FFCP PHASE1:Mm9::chr3:104855834..104855856,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 1: | Line 1: | ||
{{FFCP|EntrezGene=80281|HGNC=|UniProt=Q99LJ0,Q922L8|association_with_transcript=14bp_to_ENSMUST00000098763,NM_001163332,NM_001163333,uc008quv.2,uc012cvn.1,uc012cvo.1_5end|description=CAGE_peak_1_at_Cttnbp2nl_5end|id=chr3:104855834..104855856,-|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000468!4.25e-13!333;UBERON:0000922!7.14e-11!328;UBERON:0005178!5.26e-08!17;UBERON:0005181!5.26e-08!17;UBERON:0002224!5.26e-08!17;UBERON:0000915!5.26e-08!17;UBERON:0008947!5.26e-08!17;UBERON:0003258!5.26e-08!17;UBERON:0002048!1.12e-07!14;UBERON:0000117!1.12e-07!14;UBERON:0000171!1.12e-07!14;UBERON:0000170!1.12e-07!14;UBERON:0005597!1.12e-07!14;UBERON:0000118!1.12e-07!14|ontology_enrichment_uberon_v019_2=UBERON:0000922,8.26e-10,320;UBERON:0005178,5.14e-08,17;UBERON:0005181,5.14e-08,17;UBERON:0002224,5.14e-08,17;UBERON:0000915,5.14e-08,17;UBERON:0008947,5.14e-08,17;UBERON:0003258,5.14e-08,17;UBERON:0002048,1.10e-07,14;UBERON:0000117,1.10e-07,14;UBERON:0000171,1.10e-07,14;UBERON:0000170,1.10e-07,14;UBERON:0005597,1.10e-07,14;UBERON:0000118,1.10e-07,14;UBERON:0004121,1.50e-07,95;UBERON:0000924,1.50e-07,95;UBERON:0006601,1.50e-07,95|phase1_expression=2.40223270657191,2.09385244583617,1.36499771816861,4.23449895829562,6.51164448930251,6.21153306073992,4.90586545250604,0,0,0,0,0,0,0,0.666219523631325,0.607425802169478,1.39912375625629,0.788655413395594,0.274228867211478,0,9.52484849691981,0,0,2.87986361028132,2.52350209173887,0.57423196411502,1.7230479846363,1.29282739611533,1.71021077510736,2.01624103807945,2.21730510655305,0.635030673459631,0,0,5.19932915552294,4.3221007793208,6.94175811292055,0.837063261473815,1.5626706890476,0,0.588231488031014,0,0,3.39921408534059,6.18399280439039,5.68994931701213,3.12956537739216,5.01457859675027,2.19686182734472,3.4997381833371,2.2397827460058,7.18762821824858,0,0,0,17.4936416504444,7.73640287834643,15.4701627683233,6.67644320836673,7.40587370980846,10.775133859605,1.69422266034566,0.889294796111139,16.6481447697059,11.8663963508037,8.5257613793532,8.38880309451533,7.68436610643109,5.91030790158323,6.61529097825284,4.6271491497304,5.42736870367227,2.65042249141936,10.1667363348412,10.2554653989513,8.27296907949019,3.30347642998166,4.59674417106676,5.22262213071228,8.70449499019279,9.24025200384338,4.68822033501084,3.62937898701795,5.06486349028512,5.04234217663473,7.07108605136802,9.11178757114259,8.76077395378913,18.6286435599633,16.6257432234928,38.2621125086215,2.58127163094416,0.679971333707751,0,1.94932925234301,2.24013443548668,2.38755514223978,1.36344258062446,1.03914401841148,0.70667914902068,7.04217098883402,0,2.54805239706646,7.11066703153331,6.27824018932521,7.34743609877786,9.0994400102661,5.1382745873577,11.3932668804756,6.53145411885229,3.29622120855658,0.304465478312141,3.22861696158482,1.95939432718409,4.35078216402108,2.89033160058254,9.64060374164058,7.08536848907567,1.76922110389975,3.23533699894818,4.19598885074748,6.78825354389311,1.86391761218122,4.9772735491963,3.97948742945565,3.57639877292028,1.31796636956512,0,0.381210681219194,6.5907881338122,11.4375150704657,9.42407640846483,6.60532416730651,4.85