FFCP PHASE1:Mm9::chr10:96970387..96970403,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=98|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr10:96970387..96970403,+|id=chr10:96970387..96970403,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=CL:0000680,7.88e-16,6;CL:0000187,7.88e-16,6;CL:0000056,7.88e-16,6;CL:0000222,1.33e-13,7;CL:0000355,1.27e-10,9;CL:0000192,7.12e-09,3;CL:0000359,7.12e-09,3;CL:0002539,7.12e-09,3;CL:0000514,7.12e-09,3;CL:0002494,1.42e-08,3;CL:0000737,1.42e-08,3;CL:0000746,1.42e-08,3;CL:0000513,1.42e-08,3|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004535!7.01e-07!23;UBERON:0001009!7.01e-07!23|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.27e-10,9;UBERON:0002036,1.27e-10,9;UBERON:0002385,1.27e-10,9;UBERON:0000486,1.27e-10,9;UBERON:0007503,1.27e-10,9;UBERON:0001015,1.27e-10,9;UBERON:0002329,1.27e-10,9;UBERON:0003082,1.27e-10,9;UBERON:0003059,1.27e-10,9;UBERON:0007282,1.27e-10,9;UBERON:0004290,1.27e-10,9;UBERON:0009618,1.27e-10,9;UBERON:0000383,1.41e-09,10;UBERON:0001135,7.12e-09,3;UBERON:0004237,7.12e-09,3;UBERON:0004695,7.12e-09,3;UBERON:0002111,7.12e-09,3;UBERON:0004178,7.12e-09,3;UBERON:0007524,1.02e-08,11;UBERON:0003077,1.02e-08,11;UBERON:0007285,1.02e-08,11;UBERON:0005256,2.98e-07,45;UBERON:0006834,4.10e-07,1;UBERON:0000947,7.43e-07,4;UBERON:0001637,7.43e-07,4;UBERON:0004573,7.43e-07,4;UBERON:0003509,7.43e-07,4;UBERON:0004571,7.43e-07,4;UBERON:0010191,7.43e-07,4;UBERON:0004572,7.43e-07,4;UBERON:0001255,7.89e-07,1;UBERON:0001556,7.89e-07,1|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.42791226055906,7.09638518536602,0.367093504323363,0,0,0,0,0,0,0,0,0,0.514518872071894,1.71920063963254,2.06268836910977,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0,0,0,0.0755715601067855,0.289864488701678,0,0,0,0.649776417447669,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.517875767294343,0.29688427812965,0,0.304465478312141,0.461230994512117,0.150722640552623,0.352766121407114,0.251333182659351,0.247194967734374,0.578397427679647,0,0.647067399789637,0.220841518460394,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,1.42575109390443,0.124406970610093,0,0.210441855886474,0.130120442962704,0.459804208866946,0.540186389416048,0.150704817835715,0.408218994907967,0.12811372028485,0.187403449119458,0.517406741478031,0,0,0.351902248327898,0.219195732427575,1.39023624612799,0.696504333044333,1.23469281844766,0,0,0,0,0,0,0.540186184383045,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0.268273401399619,0.233530684734339,0.16455984991348,0.164167464079095,0.486412857275134,0.146199987425332,0.658650345873152,0.805238512562231,0,0,0,0.264450566663544,0,0,0.38660238396628,0.403367049246685,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,1.1270773567308,0.407302655690628,0.193952487167626,0.350679099451593,0.126473074248515,0.147610147979602,0.156998727841375,0.123397163921801,1.1858105083486,0,0,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0.972811360650212,0,2.87536413054709,0,0.312037673114561,0.505157755894224,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0,0.163863314715738,0.345369963731791,0,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0,0.327869890753351,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0.851640511249612,0.534196811001766,0.81443479676788,0.824850614862677,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,1.03135543248187,0.340439605753788,0,0,0.643011105094777,0.354680467284547,0.713475270408282,0.329098041204242,0.913394847343798,0.704015124191131,0.21183207086382,0.220528398054962,0.8244312647074,0.322928853391811,0.422190474497091,0.358117032009409,0.164140899745061,0.291480836629851,0,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0,0,0.540026704109006,0.418176592028937,0.436725127492355,0,0.165306911450672,0.523511883968059,0.388844919875379,0,0,0,0.165458490457098,0,0.516639293910924,0.675824501963113,0.352071715937262,0.911430