FFCP PHASE1:Mm9::chr4:46151356..46151393,+: Difference between revisions
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{{FFCP|EntrezGene=433702|HGNC=|UniProt=Q3UYV9,Q3TLK3|association_with_transcript=0bp_to_NM_001033201,uc008stj.1,uc008stk.1_5end|description=CAGE_peak_2_at_Ncbp1_5end|id=chr4:46151356..46151393,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002370!4.94e-11!23;UBERON:0000974!4.94e-11!23;UBERON:0004807!4.94e-11!23;UBERON:0005058!4.94e-11!23;UBERON:0003351!4.94e-11!23;UBERON:0009113!4.94e-11!23;UBERON:0003295!4.94e-11!23;UBERON:0009722!4.94e-11!23;UBERON:0005562!4.94e-11!23;UBERON:0007690!4.94e-11!23;UBERON:0000072!6.57e-11!27;UBERON:0003408!1.94e-10!24;UBERON:0006562!2.19e-10!24;UBERON:0001557!2.19e-10!24;UBERON:0001042!2.19e-10!24;UBERON:0008814!2.19e-10!24;UBERON:0009145!2.19e-10!24;UBERON:0004177!4.50e-10!29;UBERON:0005057!1.24e-07!51;UBERON:0003929!1.62e-07!55;UBERON:0002368!5.15e-07!60|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.00e-11,23;UBERON:0000974,4.00e-11,23;UBERON:0004807,4.00e-11,23;UBERON:0005058,4.00e-11,23;UBERON:0003351,4.00e-11,23;UBERON:0009113,4.00e-11,23;UBERON:0003295,4.00e-11,23;UBERON:0009722,4.00e-11,23;UBERON:0005562,4.00e-11,23;UBERON:0007690,4.00e-11,23;UBERON:0000072,5.40e-11,27;UBERON:0003408,1.59e-10,24;UBERON:0006562,1.79e-10,24;UBERON:0001557,1.79e-10,24;UBERON:0001042,1.79e-10,24;UBERON:0008814,1.79e-10,24;UBERON:0009145,1.79e-10,24;UBERON:0004177,3.75e-10,29;UBERON:0005057,3.75e-10,29;UBERON:0007811,1.49e-07,36;UBERON:0003929,1.50e-07,55;UBERON:0000077,4.12e-07,35;UBERON:0002368,4.80e-07,60|phase1_expression=3.52327463630547,3.48975407639361,2.27499619694768,1.81478526784098,2.00358291978539,3.52546471014969,3.03696432774183,2.84071311571468,3.09735188733667,3.04283884218592,4.45166717386313,3.35043067780413,4.28001824828014,6.03200776691082,2.99798785634096,3.03712901084739,2.79824751251259,2.99689057090326,2.87940310572051,2.12194825899015,1.19060606211498,3.07801948722744,2.35079810225042,1.75991665072747,2.06468352960453,1.72269589234506,2.15380998079537,1.50829862880122,3.04037471130198,2.77233142735924,3.76941868114018,4.44521471421742,4.30545351309199,0,3.75507105676657,2.1610503896604,1.42918549383658,2.51118978442145,0.7813353445238,2.61761871986899,2.94115744015507,5.46436387966757,2.42755176515577,1.88845226963366,1.82478476195126,1.65192076945513,0.782391344348039,1.30815093828268,1.97717564461025,0.58328969722285,1.39986421625363,0,1.67782606057736,5.80289713609076,4.7053131879945,1.02903774414379,1.43266719969378,1.03134418455488,1.61853168687678,3.1739458756322,6.33831403506179,2.03306719241479,0.889294796111139,0.449949858640699,0,1.4209602298922,0.299600110518405,1.15265491596466,2.28117147078651,4.3201900266141,3.57552434297349,1.14260393761521,0.441737081903227,4.65465037016825,3.64212789869298,1.83843757322004,2.20231761998777,1.14918604276669,0.614426133024974,3.03338461779446,2.37867873366265,4.16730696445408,1.3959149950069,0,2.29197371665215,2.65165726926301,2.56269025438385,2.05039390407831,3.86203585999239,1.96486056277642,0.869593466105033,1.72084775396277,2.719885334831,0,3.24888208723835,3.58421509677868,1.82577746171277,1.70430322578058,1.29893002301434,2.12003744706204,2.53518155598