859368927628,8.10373373782284,6.16516799657479,5.49932564791708,4.22983700074316,9.85618757891331,3.15662783829711,5.72529949035896,5.28774840196988,8.10279584124071,7.08312643827861,4.76255494059295,5.38077625196369,4.31027932974753,2.32833033665114,9.05385570317937,8.88798576788751,7.9178005873777,3.06874025398605,6.39508673218875,8.00979983000983,7.81972118350185,4.77682240364384,0,0,0.284163499395593,11.8061690345236,5.15957331958412,7.56260658136262,9.46978942340841,10.0349758191176,5.24508183817086,6.97601834251224,6.43856163359086,11.4430035519826,6.25327429671226,9.02921052435024,9.24184428822755,9.5029991826466,8.56245449635098,10.3338942445486,6.09840850835969,7.82075054082562,1.65209391491899,2.90895623329899,3.83918850963421,5.57368012465052,5.7990357594942,4.03367049246685,5.55945109612176,4.37518940058886,3.79623249235609,3.62337700392824,2.26201687920243,4.97391180102877,3.50935356814416,2.69645822596266,4.75503709724327,7.56736838366595,4.1726938209678,4.45569199177942,9.01661885384643,6.31319116320474,5.81857461502877,6.87331034925122,6.57659986092276,6.6424566590821,4.08196692387575,2.83813477020141,2.37162101669719,1.16791574001266,1.76903095601883,0.449724224769707,2.63718157805054,1.20588579876208,2.03700681425136,4.60313819921297,4.37765112292595,2.19649130550465,4.31304619582064,2.23284568601102,3.12037673114561,3.28352541331245,1.79397413521912,0.964887042726734,31.777548708656,4.54779388249163,9.94086356296358,5.09235257325564,9.85699042811709,16.9181320016234,28.3271932654356,41.5634669937112,30.2659476683887,28.568944964692,28.3829488210327,28.1844901311069,22.1036776788346,30.5209513606989,24.1266054302836,31.5465296614852,2.45882136509518,5.79467167239938,8.50918126935297,7.03270119553219,1.63934945376675,5.55436039849621,5.67914794949262,5.85658116444958,6.03185513651837,8.84184552424442,13.590719119026,14.4369030702305,7.2865926301481,13.151513606009,13.4397844501818,13.4954952897159,7.66476460124651,3.02711526234334,5.86393053672874,11.71287873105,3.98235415019888,1.21390318077491,3.93020624054176,2.64047111658257,2.36241514304618,6.7635732547664,4.65170927702798,5.45300594216258,3.56497378384721,2.21225730555071,2.10837217149998,5.15677716240934,10.2131881726136,4.86164953884538,4.01011919726539,4.92975180572662,4.25616560741457,6.77801506887868,6.74650984468696,4.56697423671899,20.8857820176702,20.7595429446544,2.20528398054962,12.8611277294354,13.5630118424561,9.58975506357678,9.19167048824151,11.9822856813895,5.82961673259701,8.90041449650446,1.36696704638282,2.68302928352189,2.22233432843654,0.941842285023455,0.546776910884101,1.14389086603261,1.35982743995084,0.69975726161829,0.552799895217695,12.4107180341965,6.48488786841327,6.09958401380546,5.18425635944646,4.59994251231831,7.86105229486239,7.55240339754996,7.85207829390691,8.89970202745701,7.64728342421578,1.24267862617385,0,3.28936401296753,2.31641886639937,2.91676782516071,2.84151611651008,2.19642963138012,3.87278887530988,2.47388331203505,1.99232754408851,0.483168241652012,2.30424005006292,1.89606672376907,3.44632865993279,1.43795340030758,1.68897069871134,2.68540043501222,1.78813219303138,2.40390899039938,1.77227432609493,1.11063094942962,0.838274873204998,0.403304