FFCP PHASE1:Mm9::chr4:147822673..147822707,+: Difference between revisions
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{{FFCP|EntrezGene=56717|HGNC=|MCL_coexpression_id=60|UniProt=Q9JLN9,A2AH71|association_with_transcript=0bp_to_NM_020009,uc008vuq.2,uc008vur.2_5end|description=CAGE_peak_1_at_Mtor_5end|id=chr4:147822673..147822707,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0004111!7.79e-09!122;UBERON:0000955!9.09e-09!50;UBERON:0006238!9.09e-09!50;UBERON:0000025!9.40e-09!114;UBERON:0001049!2.21e-08!52;UBERON:0005068!2.21e-08!52;UBERON:0006241!2.21e-08!52;UBERON:0007135!2.21e-08!52;UBERON:0002616!2.86e-08!49;UBERON:0000033!8.22e-08!63;UBERON:0002020!4.85e-07!34|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.33e-09,54;UBERON:0004111,7.79e-09,122;UBERON:0000025,9.40e-09,114;UBERON:0001049,2.21e-08,52;UBERON:0005068,2.21e-08,52;UBERON:0006241,2.21e-08,52;UBERON:0007135,2.21e-08,52;UBERON:0000955,2.38e-07,47;UBERON:0006238,2.38e-07,47;UBERON:0002020,4.85e-07,34;UBERON:0002616,6.98e-07,46|phase1_expression=6.56610273129655,3.83872948403297,5.91499011206397,8.16653370528441,10.5188103288733,3.02182689441402,4.43864017131499,2.7115897922731,4.50523910885334,3.04283884218592,4.10923123741212,3.82906363177615,5.9920255475922,3.4093956943409,9.32707333083856,7.49158489342356,17.4890469532037,12.7762176970086,14.3970155286026,8.06340338416257,10.1201515279773,4.96454756004426,4.4403964153619,3.99981056983517,3.67054849707472,5.16808767703518,4.73838195774982,1.939241094173,1.90023419456374,2.01624103807945,1.55211357458713,6.98533740805594,12.916360539276,0,9.82095507154334,6.98185510505668,7.35009682544529,12.1374172913703,14.8453715459522,9.42342739152837,6.47054636834116,15.0270006690858,13.5942898848723,1.76255545165808,1.62203089951223,2.38610777810186,9.38869613217647,6.1047043786525,10.5449367712546,8.1660557611199,10.6389680435276,7.18762821824858,9.89917375740644,7.25362142011344,10.4189077734164,4.88792928468299,8.02293631828519,5.15672092277442,11.1274053472779,4.7609188134483,8.87363964908651,8.4711133017283,6.22506357277798,5.84934816232909,3.9554654502679,4.9733608046227,4.79360176829448,6.14749288514487,8.70992743391212,8.6403800532282,5.8890989178387,8.85518051651791,12.3686382932904,7.59442955132715,8.81778333367775,5.51531271966013,15.4162233399144,22.0899094887375,22.5801603886678,9.49581271657396,12.6252948171325,12.5019208933622,19.821992929098,20.2594539611405,16.0438160165651,13.5529149317887,14.2371680799103,10.9975673036927,6.58817881998701,7.93501381121248,14.2033599463822,12.0459342777394,8.83962733820076,12.9528765993076,8.4470934268197,14.7848872742121,4.35377702408431,1.70430322578058,1.03914401841148,1.06001872353102,5.35204995151386,5.13305909657271,12.7402619853323,7.11066703153331,3.46385665617943,6.58735650235256,3.53867111510348,4.90990682791958,10.3575153458869,14.6957717674177,4.8575891494518,6.08930956624282,7.61031140944993,8.59119051149949,9.17191915658498,14.325991411583,6.92145909656247,10.8449517689934,5.30766331169925,9.05894359705491,11.7046004784009,8.24287930329878,13.0474232852686,23.4224637609238,26.3902850584953,11.240110429178,6.11057134980193,5.99902730993408,6.22644112658017,21.4200614348896,18.7575247155637,10.4293112253677,18.251553620189,16.3657892691412,14.1295870300501,15.7374025175725,7.94347038032467,10.4501855312478,12.3834151632501,13.0473950649614,4.29397461776922,5.9774547152703,5.22180176435513,6.32960234910003,10.4095843701532,9.86475646193343,11.9938207436453,18.6266426932091,5.6047678162539,4.9167580843633,6.15828934573821,4.60311038097907,6.39508673218875,8.70630416305416,5.55611768301447,8.16040493955822,5.61770549850588,3.86021860672073,5.96743348730745,5.79952163099405,4.69052119962192,5.76198596675248,9.70653415899362,6.29645541591692,7.71335564436891,6.74348439776183,9.12129564758705,11.6765342367169,13.6584675428189,9.52171291658752,15.3220050041667,14.6199987425332,13.6121071480451,16.1047702512446,15.7717461423095,6