025,3.84979432242953,2.54805239706646,0,2.81438353314578,2.28023878927589,4.54972000513305,1.82694207550496,3.88406825470758,1.48442139064825,2.25530924795977,4.26251669636998,2.53677046981664,1.95939432718409,2.11659672844269,2.76466500925286,2.71914464507811,1.15679485535929,2.65383165584962,2.75003644910596,2.20841518460394,1.93950101254089,3.72783522436244,1.46390398505774,1.46612694769419,1.27728527604296,3.35482348616577,2.39961092397363,2.92261522268049,0.748953197024114,4.57500602818627,2.51308704225729,1.39059456153821,1.53429274398198,1.24672826735736,1.62241263067758,2.03678727700633,1.49288364732112,3.0326731012041,2.31486041475121,2.34216797332867,2.06911893990126,1.98068342785884,2.71268672104287,1.56483948048054,1.92170580427275,1.96773621575431,0.258703370739016,3.01795190105979,2.26927296201383,2.46331573829528,1.53437012699302,1.39023624612799,1.39300866608867,2.26360350048738,1.59227413454795,2.1066395619397,2.05878325691772,1.98914449576915,2.48550927042602,1.64168241986767,3.6012412292203,3.78791576936336,1.77087808572663,2.1597395804233,2.79040733700489,1.60964040839772,2.45207218971056,1.6455984991348,0.656669856316381,1.21603214318784,0.730999937126662,1.3173006917463,0.939444931322602,2.73376933133365,2.46971069710283,0.330418782983798,2.64450566663544,2.34617075588757,3.48355007790658,4.38149368495117,2.01683524623343,1.55664630691409,2.28270751335071,0.949058123089023,1.64698954724011,1.50801125280162,1.39269530428806,2.9244613067868,4.49409704327111,1.51296634912286,1.1948476395262,4.55202962287396,3.65595240351132,4.50830942692322,3.05476991767971,3.29719228184964,2.59502533594179,1.70738650235495,2.06654207171443,0.627994911365499,1.85095745882701,2.37162101669719,2.66952169145751,2.94838492669805,2.47348323623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| {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:433702 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q3UYV9,uniprot:Q3TLK3 | |||
|association_with_transcript=0bp_to_NM_001033201,uc008stj.1,uc008stk.1_5end | |||
|cluster_id=chr4:46151356..46151393,+ | |||
|description=CAGE_peak_2_at_Ncbp1_5end | |||
|id=chr4:46151356..46151393,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002370!4.94e-11!23;UBERON:0000974!4.94e-11!23;UBERON:0004807!4.94e-11!23;UBERON:0005058!4.94e-11!23;UBERON:0003351!4.94e-11!23;UBERON:0009113!4.94e-11!23;UBERON:0003295!4.94e-11!23;UBERON:0009722!4.94e-11!23;UBERON:0005562!4.94e-11!23;UBERON:0007690!4.94e-11!23;UBERON:0000072!6.57e-11!27;UBERON:0003408!1.94e-10!24;UBERON:0006562!2.19e-10!24;UBERON:0001557!2.19e-10!24;UBERON:0001042!2.19e-10!24;UBERON:0008814!2.19e-10!24;UBERON:0009145!2.19e-10!24;UBERON:0004177!4.50e-10!29;UBERON:0005057!1.24e-07!51;UBERON:0003929!1.62e-07!55;UBERON:0002368!5.15e-07!60 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002370,4.00e-11,23;UBERON:0000974,4.00e-11,23;UBERON:0004807,4.00e-11,23;UBERON:0005058,4.00e-11,23;UBERON:0003351,4.00e-11,23;UBERON:0009113,4.00e-11,23;UBERON:0003295,4.00e-11,23;UBERON:0009722,4.00e-11,23;UBERON:0005562,4.00e-11,23;UBERON:0007690,4.00e-11,23;UBERON:0000072,5.40e-11,27;UBERON:0003408,1.59e-10,24;UBERON:0006562,1.79e-10,24;UBERON:0001557,1.79e-10,24;UBERON:0001042,1.79e-10,24;UBERON:0008814,1.79e-10,24;UBERON:0009145,1.79e-10,24;UBERON:0004177,3.75e-10,29;UBERON:0005057,3.75e-10,29;UBERON:0007811,1.49e-07,36;UBERON:0003929,1.50e-07,55;UBERON:0000077,4.12e-07,35;UBERON:0002368,4.80e-07,60 | |||