740547362,1.07203668813728,1.05833025804362,1.98690733708667,14.2840141677583,4.88369097422942,4.57540668708326,8.22634620183984,5.9888774149979,13.3254557570339,12.6374620744413,15.6488916727718,2.50786052017682,6.21227026878773,5.06357760157895,7.44764167471216,6.18671456437275,4.11049511862385,3.7769694869485,6.75022500231806,4.5032120322422,6.34399372577886,4.14208249401456,6.01966615988225,10.7736715818278,5.63420898988643,6.80698807791223,3.77303692730368,5.1476182366004,6.88964856185007,6.59312183164461,6.4183841918363,6.06473308233114,6.33698249725599,6.97917463128482,4.775716880964,8.19521950782327,6.77738533676237,7.62069906052918,7.06894388263618,5.40145817298374,8.24171801606613,7.80154276712306,4.4573002810104,5.85670160325814,6.19934093863034,5.37781741539616,7.90518795488777,6.17686637609238,6.95126296916536,7.62902163169744,5.83957689537206,11.7839877048125,7.23673610557462,7.38783617816726,10.2307760792422,6.97215785336847,6.75173138433995,5.9954538705107,7.25187986180766,8.16510005383534,8.7992632751668,5.95596831622692,2.08681052058379|short_description=p1@Cttnbp2nl}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:80281 | |||
|HGNC= | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:Q99LJ0,uniprot:Q922L8 | |||
|association_with_transcript=14bp_to_ENSMUST00000098763,NM_001163332,NM_001163333,uc008quv.2,uc012cvn.1,uc012cvo.1_5end | |||
|cluster_id=chr3:104855834..104855856,- | |||
|description=CAGE_peak_1_at_Cttnbp2nl_5end | |||
|id=chr3:104855834..104855856,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!4.25e-13!333;UBERON:0000922!7.14e-11!328;UBERON:0005178!5.26e-08!17;UBERON:0005181!5.26e-08!17;UBERON:0002224!5.26e-08!17;UBERON:0000915!5.26e-08!17;UBERON:0008947!5.26e-08!17;UBERON:0003258!5.26e-08!17;UBERON:0002048!1.12e-07!14;UBERON:0000117!1.12e-07!14;UBERON:0000171!1.12e-07!14;UBERON:0000170!1.12e-07!14;UBERON:0005597!1.12e-07!14;UBERON:0000118!1.12e-07!14 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000922,8.26e-10,320;UBERON:0005178,5.14e-08,17;UBERON:0005181,5.14e-08,17;UBERON:0002224,5.14e-08,17;UBERON:0000915,5.14e-08,17;UBERON:0008947,5.14e-08,17;UBERON:0003258,5.14e-08,17;UBERON:0002048,1.10e-07,14;UBERON:0000117,1.10e-07,14;UBERON:0000171,1.10e-07,14;UBERON:0000170,1.10e-07,14;UBERON:0005597,1.10e-07,14;UBERON:0000118,1.10e-07,14;UBERON:0004121,1.50e-07,95;UBERON:0000924,1.50e-07,95;UBERON:0006601,1.50e-07,95 | |||
|phase1_expression=2.40223270657191,2.09385244583617,1.36499771816861,4.23449895829562,6.51164448930251,6.21153306073992,4.90586545250604,0,0,0,0,0,0,0,0.666219523631325,0.607425802169478,1.39912375625629,0.788655413395594,0.274228867211478,0,9.52484849691981,0,0,2.87986361028132,2.52350209173887,0.57423196411502,1.7230479846363,1.29282739611533,1.71021077510736,2.01624103807945,2.21730510655305,0.635030673459631,0,0,5.19932915552294,4.3221007793208,6.94175811292055,0.837063261473815,1.5626706890476,0,0.588231488031014,0,0,3.39921408534059,6.18399280439039,5.68994931701213,3.12956537739216,5.01457859675027,2.19686182734472,3.4997381833371,2.2397827460058,7.18762821824858,0,0,0,17.4936416504444,7.73640287834643,15.4701627683233,6.67644320836673,7.40587370980846,10.775133859605,1.69422266034566,