FFCP PHASE1:Mm9::chr17:46575420..46575430,-: Difference between revisions
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{{FFCP|EntrezGene=108114|HGNC=|MCL_coexpression_id=8|UniProt=Q91WU2|association_with_transcript=0bp_to_ENSMUST00000087012,NM_144856,uc008csw.2_5end|description=CAGE_peak_3_at_Slc22a7_5end|id=chr17:46575420..46575430,-|ontology_enrichment_celltype=CL:0000181!1.84e-13!5;CL:0000417!1.84e-13!5;CL:0000668!1.84e-13!5;CL:0000412!1.84e-13!5;CL:0000182!1.84e-13!5|ontology_enrichment_celltype_v019_2=CL:0000182,1.74e-19,5;CL:0000057,3.20e-07,1;CL:0000632,3.20e-07,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002107!5.43e-29!22;UBERON:0007499!5.43e-29!22;UBERON:0006925!5.43e-29!22;UBERON:0009497!5.43e-29!22;UBERON:0000015!5.43e-29!22;UBERON:0002423!5.43e-29!22;UBERON:0006235!5.43e-29!22;UBERON:0008835!5.43e-29!22;UBERON:0003894!5.43e-29!22;UBERON:0004161!5.43e-29!22;UBERON:0008836!5.43e-29!22;UBERON:0009854!1.25e-27!23;UBERON:0009856!1.25e-27!23;UBERON:0002365!3.10e-25!25;UBERON:0002330!3.10e-25!25;UBERON:0005172!1.26e-20!49;UBERON:0005173!1.26e-20!49;UBERON:0002417!1.26e-20!49;UBERON:0000916!1.26e-20!49;UBERON:0009569!1.58e-14!66;UBERON:0003914!2.55e-12!47;UBERON:0005256!2.55e-12!47;UBERON:0005057!3.62e-11!51;UBERON:0005177!1.38e-10!85;UBERON:0003929!3.50e-10!55;UBERON:0002368!3.91e-09!60;UBERON:0002100!9.09e-09!98;UBERON:0002530!3.00e-08!65;UBERON:0000490!4.35e-08!66;UBERON:0005911!1.24e-07!69;UBERON:0002405!1.72e-07!70;UBERON:0000466!1.77e-07!79;UBERON:0000949!3.24e-07!72|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.18e-32,22;UBERON:0007499,9.18e-32,22;UBERON:0006925,9.18e-32,22;UBERON:0009497,9.18e-32,22;UBERON:0000015,9.18e-32,22;UBERON:0002423,9.18e-32,22;UBERON:0006235,9.18e-32,22;UBERON:0008835,9.18e-32,22;UBERON:0003894,9.18e-32,22;UBERON:0004161,9.18e-32,22;UBERON:0008836,9.18e-32,22;UBERON:0009854,2.48e-30,23;UBERON:0009856,2.48e-30,23;UBERON:0002365,8.23e-28,25;UBERON:0002330,8.23e-28,25;UBERON:0005172,4.19e-19,49;UBERON:0005173,4.19e-19,49;UBERON:0002417,4.19e-19,49;UBERON:0000916,4.19e-19,49;UBERON:0003104,4.76e-15,61;UBERON:0009142,4.76e-15,61;UBERON:0005256,6.89e-15,45;UBERON:0003914,3.38e-14,47;UBERON:0009569,8.62e-14,66;UBERON:0003929,6.18e-12,55;UBERON:0005177,2.93e-11,79;UBERON:0002368,7.96e-11,60;UBERON:0002530,6.95e-10,65;UBERON:0000490,1.03e-09,66;UBERON:0002100,1.11e-09,90;UBERON:0005911,3.14e-09,69;UBERON:0000949,8.75e-09,72;UBERON:0001041,9.24e-08,80|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,6.79971333707751,9.17495425784289,1.94932925234301,1.79210754838934,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.590440591918409,1.8839847340965,1.85095745882701,0.889357881261447,0,0,0,0,0,0,0,0,0.274561413188081,2.87536413054709,2.97712758134803,6.55279113540577,6.81962970457202,3.22915344339442,1.92977408545347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887943813496259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p3@Slc22a7}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:108114 | |||
|HGNC= | |||
|MCL_coexpression_id=8 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q91WU2 | |||
|association_with_transcript=0bp_to_ENSMUST00000087012,NM_144856,uc008csw.2_5end | |||
|cluster_id=chr17:46575420..46575430,- | |||
|description=CAGE_peak_3_at_Slc22a7_5end | |||
|id=chr17:46575420..46575430,- | |||
|ontology_enrichment_celltype=CL:0000181!1.84e-13!5;CL:0000417!1.84e-13!5;CL:0000668!1.84e-13!5;CL:0000412!1.84e-13!5;CL:0000182!1.84e-13!