.27718135513635,15.8601015832223,5.28901133327089,4.47905326123991,5.34144345279009,7.08771037271513,9.27744213267376,7.78323153457046,7.98947629672748,13.7613427847908,7.5761519173045,12.5667604400135,12.3353012665514,12.8676297498619,14.3811105384675,13.1844210423563,15.3338780405863,4.36236172192088,6.28366819353509,7.88954149711563,6.10953983535943,5.04276466635827,9.04752076585109,10.4972651626267,10.9231509504906,11.303908404579,11.2291419168838,10.6722945751374,7.84171996865642,7.66580080941492,9.219346607779,8.72298521970563,8.68237775108701,8.91190481234969,7.48009957372108,8.75530224585191,5.21666685057355,10.0637744569148,11.1642284300551,8.7370548472077,15.912469310668,8.96987067609561,10.6137574699941,14.041242452662,4.16881105895066,7.33342393989116,6.78980343100753,7.04070744865506,7.03526281255626,10.4739201989846,14.4398899414771,13.3989872490262,13.5093460685753,11.1618338060241,14.0922450655535,11.3972088031491,12.43981903801,3.01582567878545,3.26343410291226,6.88469982226651,10.4855963595798,21.353228468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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:56717 | |||
|HGNC= | |||
|MCL_coexpression_id=60 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9JLN9,uniprot:A2AH71 | |||
|association_with_transcript=0bp_to_NM_020009,uc008vuq.2,uc008vur.2_5end | |||
|cluster_id=chr4:147822673..147822707,+ | |||
|description=CAGE_peak_1_at_Mtor_5end | |||
|id=chr4:147822673..147822707,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004111!7.79e-09!122;UBERON:0000955!9.09e-09!50;UBERON:0006238!9.09e-09!50;UBERON:0000025!9.40e-09!114;UBERON:0001049!2.21e-08!52;UBERON:0005068!2.21e-08!52;UBERON:0006241!2.21e-08!52;UBERON:0007135!2.21e-08!52;UBERON:0002616!2.86e-08!49;UBERON:0000033!8.22e-08!63;UBERON:0002020!4.85e-07!34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.33e-09,54;UBERON:0004111,7.79e-09,122;UBERON:0000025,9.40e-09,114;UBERON:0001049,2.21e-08,52;UBERON:0005068,2.21e-08,52;UBERON:0006241,2.21e-08,52;UBERON:0007135,2.21e-08,52;UBERON:0000955,2.38e-07,47;UBERON:0006238,2.38e-07,47;UBERON:0002020,4.85e-07,34;UBERON:0002616,6.98e-07,46 | |||
|phase1_expression=6.56610273129655,3.83872948403297,5.91499011206397,8.16653370528441,10.5188103288733,3.02182689441402,4.43864017131499,2.7115897922731,4.50523910885334,3.04283884218592,4.10923123741212,3.82906363177615,5.9920255475922,3.4093956943409,9.32707333083856,7.49158489342356,17.4890469532037,12.7762176970086,14.3970155286026,8.06340338416257,10.1201515279773,4.96454756004426,4.4403964153619,3.99981056983517,3.67054849707472,5.16808767703518,4.73838195774982,1.939241094173,1.90023419456374,2.01624103807945,1.55211357458713,6.98533740805594,12.916360539276,0,9.82095507154334,6.98185510505668,7.35009682544529,12.1374172913703,14.8453715459522,9.42342739152837,6.47054636834116,15.0270006690858,13.5942898848723,1.76255545165808,1.62203089951223,2.38610777810186,9.38869613217647,6.1047043786525,10.5449367712546,8.1660557611199,10.6389680435276,7.18762821824858,9.89917375740644,7.25362142011344,10.4189077734164,4.88792928468299,8.02293631828519,5.15672092277442,11.1274053472779,4.7609188134483,8.87363964908651,8.4711133017283,6.22506357277798,5.84934816232909,3.9554654502679,4.9733608046227,4.79360176829448,6.14749288514487,8.70992743391212,8.6403800532282,5.8890989178387,8.85518051651791,12.3686382932904,7.59442955132715,8.81778333367775,5.51531271966013,15.4162233399144,22.0899094887375,22.5801603886678,9.49581271657396,12.6252948171325,12.5019208933622,19.821992929098,20.2594539611405,16.0438160165651,13.5529149317887,14.2371680799103,10.9975673036927,6.58817881998701,7.93501381121248,14.2033599463822,12.0459342777394,8.83962733820076,12.9528765993076,8.4470934268197,14.7848872742121,4.35377702408431,1.70430322578058,1.03914401841148,1.06001872353102,5.35204995151386,5.13305909657271,12.7402619853323,7.11066703153331,3.46385665617943,6.58735650235256,3.53867111510348,4.90990682791