FFCP PHASE1:Mm9::chr17:5012841..5012852,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=2164|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr17:5012841..5012852,+|id=chr17:5012841..5012852,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000239,1.32e-12,6;CL:0000677,1.32e-12,6;CL:0000584,1.32e-12,6;CL:0000075,6.79e-11,7;CL:0002563,1.33e-08,9;CL:0002251,1.33e-08,9|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000160!3.41e-14!43;UBERON:0005409!3.61e-09!59;UBERON:0004119!9.37e-09!130;UBERON:0000925!9.37e-09!130;UBERON:0006595!9.37e-09!130;UBERON:0001007!2.75e-08!128;UBERON:0001555!2.75e-08!128;UBERON:0007026!2.75e-08!128;UBERON:0000344!3.05e-08!15;UBERON:0004921!2.35e-07!126;UBERON:0004185!2.35e-07!126|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.77e-20,31;UBERON:0005409,3.45e-13,47;UBERON:0004923,6.67e-12,24;UBERON:0005631,1.07e-11,3;UBERON:0000478,1.07e-11,3;UBERON:0000158,1.07e-11,3;UBERON:0001242,3.26e-10,13;UBERON:0001262,3.26e-10,13;UBERON:0004786,3.26e-10,13;UBERON:0000305,9.82e-10,1;UBERON:0000344,6.88e-09,15;UBERON:0003350,1.33e-08,9;UBERON:0004808,1.33e-08,9;UBERON:0001277,1.33e-08,9;UBERON:0000485,3.90e-07,11|phase1_expression=0,1.04692622291808,0.909998478779072,2.41971369045464,2.00358291978539,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0,0.760093677825496,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,4.94389935468748,0,0,0,0,0,0,0,0.209446706813455,0.766371165625774,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,1.32225283331772,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.570676878337677,1.89811624617805,0.658795818896044,0.754005626400808,0.795825888164603,0.58489226135736,2.69645822596266,1.29682829924817,0.199141273254367,0,0,0,0,0,0,0,0,0.156998727841375,0.246794327843601,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0.757736633841335,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0591603543191,0,0,0.161464426695906,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0.240390899039938,0.147689527174577,0.302899349844443,0.228620419965,0.403304740547362,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0.618105171716683,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0,0|short_description=p@chr17:5012841..5012852,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=2164 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr17:5012841..5012852,+ | |||
|description=CAGE_peak_at_chr17:5012841..5012852,+ | |||
|id=chr17:5012841..5012852,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000239,1.32e-12,6;CL:0000677,1.32e-12,6;CL:0000584,1.32e-12,6;CL:0000075,6.79e-11,7;CL:0002563,1.33e-08,9;CL:0002251,1.33e-08,9 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000160!3.41e-14!43;UBERON:0005409!3.61e-09!59;UBERON:0004119!9.37e-09!130;UBERON:0000925!9.37e-09!130;UBERON:0006595!9.37e-09!130;UBERON:0001007!2.75e-08!128;UBERON:0001555!2.75e-08!128;UBERON:0007026!2.75e-08!128;UBERON:0000344!3.05e-08!15;UBERON:0004921!2.35e-07!126;UBERON:0004185!2.35e-07!126 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000160,2.77e-20,31;UBERON:0005409,3.45e-13,47;UBERON:0004923,6.67e-12,24;UBERON:0005631,1.07e-11,3;UBERON:0000478,1.07e-11,3;UBERON:0000158,1.07e-11,3;UBERON:0001242,3.26e-10,13;UBERON:0001262,3.26e-10,13;UBERON:0004786,3.26e-10,13;UBERON:0000305,9.82e-10,1;UBERON:0000344,6.88e-09,15;UBERON:0003350,1.33e-08,9;UBERON:0004808,1.33e-08,9;UBERON:0001277,1.33e-08,9;UBERON:0000485,3.90e-07,11 | |||
|phase1_expression=0,1.04692622291808,0.909998478779072,2.41971369045464,2.00358291978539,0.33575854382378,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.159992422793407,0.22940928106717,0,0.430761996159075,0,0.760093677825496,0.504060259519861,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336093799142464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.649776417447669,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0,0,0,0,0,0,0,0,4.94389935468748,0,0,0,0,0,0,0,0.209446706813455,0.766371165625774,0,0,0,0.149790639404823,0,0,0.173824320192276,0,0.20778804455956,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189106080167819,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.31293148088659,1.32225283331772,0,0,0.128867461322093,0.201683524623343,0.22237804384487,0.570676878337677,1.89811624617805,0.658795818896044,0.754005626400808,0.795825888164603,0.58489226135736,2.69645822596266,1.29682829924817,0.199141273254367,0,0,0,0,0,0,0,0,0.156998727841375,0.246794327843601,0,0,0,0,0.202860121388503,0,0,0.287696137450811,0,0,0,0,0,0.757736633841335,0.179397413521912,0.482443521363367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516856586336442,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0591603543191,0,0,0.161464426695906,0,0,0,1.1659233465194,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102710957164827,0,0.179026695667481,0,0.240390899039938,0.147689527174577,0.302899349844443,0.228620419965,0.403304740547362,0.194915761479505,0.0962118416403295,0,0,0,0,0,0,0,0,0,0,0,0,0.572895513439397,0,0,0,0,0.45032120322422,0,0,0,0,0,0,0.209613162627982,0.183843508450014,0,0.618105171716683,0,0,0,0,0.0936415074698824,0.0640251524048693,0,0,0,0,0,0.147198920134397,0,0,0,0.145346416632329,0.0941093804153306,0.0846146078916765,0.182927972872773,0,0,0,0.118635018124174,0,0,0,0.192906610981141,0.249810577937946,0.233931608445408,0,0,0,0 | |||
|short_description=p@chr17:5012841..5012852,+ | |||
}} |
Latest revision as of 01:40, 5 August 2015
Short description: | p@chr17:5012841..5012852, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:5012841..5012852, + |
Coexpression cluster: | MCL_coexpression_mm9:2164 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
brush border epithelial cell | 1.32e-12 | 6 |
gut absorptive cell | 1.32e-12 | 6 |
enterocyte | 1.32e-12 | 6 |
columnar/cuboidal epithelial cell | 6.79e-11 | 7 |
intestinal epithelial cell | 1.33e-08 | 9 |
epithelial cell of alimentary canal | 1.33e-08 | 9 |
Ontology term | p-value | n |
---|---|---|
intestine | 2.77e-20 | 31 |
gastrointestinal system | 3.45e-13 | 47 |
organ component layer | 6.67e-12 | 24 |
extraembryonic membrane | 1.07e-11 | 3 |
extraembryonic structure | 1.07e-11 | 3 |
membranous layer | 1.07e-11 | 3 |
intestinal mucosa | 3.26e-10 | 13 |
wall of intestine | 3.26e-10 | 13 |
gastrointestinal system mucosa | 3.26e-10 | 13 |
amnion | 9.82e-10 | 1 |
mucosa | 6.88e-09 | 15 |
epithelium of mucosa | 1.33e-08 | 9 |
gastrointestinal system epithelium | 1.33e-08 | 9 |
intestinal epithelium | 1.33e-08 | 9 |
simple columnar epithelium | 3.90e-07 | 11 |