|phase1_expression=3.52327463630547,3.48975407639361,2.27499619694768,1.81478526784098,2.00358291978539,3.52546471014969,3.03696432774183,2.84071311571468,3.09735188733667,3.04283884218592,4.45166717386313,3.35043067780413,4.28001824828014,6.03200776691082,2.99798785634096,3.03712901084739,2.79824751251259,2.99689057090326,2.87940310572051,2.12194825899015,1.19060606211498,3.07801948722744,2.35079810225042,1.75991665072747,2.06468352960453,1.72269589234506,2.15380998079537,1.50829862880122,3.04037471130198,2.77233142735924,3.76941868114018,4.44521471421742,4.30545351309199,0,3.75507105676657,2.1610503896604,1.42918549383658,2.51118978442145,0.7813353445238,2.61761871986899,2.94115744015507,5.46436387966757,2.42755176515577,1.88845226963366,1.82478476195126,1.65192076945513,0.782391344348039,1.30815093828268,1.97717564461025,0.58328969722285,1.39986421625363,0,1.67782606057736,5.80289713609076,4.7053131879945,1.02903774414379,1.43266719969378,1.03134418455488,1.61853168687678,3.1739458756322,6.33831403506179,2.03306719241479,0.889294796111139,0.449949858640699,0,1.4209602298922,0.299600110518405,1.15265491596466,2.28117147078651,4.3201900266141,3.57552434297349,1.14260393761521,0.441737081903227,4.65465037016825,3.64212789869298,1.83843757322004,2.20231761998777,1.14918604276669,0.614426133024974,3.03338461779446,2.37867873366265,4.16730696445408,1.3959149950069,0,2.29197371665215,2.65165726926301,2.56269025438385,2.05039390407831,3.86203585999239,1.96486056277642,0.869593466105033,1.72084775396277,2.719885334831,0,3.24888208723835,3.58421509677868,1.82577746171277,1.70430322578058,1.29893002301434,2.12003744706204,2.53518155598025,3.84979432242953,2.54805239706646,0,2.81438353314578,2.28023878927589,4.54972000513305,1.82694207550496,3.88406825470758,1.48442139064825,2.25530924795977,4.26251669636998,2.53677046981664,1.95939432718409,2.11659672844269,2.76466500925286,2.71914464507811,1.15679485535929,2.65383165584962,2.75003644910596,2.20841518460394,1.93950101254089,3.72783522436244,1.46390398505774,1.46612694769419,1.27728527604296,3.35482348616577,2.39961092397363,2.92261522268049,0.748953197024114,4.57500602818627,2.51308704225729,1.39059456153821,1.53429274398198,1.24672826735736,1.62241263067758,2.03678727700633,1.49288364732112,3.0326731012041,2.31486041475121,2.34216797332867,2.06911893990126,1.98068342785884,2.71268672104287,1.56483948048054,1.92170580427275,1.96773621575431,0.258703370739016,3.01795190105979,2.26927296201383,2.46331573829528,1.53437012699302,1.39023624612799,1.39300866608867,2.26360350048738,1.59227413454795,2.1066395619397,2.05878325691772,1.98914449576915,2.48550927042602,1.64168241986767,3.6012412292203,3.78791576936336,1.77087808572663,2.1597395804233,2.79040733700489,1.60964040839772,2.45207218971056,1.6455984991348,0.656669856316381,1.21603214318784,0.730999937126662,1.3173006917463,0.939444931322602,2.73376933133365,2.46971069710283,0.330418782983798,2.64450566663544,2.34617075588757,3.48355007790658,4.38149368495117,2.01683524623343,1.55664630691