734173,1.03914401841148,1.7666978725517,0.14084341977668,0,0,0,0,0,0,1.7127581957859,0.258937883647172,0.148442139064825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.239630249011841,0,0.254140454146129,0,0,0,0,0,0,0,0,0,0,0,0,0.229902104433473,0,0,0,0,0,0,0,0,0,0,0,0,0.205782136407943,0,0,0,0.284163499395593,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219550115291051,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199141273254367,0,0,0,0,0,0,0.0632365371242573,0,0.156998727841375,0.123397163921801,0,0,0,0,0,0,0,0,0.162135226775035,0,0,0,0,0,0,0,0.369506380333209,0,0,0,0,0.335012514883631,0,0,0.157635144106191,0.44292937929755,0,0.327726629431476,0.172684981865896,0,46.7452980211744,14.1415477792864,0,0,0,0,1.14754461763673,0,1.26203287766503,0,0,0,0.668396022247182,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0,0,0,0.164549020602121,0,0,0,0,0.16488625294148,0,0,0,0,0.291480836629851,0,0,0,0,0,0.27338845544205,0,0,0.139951452323658,0.552799895217695,0,0,0,0,0,0.218362563746178,0,0,0,0,0,0,0,0,0,0.129159823477731,0,0.117357238645754,0,0,0,0,0.316011120628178,0,0,0.129920822977795,0,0,0.120195449519969,0,0,0.228620419965,0.100826185136841,0.292373642219257,0,0.467507608726276,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0936415074698824,0,0,0,0,0,0,0.147198920134397,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr17:35517348..35517380,+ | |||
}} |
Latest revision as of 19:34, 4 August 2015
Short description: | p@chr17:35517348..35517380, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:35517348..35517380, + |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mucosa | 1.08e-14 | 15 |
intestinal mucosa | 1.33e-11 | 13 |
wall of intestine | 1.33e-11 | 13 |
gastrointestinal system mucosa | 1.33e-11 | 13 |
musculoskeletal system | 1.28e-09 | 32 |
connective tissue | 1.70e-09 | 46 |
organ component layer | 2.94e-08 | 24 |
simple columnar epithelium | 3.58e-08 | 11 |
epithelium of mucosa | 7.61e-08 | 9 |
gastrointestinal system epithelium | 7.61e-08 | 9 |
intestinal epithelium | 7.61e-08 | 9 |
dense mesenchyme tissue | 2.88e-07 | 11 |
paraxial mesoderm | 2.88e-07 | 11 |
presumptive paraxial mesoderm | 2.88e-07 | 11 |
ileal mucosa | 5.40e-07 | 3 |
ileum | 5.40e-07 | 3 |
mucosa of small intestine | 5.40e-07 | 3 |
wall of small intestine | 5.40e-07 | 3 |
skeletal muscle tissue | 7.11e-07 | 9 |
striated muscle tissue | 7.11e-07 | 9 |
muscle tissue | 7.11e-07 | 9 |
multilaminar epithelium | 7.11e-07 | 9 |
epithelial vesicle | 7.11e-07 | 9 |
musculature | 7.11e-07 | 9 |
somite | 7.11e-07 | 9 |
myotome | 7.11e-07 | 9 |
presomitic mesoderm | 7.11e-07 | 9 |
presumptive segmental plate | 7.11e-07 | 9 |
dermomyotome | 7.11e-07 | 9 |
trunk paraxial mesoderm | 7.11e-07 | 9 |