FFCP PHASE1:Mm9::chr7:88851743..88851755,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=26557|HGNC=|MCL_coexpression_id=3642|UniProt=Q9QWW1|association_with_transcript=55bp_to_ENSMUST00000026922,NM_001164086,NM_011983,uc009ich.2,uc009ici.2,uc009ick.2_5end|description=CAGE_peak_4_at_Homer2_5end|id=chr7:88851743..88851755,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002021!1.42e-07!10;UBERON:0000411!1.42e-07!10;UBERON:0001950!1.42e-07!10;UBERON:0000160!3.12e-07!43;UBERON:0001045!6.14e-07!13|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.49e-17,10;UBERON:0000411,2.49e-17,10;UBERON:0001950,2.49e-17,10;UBERON:0002619,2.08e-11,17;UBERON:0000956,2.06e-10,21;UBERON:0001869,2.06e-10,21;UBERON:0000203,2.06e-10,21;UBERON:0002780,3.72e-07,39;UBERON:0001890,3.72e-07,39;UBERON:0006240,3.72e-07,39;UBERON:0003080,6.84e-07,40;UBERON:0003528,8.77e-07,29;UBERON:0002791,8.77e-07,29;UBERON:0001893,8.77e-07,29|phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,0.90739263392049,0.500895729946347,0.33575854382378,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,0.17008658030214,0,0,0.799962113967033,0.22940928106717,0,0,0.646413698057667,0.380046838912748,1.26015064879965,0,0,0,0,0,0.166234645358492,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0.311068836925433,0.270011876663381,0,0.285650984403804,0.662605622854841,0,0.0958454710182364,0,0,0.766124028511126,2.30409799884365,0.131886287730194,0.0914876436024097,0,0.837548997004143,0.56276261003168,0.30559649555362,0.294628585473668,0.142371680799103,0,0,0.0755715601067855,0.289864488701678,1.72084775396277,1.3599426674155,0.539703191637817,1.29955283489534,3.58421509677868,1.12355536105401,0,0,0,0.563373679106722,0,0,0,0,0,0,0.5709193985953,0,0.148442139064825,0.173485326766136,0,0,0,0,0,0,0,0,0.647067399789637,1.10420759230197,2.42437626567611,3.72783522436244,0.878342391034642,0.83778682725382,0.766371165625774,0,0,0,0.299581278809645,0.915001205637253,0.251308704225729,1.56441888173049,1.79000820131231,1.0389402227978,1.29793010454206,0.101839363850316,0.124406970610093,0.252722758433675,0.420883711772948,0.130120442962704,0,0,0.150704817835715,0.136072998302656,0,0.187403449119458,0,0.215567992932842,0.189106080167819,0.351902248327898,0.43839146485515,0.278047249225598,0.696504333044333,0.205782136407943,0,0,0,0.284163499395593,1.44988040774851,0.703578179943289,0.180062061461015,0.473489471170421,0.983821158737019,0.925602677324269,0.465067889500816,0.536546802799238,0.817357396570186,1.31647879930784,1.31333971263276,0.729619285912702,2.48539978623065,3.29325172936576,2.68412837520744,2.94405927989778,0.205809224758569,0.660837565967596,0.793351699990633,0,0,0.38660238396628,1.61346819698674,0.444756087689741,0.380451252225118,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,0.19496408711912,0,0.432276099749388,0.597423819763102,0.189667900953082,0.342745537829186,0,0.610953983535943,0.387904974335251,0.140271639780637,0,0,0,0,3.26097889795864,0,0.196558995113203,0,0,0,0,0,0,0,2.87536413054709,0,0.936113019343682,0.505157755894224,1.07638448113147,0,0.369506380333209,0,0.488894929326078,0.169745085775188,0,0.502518772325447,0,0.390267295715598,0,0,0,0.163863314715738,0,0,0,0,1.47529281905711,1.10374698521893,0.642202359951168,0.468846746368813,0,4.29200576247434,0,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0,3.21321316421807,0,0.178065603667255,0,0,6.63725691699814,0.485561272309963,0.604647113929502,0.565815239267694,0.885905678642318,0.307435147943927,1.03371317267288,0.727067458955011,1.78248689192361,3.16036757935816,3.16255825724996,9.28219889233682,3.06395645178409,0,0,0.428674070063185,0.354680467284547,0.356737635204141,0.658196082408484,0,0.23467170806371,0.21183207086382,