409,2.28270751335071,0.949058123089023,1.64698954724011,1.50801125280162,1.39269530428806,2.9244613067868,4.49409704327111,1.51296634912286,1.1948476395262,4.55202962287396,3.65595240351132,4.50830942692322,3.05476991767971,3.29719228184964,2.59502533594179,1.70738650235495,2.06654207171443,0.627994911365499,1.85095745882701,2.37162101669719,2.66952169145751,2.94838492669805,2.47348323623339,2.43432145666204,2.894125917029,4.32863948028414,1.15078454980324,0.810676133875177,2.19649130550465,1.43768206527355,2.23284568601102,2.18426371180192,2.02063102357689,2.87035861635059,2.41221760681684,2.03228509183265,3.60033682363921,2.77040459951444,2.20668611507745,1.64283173801951,2.51259386162724,0.952174563544055,2.14647012643579,1.26108115284953,0.8858587585951,1.59454768657487,1.47476983244164,1.55416483679306,0.867894351489069,0,1.08781136763742,3.93411418415229,3.03530420935206,1.12385412991454,1.64096361229084,0.819674726883377,2.52470927204373,2.83957397474631,2.34263246577983,3.23135096599198,2.86762557543062,2.45078541490634,3.39691836946599,4.45291771842384,2.92255857911312,0.790575555893047,2.89189184779626,1.84522110770749,2.13678724400706,1.30309567482861,2.14461159864296,0,1.94224508923985,3.93020624054176,1.13163047853539,0.590603785761546,1.84461088766356,1.03371317267288,1.09060118843252,2.13898427030833,1.8962205476149,2.10837217149998,1.03135543248187,1.36175842301515,1.98067203434441,2.19909762430683,3.64372959553707,1.95074257006501,1.60531935841864,2.46823530903181,2.74018454203139,1.87737366450968,1.69465656691056,1.32317038832977,1.48397627647332,1.93757312035087,2.5934557719107,2.38744688006273,2.62625439592098,2.33184669303881,1.29797711407357,1.70870880797853,1.03193433981611,3.1483069652851,2.82552685507037,2.87057878214153,2.74533807847827,2.37969801991397,2.51912614182584,1.52019971184866,0,4.11236791655476,2.03319467126849,2.37611749807963,1.88179466413022,1.31017538247707,3.10187996685088,1.57041565878138,2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| |||
|short_description=p2@Ncbp1 | |||
}} |
Revision as of 12:55, 5 August 2015
Short description: | p2@Ncbp1 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_Ncbp1_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_NM_001033201, uc008stj.1, uc008stk.1_5end |
EntrezGene: | 433702 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
thymus | 4.00e-11 | 23 |
neck | 4.00e-11 | 23 |
respiratory system epithelium | 4.00e-11 | 23 |
hemolymphoid system gland | 4.00e-11 | 23 |
pharyngeal epithelium | 4.00e-11 | 23 |
thymic region | 4.00e-11 | 23 |
pharyngeal gland | 4.00e-11 | 23 |
entire pharyngeal arch endoderm | 4.00e-11 | 23 |
thymus primordium | 4.00e-11 | 23 |
early pharyngeal endoderm | 4.00e-11 | 23 |
segment of respiratory tract | 5.40e-11 | 27 |
gland of gut | 1.59e-10 | 24 |
pharynx | 1.79e-10 | 24 |
upper respiratory tract | 1.79e-10 | 24 |
chordate pharynx | 1.79e-10 | 24 |
pharyngeal arch system | 1.79e-10 | 24 |
pharyngeal region of foregut | 1.79e-10 | 24 |
hemopoietic organ | 3.75e-10 | 29 |
immune organ | 3.75e-10 | 29 |
craniocervical region | 1.49e-07 | 36 |
gut epithelium | 1.50e-07 | 55 |
mixed endoderm/mesoderm-derived structure | 4.12e-07 | 35 |
endocrine gland | 4.80e-07 | 60 |