958,10.3575153458869,14.6957717674177,4.8575891494518,6.08930956624282,7.61031140944993,8.59119051149949,9.17191915658498,14.325991411583,6.92145909656247,10.8449517689934,5.30766331169925,9.05894359705491,11.7046004784009,8.24287930329878,13.0474232852686,23.4224637609238,26.3902850584953,11.240110429178,6.11057134980193,5.99902730993408,6.22644112658017,21.4200614348896,18.7575247155637,10.4293112253677,18.251553620189,16.3657892691412,14.1295870300501,15.7374025175725,7.94347038032467,10.4501855312478,12.3834151632501,13.0473950649614,4.29397461776922,5.9774547152703,5.22180176435513,6.32960234910003,10.4095843701532,9.86475646193343,11.9938207436453,18.6266426932091,5.6047678162539,4.9167580843633,6.15828934573821,4.60311038097907,6.39508673218875,8.70630416305416,5.55611768301447,8.16040493955822,5.61770549850588,3.86021860672073,5.96743348730745,5.79952163099405,4.69052119962192,5.76198596675248,9.70653415899362,6.29645541591692,7.71335564436891,6.74348439776183,9.12129564758705,11.6765342367169,13.6584675428189,9.52171291658752,15.3220050041667,14.6199987425332,13.6121071480451,16.1047702512446,15.7717461423095,6.27718135513635,15.8601015832223,5.28901133327089,4.47905326123991,5.34144345279009,7.08771037271513,9.27744213267376,7.78323153457046,7.98947629672748,13.7613427847908,7.5761519173045,12.5667604400135,12.3353012665514,12.8676297498619,14.3811105384675,13.1844210423563,15.3338780405863,4.36236172192088,6.28366819353509,7.88954149711563,6.10953983535943,5.04276466635827,9.04752076585109,10.4972651626267,10.9231509504906,11.303908404579,11.2291419168838,10.6722945751374,7.84171996865642,7.66580080941492,9.219346607779,8.72298521970563,8.68237775108701,8.91190481234969,7.48009957372108,8.75530224585191,5.21666685057355,10.0637744569148,11.1642284300551,8.7370548472077,15.912469310668,8.96987067609561,10.6137574699941,14.041242452662,4.16881105895066,7.33342393989116,6.78980343100753,7.04070744865506,7.03526281255626,10.4739201989846,14.4398899414771,13.3989872490262,13.5093460685753,11.1618338060241,14.0922450655535,11.3972088031491,12.43981903801,3.01582567878545,3.26343410291226,6.88469982226651,10.4855963595798,21.3532284683763,20.6292568402278,2.29508923527346,11.1087207969924,5.99465616890888,5.85658116444958,6.03185513651837,5.73525115086125,5.34716817797746,5.66153061577665,4.45291771842384,5.26060544240361,3.55759000151871,20.8858855674175,8.94222536812092,6.94455854302295,10.750539317336,11.3829384851049,17.2568679841952,6.31229654002952,8.76738315197778,6.78978287121233,6.496641643377,10.1453598821496,9.8202751403924,9.08834323693764,11.7644134866958,14.5376908650475,14.7586052004998,14.4389760547462,11.234506989875,3.78128297465751,4.91562998374467,6.00143698088458,5.67488747655275,9.0968096977056,9.3792941743209,10.0473433207818,6.57080782578389,5.50763384245932,8.15955072803359,8.57408515295696,9.20347232166662,10.8563264870681,13.8471919043638,15.2651036762907,12.2421951384537,17.8008289930089,7.86006051670122,8.2554747185289,5.74103034846106,9.41842285023455,10.935538217682,13.2691340459783,4.41943917984024,7.69732987780119,7.60099855924331,6.68269432610579,5.06137589729817,7.5228202836934,7.34436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| |||
|short_description=p1@Mtor | |||
}} |
Revision as of 04:21, 5 August 2015
Short description: | p1@Mtor |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Mtor_5end |
Coexpression cluster: | MCL_coexpression_mm9:60 |
Association with transcript: | 0bp_to_NM_020009, uc008vuq.2, uc008vur.2_5end |
EntrezGene: | 56717 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
regional part of nervous system | 2.33e-09 | 54 |
anatomical conduit | 7.79e-09 | 122 |
tube | 9.40e-09 | 114 |
neural tube | 2.21e-08 | 52 |
neural rod | 2.21e-08 | 52 |
future spinal cord | 2.21e-08 | 52 |
neural keel | 2.21e-08 | 52 |
brain | 2.38e-07 | 47 |
future brain | 2.38e-07 | 47 |
gray matter | 4.85e-07 | 34 |
regional part of brain | 6.98e-07 | 46 |