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0.328281799490123,0.582961673259701,0.370850604021019,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0.406638934253697,0.540026704109006,0.418176592028937,0.436725127492355,0.944050424693745,0.743881101528023,0.523511883968059,0,3.10669656543463,0,0.149516546043979,0,0.388902376688095,0.129159823477731,0,0,0,0.209718688851422,0,0.288030006257865,0,0,0.102710957164827,0.25984164595559,0.179026695667481,0,0,0,0.100966449948148,0,0,0,0,0,1.58711268530648,0.221985953374065,0.0897138566094757,2.68615386182526,0.772758376128762,0,0,0,0,2.25900737046827,1.84130094602871,2.86447756719698,2.40594455281163,2.05524755931193,2.2661816921691,4.05013500139084,1.80128481289688,1.81256963593682,2.5888015587591,0.415149390336707,0,0,0.486213434136588,0,0.367687016900028,0.666740183404846,0.206035057238894,1.28367683836726,0.758091635291392,0,0.565879024158229,0.187283014939765,0.192075457214608,0.0574354689556133,0,0,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.145346416632329,0.282328141245992,0.592302255241736,0,0.789209134313529,0.135804113845862,0,0.474540072496697,0.492522411877817,0,0.154936841185966,0,0,0,0.214871054048298,0.57386499620653,0.661774257358546,1.85494268496337|short_description=p4@Homer2}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:26557 | |||
|HGNC= | |||
|MCL_coexpression_id=3642 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q9QWW1 | |||
|association_with_transcript=55bp_to_ENSMUST00000026922,NM_001164086,NM_011983,uc009ich.2,uc009ici.2,uc009ick.2_5end | |||
|cluster_id=chr7:88851743..88851755,- | |||
|description=CAGE_peak_4_at_Homer2_5end | |||
|id=chr7:88851743..88851755,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002021!1.42e-07!10;UBERON:0000411!1.42e-07!10;UBERON:0001950!1.42e-07!10;UBERON:0000160!3.12e-07!43;UBERON:0001045!6.14e-07!13 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002021,2.49e-17,10;UBERON:0000411,2.49e-17,10;UBERON:0001950,2.49e-17,10;UBERON:0002619,2.08e-11,17;UBERON:0000956,2.06e-10,21;UBERON:0001869,2.06e-10,21;UBERON:0000203,2.06e-10,21;UBERON:0002780,3.72e-07,39;UBERON:0001890,3.72e-07,39;UBERON:0006240,3.72e-07,39;UBERON:0003080,6.84e-07,40;UBERON:0003528,8.77e-07,29;UBERON:0002791,8.77e-07,29;UBERON:0001893,8.77e-07,29 | |||
|phase1_expression=0.480446541314382,0.348975407639361,0.454999239389536,0.90739263392049,0.500895729946347,0.33575854382378,0,0,0,0,0,0,0,0,0,0.404950534779652,0,0,0,0,0.17008658030214,0,0,0.799962113967033,0.22940928106717,0,0,0.646413698057667,0.380046838912748,1.26015064879965,0,0,0,0,0,0.166234645358492,0.816677425049476,0,0,0,0,0,0,0,0,0,0,0.218025156380447,0,0,0.139986421625363,0,0,0,0,0,0,0,0.202316460859598,0.528990979272033,0,0,0,0,0,0,0.299600110518405,0,0.311068836925433,0.270011876663381,0,0.285650984403804,0.662605622854841,0,0.0958454710182364,0,0,0.766124028511126,2.30409799884365,0.131886287730194,0.0914876436024097,0,0.837548997004143,0.56276261003168,0.30559649555362,0.294628585473668,0.142371680799103,0,0,0.0755715601067855,0.289864488701678,1.72084775396277,1.3599426674155,0.539703191637817,1.29955283489534,3.58421509677868,1.12355536105401,0,0,0,0.563373679106722,0,0,0,0,0,0,0.5709193985953,0,0.148442139064825,0.173485326766136,0,0,0,0,0,0,0,0,0.647067399789637,1.10420759230197,2.42437626567611,3.72783522436244,0.878342391034642,0.83778682725382,0.766371165625774,0,0,0,0.299581278809645,0.915001205637253,0.251308704225729,1.56441888173049,1.79000820131231,1.0389402227978,1.29793010454206,0.101839363850316,0.124406970610093,0.252722758433675,0.420883711772948,0.130120442962704,0,0,0.150704817835715,0.136072998302656,0,0.187403449119458,0,0.215567992932842,0.189106080167819,0.351902248327898,0.43839146485