693907651,0,0.241584120826006,0.288030006257865,0,0.202725215290164,0.513554785824136,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0.680191150845634,0,0,0,1.35232715822533,2.25218970541418,0.36630324853453,0.428736758158132,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.256100609619477,0.0574354689556133,0,0.115884325944855,0.38581844092741,0.412085900803307,0.294397840268795,1.02860775715625,0.532427418478012,1.1921809497366,0.436039249896986,0.188218760830661,0.169229215783353,0.365855945745545,0,0,0.561142271657738,0.118635018124174,0.29551344712669,0.409231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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=98 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:96970387..96970403,+ | |||
|description=CAGE_peak_at_chr10:96970387..96970403,+ | |||
|id=chr10:96970387..96970403,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2=CL:0000680,7.88e-16,6;CL:0000187,7.88e-16,6;CL:0000056,7.88e-16,6;CL:0000222,1.33e-13,7;CL:0000355,1.27e-10,9;CL:0000192,7.12e-09,3;CL:0000359,7.12e-09,3;CL:0002539,7.12e-09,3;CL:0000514,7.12e-09,3;CL:0002494,1.42e-08,3;CL:0000737,1.42e-08,3;CL:0000746,1.42e-08,3;CL:0000513,1.42e-08,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004535!7.01e-07!23;UBERON:0001009!7.01e-07!23 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001134,1.27e-10,9;UBERON:0002036,1.27e-10,9;UBERON:0002385,1.27e-10,9;UBERON:0000486,1.27e-10,9;UBERON:0007503,1.27e-10,9;UBERON:0001015,1.27e-10,9;UBERON:0002329,1.27e-10,9;UBERON:0003082,1.27e-10,9;UBERON:0003059,1.27e-10,9;UBERON:0007282,1.27e-10,9;UBERON:0004290,1.27e-10,9;UBERON:0009618,1.27e-10,9;UBERON:0000383,1.41e-09,10;UBERON:0001135,7.12e-09,3;UBERON:0004237,7.12e-09,3;UBERON:0004695,7.12e-09,3;UBERON:0002111,7.12e-09,3;UBERON:0004178,7.12e-09,3;UBERON:0007524,1.02e-08,11;UBERON:0003077,1.02e-08,11;UBERON:0007285,1.02e-08,11;UBERON:0005256,2.98e-07,45;UBERON:0006834,4.10e-07,1;UBERON:0000947,7.43e-07,4;UBERON:0001637,7.43e-07,4;UBERON:0004573,7.43e-07,4;UBERON:0003509,7.43e-07,4;UBERON:0004571,7.43e-07,4;UBERON:0010191,7.43e-07,4;UBERON:0004572,7.43e-07,4;UBERON:0001255,7.89e-07,1;UBERON:0001556,7.89e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17008658030214,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.42791226055906,7.09638518536602,0.367093504323363,0,0,0,0,0,0,0,0,0,0.514518872071894,1.71920063963254,2.06268836910977,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0.135005938331691,0,0,0,0,0.0958454710182364,0,0,0,0,0,0,0,0,0,0.15279824777681,0.294628585473668,0,0,0,0.0755715601067855,0.289864488701678,0,0,0,0.649776417447669,0,0.561777680527007,0,0,0,0,0,0,0,0,0,0,0.34255163915718,0.517875767294343,0.29688427812965,0,0.304465478312141,0.461230994512117,0.150722640552623,0.352766121407114,0.251333182659351,0.247194967734374,0.578397427679647,0,0.647067399789637,0.220841518460394,0.969750506270444,0,0,0,0,0,0,0,0,0,0,0.173824320192276,0,0,0,1.42575109390443,0.124406970610093,0,0.210441855886474,0.130120442962704,0.459804208866946,0.540186389416048,0.150704817835715,0.408218994907967,0.12811372028485,0.187403449119458,0.517406741478031,0,0,0.351902248327898,0.219195732427575,1.39023624612799,0.696504333044333,1.23469281844766,0,0,0,0,0,0,0.540186184383045,0.23674473558521,0.393528463494808,0.154267112887378,0.232533944750408,0.268273401399619,0.233530684734339,0.16455984991348,0.164167464079095,0.486412857275134,0.146199987425332,0.658650345873152,0.805238512562231,0,0,0,0.264450566663544,0,0,0.38660238396628,0.403367049246685,0.22237804384487,0.190225626112559,0,0.164698954724011,0,0,0.19496408711912,0,0.216138049874694,0,0,0.114248512609729,1.1270773567308,0.407302655690628,0.193952487167626,0.350679099451593,0.126473074248515,0.147610147979602,0.156998727841375,0.123397163921801,1.1858105083486,0,0,0.224862112384854,0,0,0.25462585178142,0.287696137450811,0.972811360650212,0,2.87536413054709,0,0