0.889294796111139,16.6481447697059,11.8663963508037,8.5257613793532,8.38880309451533,7.68436610643109,5.91030790158323,6.61529097825284,4.6271491497304,5.42736870367227,2.65042249141936,10.1667363348412,10.2554653989513,8.27296907949019,3.30347642998166,4.59674417106676,5.22262213071228,8.70449499019279,9.24025200384338,4.68822033501084,3.62937898701795,5.06486349028512,5.04234217663473,7.07108605136802,9.11178757114259,8.76077395378913,18.6286435599633,16.6257432234928,38.2621125086215,2.58127163094416,0.679971333707751,0,1.94932925234301,2.24013443548668,2.38755514223978,1.36344258062446,1.03914401841148,0.70667914902068,7.04217098883402,0,2.54805239706646,7.11066703153331,6.27824018932521,7.34743609877786,9.0994400102661,5.1382745873577,11.3932668804756,6.53145411885229,3.29622120855658,0.304465478312141,3.22861696158482,1.95939432718409,4.35078216402108,2.89033160058254,9.64060374164058,7.08536848907567,1.76922110389975,3.23533699894818,4.19598885074748,6.78825354389311,1.86391761218122,4.9772735491963,3.97948742945565,3.57639877292028,1.31796636956512,0,0.381210681219194,6.5907881338122,11.4375150704657,9.42407640846483,6.60532416730651,4.85859368927628,8.10373373782284,6.16516799657479,5.49932564791708,4.22983700074316,9.85618757891331,3.15662783829711,5.72529949035896,5.28774840196988,8.10279584124071,7.08312643827861,4.76255494059295,5.38077625196369,4.31027932974753,2.32833033665114,9.05385570317937,8.88798576788751,7.9178005873777,3.06874025398605,6.39508673218875,8.00979983000983,7.81972118350185,4.77682240364384,0,0,0.284163499395593,11.8061690345236,5.15957331958412,7.56260658136262,9.46978942340841,10.0349758191176,5.24508183817086,6.97601834251224,6.43856163359086,11.4430035519826,6.25327429671226,9.02921052435024,9.24184428822755,9.5029991826466,8.56245449635098,10.3338942445486,6.09840850835969,7.82075054082562,1.65209391491899,2.90895623329899,3.83918850963421,5.57368012465052,5.7990357594942,4.03367049246685,5.55945109612176,4.37518940058886,3.79623249235609,3.62337700392824,2.26201687920243,4.97391180102877,3.50935356814416,2.69645822596266,4.75503709724327,7.56736838366595,4.1726938209678,4.45569199177942,9.01661885384643,6.31319116320474,5.81857461502877,6.87331034925122,6.57659986092276,6.6424566590821,4.08196692387575,2.83813477020141,2.37162101669719,1.16791574001266,1.76903095601883,0.449724224769707,2.63718157805054,1.20588579876208,2.03700681425136,4.60313819921297,4.37765112292595,2.19649130550465,4.31304619582064,2.23284568601102,3.12037673114561,3.28352541331245,1.79397413521912,0.964887042726734,31.777548708656,4.54779388249163,9.94086356296358,5.09235257325564,9.85699042811709,16.9181320016234,28.3271932654356,41.5634669937112,30.2659476683887,28.568944964692,28.3829488210327,28.1844901311069,22.1036776788346,30.5209513606989,24.1266054302836,31.5465296614852,2.45882136509518,5.79467167239938,8.50918126935297,7.03270119553219,1.63934945376675,5.55436039849621,5.67914794949262,5.85658116444958,6.03185513651837,8.84184552424442,13.590719119026,14.4369030702305,7.2865926301481,13.151513606009,13.4397844501818,13.4954952897159,7.66476460124651,3.02711526234334,5.86393053672874,11.71287873105,3.98235415019888,1.21390318077491,3.93020