FFCP PHASE1:Mm9::chr6:48997901..48997913,+: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=38|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr6:48997901..48997913,+|id=chr6:48997901..48997913,+|ontology_enrichment_celltype=CL:0000333!2.89e-16!10;CL:0000095!2.89e-16!10;CL:0000243!2.89e-16!10;CL:0000123!2.89e-16!10;CL:0000125!2.89e-16!10;CL:0000030!2.89e-16!10;CL:0000339!2.89e-16!10;CL:0002453!2.30e-12!8;CL:0002194!2.39e-12!4;CL:0000766!2.39e-12!4;CL:0000576!2.39e-12!4;CL:0000235!2.39e-12!4;CL:0002009!2.39e-12!4;CL:0000040!2.39e-12!4;CL:0000559!2.39e-12!4;CL:0000680!5.32e-11!6;CL:0000183!5.32e-11!6;CL:0000187!5.32e-11!6;CL:0000056!5.32e-11!6;CL:0002092!6.54e-10!3;CL:0002540!6.54e-10!3;CL:0000222!2.20e-09!7;CL:0000192!3.47e-08!3;CL:0000359!3.47e-08!3;CL:0002539!3.47e-08!3;CL:0000514!3.47e-08!3;CL:0000128!1.20e-07!6;CL:0000126!1.20e-07!6;CL:0000127!1.20e-07!6;CL:0000055!1.57e-07!50;CL:0000219!2.69e-07!54;CL:0000355!3.16e-07!9;CL:0000557!4.98e-07!7;CL:0000864!7.17e-07!2;CL:0000878!7.17e-07!2;CL:0000129!7.17e-07!2|ontology_enrichment_celltype_v019_2=CL:0002194,5.95e-39,4;CL:0000766,5.95e-39,4;CL:0000234,5.95e-39,4;CL:0000576,5.95e-39,4;CL:0000235,5.95e-39,4;CL:0000864,5.95e-39,4;CL:0002009,5.95e-39,4;CL:0000040,5.95e-39,4;CL:0000559,5.95e-39,4;CL:0002092,1.83e-30,3;CL:0002540,1.83e-30,3;CL:0000473,1.64e-22,7;CL:0000557,1.64e-22,7;CL:0002476,1.01e-20,2;CL:0000878,6.10e-20,2;CL:0000129,6.10e-20,2;CL:0000839,2.46e-12,13;CL:0000219,2.30e-11,54;CL:0002453,2.41e-11,8;CL:0002320,2.56e-10,46;CL:0000134,2.56e-10,46;CL:0000763,4.28e-10,16;CL:0000738,1.60e-09,17;CL:0002087,1.60e-09,17;CL:0000333,3.34e-09,10;CL:0000095,3.34e-09,10;CL:0000243,3.34e-09,10;CL:0000123,3.34e-09,10;CL:0000125,3.34e-09,10;CL:0000030,3.34e-09,10;CL:0000339,3.34e-09,10;CL:0000049,1.48e-08,19|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002204!1.62e-10!32;UBERON:0002371!2.17e-08!16;UBERON:0001135!3.47e-08!3;UBERON:0004237!3.47e-08!3;UBERON:0004695!3.47e-08!3;UBERON:0002111!3.47e-08!3;UBERON:0004178!3.47e-08!3;UBERON:0001134!3.16e-07!9;UBERON:0002036!3.16e-07!9;UBERON:0002385!3.16e-07!9;UBERON:0000486!3.16e-07!9;UBERON:0001015!3.16e-07!9;UBERON:0004290!3.16e-07!9;UBERON:0003082!3.16e-07!9|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.99e-30,16;UBERON:0001474,1.07e-21,22;UBERON:0004765,1.07e-21,22;UBERON:0001434,1.07e-21,22;UBERON:0002204,2.45e-19,32;UBERON:0002390,1.50e-10,45;UBERON:0003061,1.50e-10,45;UBERON:0002384,2.56e-10,46;UBERON:0002193,7.03e-10,48;UBERON:0002405,7.03e-10,48;UBERON:0003081,6.19e-07,87|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.101376931219515,0.183546752161682,0,0,0.439372365468944,0.777719596297134,0.279972843250725,1.43752564364972,0,0,0,0.514518872071894,2.0057340795713,0,0,0,0,0.338844532069132,0,27.4469413770827,52.4099172160496,32.6820852875206,2.09720077362883,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,37.6978209848181,8.70249094109935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0.21183207086382,0,0,0,0,0.238744688006273,0.656563598980245,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0|short_description=p@chr6:48997901..48997913,+}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=38 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr6:48997901..48997913,+ | |||
|description=CAGE_peak_at_chr6:48997901..48997913,+ | |||
|id=chr6:48997901..48997913,+ | |||