515,0.278047249225598,0.696504333044333,0.205782136407943,0,0,0,0.284163499395593,1.44988040774851,0.703578179943289,0.180062061461015,0.473489471170421,0.983821158737019,0.925602677324269,0.465067889500816,0.536546802799238,0.817357396570186,1.31647879930784,1.31333971263276,0.729619285912702,2.48539978623065,3.29325172936576,2.68412837520744,2.94405927989778,0.205809224758569,0.660837565967596,0.793351699990633,0,0,0.38660238396628,1.61346819698674,0.444756087689741,0.380451252225118,0.474529061544512,0.329397909448022,0.754005626400808,0.397912944082302,0.19496408711912,0,0.432276099749388,0.597423819763102,0.189667900953082,0.342745537829186,0,0.610953983535943,0.387904974335251,0.140271639780637,0,0,0,0,3.26097889795864,0,0.196558995113203,0,0,0,0,0,0,0,2.87536413054709,0,0.936113019343682,0.505157755894224,1.07638448113147,0,0.369506380333209,0,0.488894929326078,0.169745085775188,0,0.502518772325447,0,0.390267295715598,0,0,0,0.163863314715738,0,0,0,0,1.47529281905711,1.10374698521893,0.642202359951168,0.468846746368813,0,4.29200576247434,0,0,0.215423397732799,0,0.222798674082394,0.283076530788832,0,0.292255857911312,0,3.21321316421807,0,0.178065603667255,0,0,6.63725691699814,0.485561272309963,0.604647113929502,0.565815239267694,0.885905678642318,0.307435147943927,1.03371317267288,0.727067458955011,1.78248689192361,3.16036757935816,3.16255825724996,9.28219889233682,3.06395645178409,0,0,0.428674070063185,0.354680467284547,0.356737635204141,0.658196082408484,0,0.23467170806371,0.21183207086382,0,0,0.322928853391811,0.0603129249281559,0.119372344003136,0.328281799490123,0.582961673259701,0.370850604021019,0,0,0.185194527369712,0,0,0,0,0,0,0.954670618015114,0,0.406638934253697,0.540026704109006,0.418176592028937,0.436725127492355,0.944050424693745,0.743881101528023,0.523511883968059,0,3.10669656543463,0,0.149516546043979,0,0.388902376688095,0.129159823477731,0,0,0,0.209718688851422,0,0.288030006257865,0,0,0.102710957164827,0.25984164595559,0.179026695667481,0,0,0,0.100966449948148,0,0,0,0,0,1.58711268530648,0.221985953374065,0.0897138566094757,2.68615386182526,0.772758376128762,0,0,0,0,2.25900737046827,1.84130094602871,2.86447756719698,2.40594455281163,2.05524755931193,2.2661816921691,4.05013500139084,1.80128481289688,1.81256963593682,2.5888015587591,0.415149390336707,0,0,0.486213434136588,0,0.367687016900028,0.666740183404846,0.206035057238894,1.28367683836726,0.758091635291392,0,0.565879024158229,0.187283014939765,0.192075457214608,0.0574354689556133,0,0,0.192909220463705,0,0.294397840268795,0,0.354951612318675,0.238436189947321,0.145346416632329,0.282328141245992,0.592302255241736,0,0.789209134313529,0.135804113845862,0,0.474540072496697,0.492522411877817,0,0.154936841185966,0,0,0,0.214871054048298,0.57386499620653,0.661774257358546,1.85494268496337 | |||
|short_description=p4@Homer2 | |||
}} |
Revision as of 16:26, 5 August 2015
Short description: | p4@Homer2 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_Homer2_5end |
Coexpression cluster: | MCL_coexpression_mm9:3642 |
Association with transcript: | 55bp_to_ENSMUST00000026922, NM_001164086, NM_011983, uc009ich.2, uc009ici.2, uc009ick.2_5end |
EntrezGene: | 26557 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
occipital lobe | 2.49e-17 | 10 |
visual cortex | 2.49e-17 | 10 |
neocortex | 2.49e-17 | 10 |
regional part of cerebral cortex | 2.08e-11 | 17 |
cerebral cortex | 2.06e-10 | 21 |
cerebral hemisphere | 2.06e-10 | 21 |
pallium | 2.06e-10 | 21 |
regional part of forebrain | 3.72e-07 | 39 |
forebrain | 3.72e-07 | 39 |
future forebrain | 3.72e-07 | 39 |
anterior neural tube | 6.84e-07 | 40 |
brain grey matter | 8.77e-07 | 29 |
regional part of telencephalon | 8.77e-07 | 29 |
telencephalon | 8.77e-07 | 29 |