624054176,2.64047111658257,2.36241514304618,6.7635732547664,4.65170927702798,5.45300594216258,3.56497378384721,2.21225730555071,2.10837217149998,5.15677716240934,10.2131881726136,4.86164953884538,4.01011919726539,4.92975180572662,4.25616560741457,6.77801506887868,6.74650984468696,4.56697423671899,20.8857820176702,20.7595429446544,2.20528398054962,12.8611277294354,13.5630118424561,9.58975506357678,9.19167048824151,11.9822856813895,5.82961673259701,8.90041449650446,1.36696704638282,2.68302928352189,2.22233432843654,0.941842285023455,0.546776910884101,1.14389086603261,1.35982743995084,0.69975726161829,0.552799895217695,12.4107180341965,6.48488786841327,6.09958401380546,5.18425635944646,4.59994251231831,7.86105229486239,7.55240339754996,7.85207829390691,8.89970202745701,7.64728342421578,1.24267862617385,0,3.28936401296753,2.31641886639937,2.91676782516071,2.84151611651008,2.19642963138012,3.87278887530988,2.47388331203505,1.99232754408851,0.483168241652012,2.30424005006292,1.89606672376907,3.44632865993279,1.43795340030758,1.68897069871134,2.68540043501222,1.78813219303138,2.40390899039938,1.77227432609493,1.11063094942962,0.838274873204998,0.403304740547362,1.07203668813728,1.05833025804362,1.98690733708667,14.2840141677583,4.88369097422942,4.57540668708326,8.22634620183984,5.9888774149979,13.3254557570339,12.6374620744413,15.6488916727718,2.50786052017682,6.21227026878773,5.06357760157895,7.44764167471216,6.18671456437275,4.11049511862385,3.7769694869485,6.75022500231806,4.5032120322422,6.34399372577886,4.14208249401456,6.01966615988225,10.7736715818278,5.63420898988643,6.80698807791223,3.77303692730368,5.1476182366004,6.88964856185007,6.59312183164461,6.4183841918363,6.06473308233114,6.33698249725599,6.97917463128482,4.775716880964,8.19521950782327,6.77738533676237,7.62069906052918,7.06894388263618,5.40145817298374,8.24171801606613,7.80154276712306,4.4573002810104,5.85670160325814,6.19934093863034,5.37781741539616,7.90518795488777,6.17686637609238,6.95126296916536,7.62902163169744,5.83957689537206,11.7839877048125,7.23673610557462,7.38783617816726,10.2307760792422,6.97215785336847,6.75173138433995,5.9954538705107,7.25187986180766,8.16510005383534,8.7992632751668,5.95596831622692,2.08681052058379 | |||
|short_description=p1@Cttnbp2nl | |||
}} |
Revision as of 19:10, 5 August 2015
Short description: | p1@Cttnbp2nl |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_Cttnbp2nl_5end |
Coexpression cluster: | NA |
Association with transcript: | 14bp_to_ENSMUST00000098763, NM_001163332, NM_001163333, uc008quv.2, uc012cvn.1, uc012cvo.1_5end |
EntrezGene: | 80281 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryo | 8.26e-10 | 320 |
thoracic cavity element | 5.14e-08 | 17 |
thoracic segment organ | 5.14e-08 | 17 |
thoracic cavity | 5.14e-08 | 17 |
thoracic segment of trunk | 5.14e-08 | 17 |
respiratory primordium | 5.14e-08 | 17 |
endoderm of foregut | 5.14e-08 | 17 |
lung | 1.10e-07 | 14 |
respiratory tube | 1.10e-07 | 14 |
respiration organ | 1.10e-07 | 14 |
pair of lungs | 1.10e-07 | 14 |
lung primordium | 1.10e-07 | 14 |
lung bud | 1.10e-07 | 14 |
ectoderm-derived structure | 1.50e-07 | 95 |
ectoderm | 1.50e-07 | 95 |
presumptive ectoderm | 1.50e-07 | 95 |