|ontology_enrichment_celltype=CL:0000333!2.89e-16!10;CL:0000095!2.89e-16!10;CL:0000243!2.89e-16!10;CL:0000123!2.89e-16!10;CL:0000125!2.89e-16!10;CL:0000030!2.89e-16!10;CL:0000339!2.89e-16!10;CL:0002453!2.30e-12!8;CL:0002194!2.39e-12!4;CL:0000766!2.39e-12!4;CL:0000576!2.39e-12!4;CL:0000235!2.39e-12!4;CL:0002009!2.39e-12!4;CL:0000040!2.39e-12!4;CL:0000559!2.39e-12!4;CL:0000680!5.32e-11!6;CL:0000183!5.32e-11!6;CL:0000187!5.32e-11!6;CL:0000056!5.32e-11!6;CL:0002092!6.54e-10!3;CL:0002540!6.54e-10!3;CL:0000222!2.20e-09!7;CL:0000192!3.47e-08!3;CL:0000359!3.47e-08!3;CL:0002539!3.47e-08!3;CL:0000514!3.47e-08!3;CL:0000128!1.20e-07!6;CL:0000126!1.20e-07!6;CL:0000127!1.20e-07!6;CL:0000055!1.57e-07!50;CL:0000219!2.69e-07!54;CL:0000355!3.16e-07!9;CL:0000557!4.98e-07!7;CL:0000864!7.17e-07!2;CL:0000878!7.17e-07!2;CL:0000129!7.17e-07!2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,5.95e-39,4;CL:0000766,5.95e-39,4;CL:0000234,5.95e-39,4;CL:0000576,5.95e-39,4;CL:0000235,5.95e-39,4;CL:0000864,5.95e-39,4;CL:0002009,5.95e-39,4;CL:0000040,5.95e-39,4;CL:0000559,5.95e-39,4;CL:0002092,1.83e-30,3;CL:0002540,1.83e-30,3;CL:0000473,1.64e-22,7;CL:0000557,1.64e-22,7;CL:0002476,1.01e-20,2;CL:0000878,6.10e-20,2;CL:0000129,6.10e-20,2;CL:0000839,2.46e-12,13;CL:0000219,2.30e-11,54;CL:0002453,2.41e-11,8;CL:0002320,2.56e-10,46;CL:0000134,2.56e-10,46;CL:0000763,4.28e-10,16;CL:0000738,1.60e-09,17;CL:0002087,1.60e-09,17;CL:0000333,3.34e-09,10;CL:0000095,3.34e-09,10;CL:0000243,3.34e-09,10;CL:0000123,3.34e-09,10;CL:0000125,3.34e-09,10;CL:0000030,3.34e-09,10;CL:0000339,3.34e-09,10;CL:0000049,1.48e-08,19 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002204!1.62e-10!32;UBERON:0002371!2.17e-08!16;UBERON:0001135!3.47e-08!3;UBERON:0004237!3.47e-08!3;UBERON:0004695!3.47e-08!3;UBERON:0002111!3.47e-08!3;UBERON:0004178!3.47e-08!3;UBERON:0001134!3.16e-07!9;UBERON:0002036!3.16e-07!9;UBERON:0002385!3.16e-07!9;UBERON:0000486!3.16e-07!9;UBERON:0001015!3.16e-07!9;UBERON:0004290!3.16e-07!9;UBERON:0003082!3.16e-07!9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.99e-30,16;UBERON:0001474,1.07e-21,22;UBERON:0004765,1.07e-21,22;UBERON:0001434,1.07e-21,22;UBERON:0002204,2.45e-19,32;UBERON:0002390,1.50e-10,45;UBERON:0003061,1.50e-10,45;UBERON:0002384,2.56e-10,46;UBERON:0002193,7.03e-10,48;UBERON:0002405,7.03e-10,48;UBERON:0003081,6.19e-07,87 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.377690453926732,0.101376931219515,0.183546752161682,0,0,0.439372365468944,0.777719596297134,0.279972843250725,1.43752564364972,0,0,0,0.514518872071894,2.0057340795713,0,0,0,0,0.338844532069132,0,27.4469413770827,52.4099172160496,32.6820852875206,2.09720077362883,1.15265491596466,0,0,0,0,0,0,0,0,0,0,0,0,0.0914876436024097,0,0,0,0,0,0,0,0.075726193333184,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150704817835715,0.0680364991513279,0,0,0.776110112217047,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164167464079095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195133647857799,0,0,0,0,0,0,37.6978209848181,8.70249094109935,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.938686832254841,0.21183207086382,0,0,0,0,0.238744688006273,0.656563598980245,0,0,0.170870880797853,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129614973291793,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19318959403219,0.187682475451182,0,0,0.501572104035363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr6:48997901..48997913,+ | |||
}} |
Latest revision as of 21:20, 5 August 2015
Short description: | p@chr6:48997901..48997913, + |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr6:48997901..48997913, + |
Coexpression cluster: | MCL_coexpression_mm9:38 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.99e-30 | 16 |
bone element | 1.07e-21 | 22 |
skeletal element | 1.07e-21 | 22 |
skeletal system | 1.07e-21 | 22 |
musculoskeletal system | 2.45e-19 | 32 |
hematopoietic system | 1.50e-10 | 45 |
blood island | 1.50e-10 | 45 |
connective tissue | 2.56e-10 | 46 |
hemolymphoid system | 7.03e-10 | 48 |
immune system | 7.03e-10 | 48 |
lateral plate mesoderm | 6.19e-07 | 87 |