FFCP PHASE1:Mm9::chr2:79295107..79295119,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=403|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr2:79295107..79295119,-|id=chr2:79295107..79295119,-|ontology_enrichment_celltype=CL:0000120!1.10e-07!3;CL:0000117!3.47e-07!23;CL:0000337!3.47e-07!23|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000970!1.30e-20!9;UBERON:0000019!1.30e-20!9;UBERON:0000047!1.30e-20!9;UBERON:0004088!1.30e-20!9;UBERON:0002104!1.30e-20!9;UBERON:0001456!1.30e-20!9;UBERON:0003072!1.30e-20!9;UBERON:0003071!1.30e-20!9;UBERON:0004128!1.30e-20!9;UBERON:0003056!5.73e-17!49;UBERON:0001444!1.63e-16!11;UBERON:0000033!4.31e-15!63;UBERON:0000020!5.63e-15!12;UBERON:0001032!5.63e-15!12;UBERON:0004456!5.63e-15!12;UBERON:0002346!5.01e-14!71;UBERON:0003075!5.01e-14!71;UBERON:0007284!5.01e-14!71;UBERON:0005085!1.12e-13!13;UBERON:0004121!5.71e-11!102;UBERON:0000924!5.71e-11!102;UBERON:0006601!5.71e-11!102;UBERON:0007811!1.68e-09!86;UBERON:0000153!3.26e-08!94;UBERON:0001049!5.27e-07!52;UBERON:0005068!5.27e-07!52;UBERON:0006241!5.27e-07!52;UBERON:0007135!5.27e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0000970,7.03e-35,9;UBERON:0000019,7.03e-35,9;UBERON:0000047,7.03e-35,9;UBERON:0010312,7.03e-35,9;UBERON:0004088,7.03e-35,9;UBERON:0002104,7.03e-35,9;UBERON:0001456,7.03e-35,9;UBERON:0003072,7.03e-35,9;UBERON:0004128,7.03e-35,9;UBERON:0003071,7.03e-35,9;UBERON:0001444,1.22e-28,11;UBERON:0000020,2.69e-26,12;UBERON:0001032,2.69e-26,12;UBERON:0004456,2.69e-26,12;UBERON:0000033,2.59e-24,13;UBERON:0005085,2.59e-24,13;UBERON:0002037,2.08e-13,4;UBERON:0002680,2.08e-13,4;UBERON:0001895,2.08e-13,4;UBERON:0010092,2.08e-13,4;UBERON:0006215,2.08e-13,4;UBERON:0002346,9.52e-10,64;UBERON:0003075,9.52e-10,64;UBERON:0007284,9.52e-10,64;UBERON:0004733,2.87e-09,6;UBERON:0004732,2.87e-09,6;UBERON:0002028,2.87e-09,6;UBERON:0007277,2.87e-09,6;UBERON:0007811,5.21e-09,36;UBERON:0010371,1.47e-08,73;UBERON:0000153,1.40e-07,43;UBERON:0010314,8.41e-07,92|phase1_expression=0,0,0,0,0,0.503637815735669,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63502717310392,4.39838084308256,0,0,0,0,0,0,0,0,0.255715457330331,0.20778804455956,0,0,0,0,0.841767423545896,0.130120442962704,0.229902104433473,1.26043490863744,0.90422890701429,2.78949646520444,5.25266253167884,6.09061209638237,4.13925393182425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.354680467284547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0.51776031175182,0,0,0.341467211508268,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0|short_description=p@chr2:79295107..79295119,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=403 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr2:79295107..79295119,- | |||
|description=CAGE_peak_at_chr2:79295107..79295119,- | |||
|id=chr2:79295107..79295119,- | |||
|ontology_enrichment_celltype=CL:0000120!1.10e-07!3;CL:0000117!3.47e-07!23;CL:0000337!3.47e-07!23 | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000970!1.30e-20!9;UBERON:0000019!1.30e-20!9;UBERON:0000047!1.30e-20!9;UBERON:0004088!1.30e-20!9;UBERON:0002104!1.30e-20!9;UBERON:0001456!1.30e-20!9;UBERON:0003072!1.30e-20!9;UBERON:0003071!1.30e-20!9;UBERON:0004128!1.30e-20!9;UBERON:0003056!5.73e-17!49;UBERON:0001444!1.63e-16!11;UBERON:0000033!4.31e-15!63;UBERON:0000020!5.63e-15!12;UBERON:0001032!5.63e-15!12;UBERON:0004456!5.63e-15!12;UBERON:0002346!5.01e-14!71;UBERON:0003075!5.01e-14!71;UBERON:0007284!5.01e-14!71;UBERON:0005085!1.12e-13!13;UBERON:0004121!5.71e-11!102;UBERON:0000924!5.71e-11!102;UBERON:0006601!5.71e-11!102;UBERON:0007811!1.68e-09!86;UBERON:0000153!3.26e-08!94;UBERON:0001049!5.27e-07!52;UBERON:0005068!5.27e-07!52;UBERON:0006241!5.27e-07!52;UBERON:0007135!5.27e-07!52 