.312037673114561,0.505157755894224,0,0,0,0,0,0,0,0,0.238043640886014,0,0,0.221464689648775,0,0.163863314715738,0.345369963731791,0,0,0,0.491764273019036,0.275936746304732,0.160550589987792,0,0.327869890753351,0.252470927204373,0,0,0,0,0,0,0,0,0,0.321321316421807,0.851640511249612,0.534196811001766,0.81443479676788,0.824850614862677,0,0,0.302323556964751,0,0.295301892880773,0.307435147943927,0,0.363533729477506,0,0.316036757935816,0,1.03135543248187,0.340439605753788,0,0,0.643011105094777,0.354680467284547,0.713475270408282,0.329098041204242,0.913394847343798,0.704015124191131,0.21183207086382,0.220528398054962,0.8244312647074,0.322928853391811,0.422190474497091,0.358117032009409,0.164140899745061,0.291480836629851,0,0.170870880797853,0.206386867963223,0,0,0.136694227721025,0,0,0,0,0.954670618015114,0,0,0.540026704109006,0.418176592028937,0.436725127492355,0,0.165306911450672,0.523511883968059,0.388844919875379,0,0,0,0.165458490457098,0,0.516639293910924,0.675824501963113,0.352071715937262,0.911430693907651,0,0.241584120826006,0.288030006257865,0,0.202725215290164,0.513554785824136,0,0,0,0,0.147689527174577,0,0.0762068066549998,0,0,0,0,0.680191150845634,0,0,0,1.35232715822533,2.25218970541418,0.36630324853453,0.428736758158132,0.501572104035363,0,0,0,0.171853182343688,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.222246727801615,0.412070114477788,0,0,0.25347929989024,0.188626341386076,0.187283014939765,0.256100609619477,0.0574354689556133,0,0.115884325944855,0.38581844092741,0.412085900803307,0.294397840268795,1.02860775715625,0.532427418478012,1.1921809497366,0.436039249896986,0.188218760830661,0.169229215783353,0.365855945745545,0,0,0.561142271657738,0.118635018124174,0.29551344712669,0.409231043169689,0.309873682371932,0.771626443924566,0.749431733813838,0.233931608445408,0.214871054048298,0.382576664137687,0.661774257358546,1.15933917810211 | |||
|short_description=p@chr10:96970387..96970403,+ | |||
}} |
Latest revision as of 02:18, 5 August 2015
Short description: | p@chr10:96970387..96970403, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:96970387..96970403, + |
Coexpression cluster: | MCL_coexpression_mm9:98 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
muscle precursor cell | 7.88e-16 | 6 |
muscle cell | 7.88e-16 | 6 |
myoblast | 7.88e-16 | 6 |
mesodermal cell | 1.33e-13 | 7 |
multi-potent skeletal muscle stem cell | 1.27e-10 | 9 |
smooth muscle cell | 7.12e-09 | 3 |
vascular associated smooth muscle cell | 7.12e-09 | 3 |
aortic smooth muscle cell | 7.12e-09 | 3 |
smooth muscle myoblast | 7.12e-09 | 3 |
cardiocyte | 1.42e-08 | 3 |
striated muscle cell | 1.42e-08 | 3 |
cardiac muscle cell | 1.42e-08 | 3 |
cardiac muscle myoblast | 1.42e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
skeletal muscle tissue | 1.27e-10 | 9 |
striated muscle tissue | 1.27e-10 | 9 |
muscle tissue | 1.27e-10 | 9 |
multilaminar epithelium | 1.27e-10 | 9 |
epithelial vesicle | 1.27e-10 | 9 |
musculature | 1.27e-10 | 9 |
somite | 1.27e-10 | 9 |
myotome | 1.27e-10 | 9 |
presomitic mesoderm | 1.27e-10 | 9 |
presumptive segmental plate | 1.27e-10 | 9 |
dermomyotome | 1.27e-10 | 9 |
trunk paraxial mesoderm | 1.27e-10 | 9 |
musculature of body | 1.41e-09 | 10 |
smooth muscle tissue | 7.12e-09 | 3 |
blood vessel smooth muscle | 7.12e-09 | 3 |
arterial system smooth muscle | 7.12e-09 | 3 |
artery smooth muscle tissue | 7.12e-09 | 3 |
aorta smooth muscle tissue | 7.12e-09 | 3 |
dense mesenchyme tissue | 1.02e-08 | 11 |
paraxial mesoderm | 1.02e-08 | 11 |
presumptive paraxial mesoderm | 1.02e-08 | 11 |
trunk mesenchyme | 2.98e-07 | 45 |
uterus or analog | 4.10e-07 | 1 |
aorta | 7.43e-07 | 4 |
artery | 7.43e-07 | 4 |
systemic artery | 7.43e-07 | 4 |
arterial blood vessel | 7.43e-07 | 4 |
systemic arterial system | 7.43e-07 | 4 |
aortic system | 7.43e-07 | 4 |
arterial system | 7.43e-07 | 4 |
urinary bladder | 7.89e-07 | 1 |
lower urinary tract | 7.89e-07 | 1 |