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,1.74e-19,5;CL:0000057,3.20e-07,1;CL:0000632,3.20e-07,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002107!5.43e-29!22;UBERON:0007499!5.43e-29!22;UBERON:0006925!5.43e-29!22;UBERON:0009497!5.43e-29!22;UBERON:0000015!5.43e-29!22;UBERON:0002423!5.43e-29!22;UBERON:0006235!5.43e-29!22;UBERON:0008835!5.43e-29!22;UBERON:0003894!5.43e-29!22;UBERON:0004161!5.43e-29!22;UBERON:0008836!5.43e-29!22;UBERON:0009854!1.25e-27!23;UBERON:0009856!1.25e-27!23;UBERON:0002365!3.10e-25!25;UBERON:0002330!3.10e-25!25;UBERON:0005172!1.26e-20!49;UBERON:0005173!1.26e-20!49;UBERON:0002417!1.26e-20!49;UBERON:0000916!1.26e-20!49;UBERON:0009569!1.58e-14!66;UBERON:0003914!2.55e-12!47;UBERON:0005256!2.55e-12!47;UBERON:0005057!3.62e-11!51;UBERON:0005177!1.38e-10!85;UBERON:0003929!3.50e-10!55;UBERON:0002368!3.91e-09!60;UBERON:0002100!9.09e-09!98;UBERON:0002530!3.00e-08!65;UBERON:0000490!4.35e-08!66;UBERON:0005911!1.24e-07!69;UBERON:0002405!1.72e-07!70;UBERON:0000466!1.77e-07!79;UBERON:0000949!3.24e-07!72 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,9.18e-32,22;UBERON:0007499,9.18e-32,22;UBERON:0006925,9.18e-32,22;UBERON:0009497,9.18e-32,22;UBERON:0000015,9.18e-32,22;UBERON:0002423,9.18e-32,22;UBERON:0006235,9.18e-32,22;UBERON:0008835,9.18e-32,22;UBERON:0003894,9.18e-32,22;UBERON:0004161,9.18e-32,22;UBERON:0008836,9.18e-32,22;UBERON:0009854,2.48e-30,23;UBERON:0009856,2.48e-30,23;UBERON:0002365,8.23e-28,25;UBERON:0002330,8.23e-28,25;UBERON:0005172,4.19e-19,49;UBERON:0005173,4.19e-19,49;UBERON:0002417,4.19e-19,49;UBERON:0000916,4.19e-19,49;UBERON:0003104,4.76e-15,61;UBERON:0009142,4.76e-15,61;UBERON:0005256,6.89e-15,45;UBERON:0003914,3.38e-14,47;UBERON:0009569,8.62e-14,66;UBERON:0003929,6.18e-12,55;UBERON:0005177,2.93e-11,79;UBERON:0002368,7.96e-11,60;UBERON:0002530,6.95e-10,65;UBERON:0000490,1.03e-09,66;UBERON:0002100,1.11e-09,90;UBERON:0005911,3.14e-09,69;UBERON:0000949,8.75e-09,72;UBERON:0001041,9.24e-08,80 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.10556277196391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.58127163094416,6.79971333707751,9.17495425784289,1.94932925234301,1.79210754838934,0.421333260395256,0,0,0,0,0,0,0,0,0,0,1.37020655662872,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0632365371242573,0.590440591918409,1.8839847340965,1.85095745882701,0.889357881261447,0,0,0,0,0,0,0,0,0.274561413188081,2.87536413054709,2.97712758134803,6.55279113540577,6.81962970457202,3.22915344339442,1.92977408545347,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0826534557253359,0,0,0,0,0,0,0,0,0,0,0.13020438484395,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.887943813496259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p3@Slc22a7 | |||
}} |
Revision as of 23:34, 4 August 2015
Short description: | p3@Slc22a7 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Slc22a7_5end |
Coexpression cluster: | MCL_coexpression_mm9:8 |
Association with transcript: | 0bp_to_ENSMUST00000087012, NM_144856, uc008csw.2_5end |
EntrezGene: | 108114 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 1.74e-19 | 5 |
fibroblast | 3.20e-07 | 1 |
hepatic stellate cell | 3.20e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 9.18e-32 | 22 |
epithelial sac | 9.18e-32 | 22 |
digestive gland | 9.18e-32 | 22 |
epithelium of foregut-midgut junction | 9.18e-32 | 22 |
anatomical boundary | 9.18e-32 | 22 |
hepatobiliary system | 9.18e-32 | 22 |
foregut-midgut junction | 9.18e-32 | 22 |
hepatic diverticulum | 9.18e-32 | 22 |
liver primordium | 9.18e-32 | 22 |
septum transversum | 9.18e-32 | 22 |
liver bud | 9.18e-32 | 22 |
digestive tract diverticulum | 2.48e-30 | 23 |
sac | 2.48e-30 | 23 |
exocrine gland | 8.23e-28 | 25 |
exocrine system | 8.23e-28 | 25 |
abdomen element | 4.19e-19 | 49 |
abdominal segment element | 4.19e-19 | 49 |
abdominal segment of trunk | 4.19e-19 | 49 |
abdomen | 4.19e-19 | 49 |
mesenchyme | 4.76e-15 | 61 |
entire embryonic mesenchyme | 4.76e-15 | 61 |
trunk mesenchyme | 6.89e-15 | 45 |
epithelial tube | 3.38e-14 | 47 |
subdivision of trunk | 8.62e-14 | 66 |
gut epithelium | 6.18e-12 | 55 |
trunk region element | 2.93e-11 | 79 |
endocrine gland | 7.96e-11 | 60 |
gland | 6.95e-10 | 65 |
unilaminar epithelium | 1.03e-09 | 66 |
trunk | 1.11e-09 | 90 |
endo-epithelium | 3.14e-09 | 69 |
endocrine system | 8.75e-09 | 72 |
foregut | 9.24e-08 | 80 |