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,7.03e-35,9;UBERON:0000019,7.03e-35,9;UBERON:0000047,7.03e-35,9;UBERON:0010312,7.03e-35,9;UBERON:0004088,7.03e-35,9;UBERON:0002104,7.03e-35,9;UBERON:0001456,7.03e-35,9;UBERON:0003072,7.03e-35,9;UBERON:0004128,7.03e-35,9;UBERON:0003071,7.03e-35,9;UBERON:0001444,1.22e-28,11;UBERON:0000020,2.69e-26,12;UBERON:0001032,2.69e-26,12;UBERON:0004456,2.69e-26,12;UBERON:0000033,2.59e-24,13;UBERON:0005085,2.59e-24,13;UBERON:0002037,2.08e-13,4;UBERON:0002680,2.08e-13,4;UBERON:0001895,2.08e-13,4;UBERON:0010092,2.08e-13,4;UBERON:0006215,2.08e-13,4;UBERON:0002346,9.52e-10,64;UBERON:0003075,9.52e-10,64;UBERON:0007284,9.52e-10,64;UBERON:0004733,2.87e-09,6;UBERON:0004732,2.87e-09,6;UBERON:0002028,2.87e-09,6;UBERON:0007277,2.87e-09,6;UBERON:0007811,5.21e-09,36;UBERON:0010371,1.47e-08,73;UBERON:0000153,1.40e-07,43;UBERON:0010314,8.41e-07,92 | |||
|phase1_expression=0,0,0,0,0,0.503637815735669,0.700837921786577,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.404632921719196,0.528990979272033,0.633831403506179,0,0,0,0,0,0,0,0.103689612308478,0.270011876663381,0,0,0,0.122490799214954,0.0958454710182364,0,0,0,0,0,0.0914876436024097,0,0,0,0.15279824777681,0,0,0.186399445825301,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.63502717310392,4.39838084308256,0,0,0,0,0,0,0,0,0.255715457330331,0.20778804455956,0,0,0,0,0.841767423545896,0.130120442962704,0.229902104433473,1.26043490863744,0.90422890701429,2.78949646520444,5.25266253167884,6.09061209638237,4.13925393182425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.411618449517138,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.258428293168221,0,0,0,0,0,0,0,0,0,0.354680467284547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.564751842617067,0,0.572895513439397,0.171853182343688,0,0,0,0,0,0.51776031175182,0,0,0.341467211508268,0,0,0.183843508450014,0,0,0,0,0,0,0,0,0.114870937911227,0,0,0,0,0,0,0,0.238436189947321,0,0,0.0846146078916765,0,0.263069711437843,0,0,0,0,0,0.154936841185966,0,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr2:79295107..79295119,- | |||
}} |
Latest revision as of 13:14, 5 August 2015
Short description: | p@chr2:79295107..79295119, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:79295107..79295119, - |
Coexpression cluster: | MCL_coexpression_mm9:403 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 7.03e-35 | 9 |
camera-type eye | 7.03e-35 | 9 |
simple eye | 7.03e-35 | 9 |
immature eye | 7.03e-35 | 9 |
ocular region | 7.03e-35 | 9 |
visual system | 7.03e-35 | 9 |
face | 7.03e-35 | 9 |
optic cup | 7.03e-35 | 9 |
optic vesicle | 7.03e-35 | 9 |
eye primordium | 7.03e-35 | 9 |
subdivision of head | 1.22e-28 | 11 |
sense organ | 2.69e-26 | 12 |
sensory system | 2.69e-26 | 12 |
entire sense organ system | 2.69e-26 | 12 |
head | 2.59e-24 | 13 |
ectodermal placode | 2.59e-24 | 13 |
cerebellum | 2.08e-13 | 4 |
regional part of metencephalon | 2.08e-13 | 4 |
metencephalon | 2.08e-13 | 4 |
future metencephalon | 2.08e-13 | 4 |
rhombic lip | 2.08e-13 | 4 |
neurectoderm | 9.52e-10 | 64 |
neural plate | 9.52e-10 | 64 |
presumptive neural plate | 9.52e-10 | 64 |
segmental subdivision of hindbrain | 2.87e-09 | 6 |
segmental subdivision of nervous system | 2.87e-09 | 6 |
hindbrain | 2.87e-09 | 6 |
presumptive hindbrain | 2.87e-09 | 6 |
craniocervical region | 5.21e-09 | 36 |
ecto-epithelium | 1.47e-08 | 73 |
anterior region of body | 1.40e-07 | 43 |
structure with developmental contribution from neural crest | 8.41e-07 | 92 |