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FFCP PHASE1:Mm9::chr15:99532568..99532636,+: Difference between revisions

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{{FFCP|EntrezGene=83797|HGNC=|MCL_coexpression_id=1|UniProt=Q61466,Q68FH8|association_with_transcript=-81bp_to_ENSMUST00000023759,NM_031842,uc007xqb.1_5end|description=CAGE_peak_2_at_Smarcd1_5end|id=chr15:99532568..99532636,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0000073!1.32e-09!75;UBERON:0001016!1.32e-09!75;UBERON:0000955!1.78e-09!50;UBERON:0006238!1.78e-09!50;UBERON:0002616!6.17e-09!49;UBERON:0001017!8.56e-09!73;UBERON:0005743!8.56e-09!73;UBERON:0002791!1.48e-08!29;UBERON:0003528!1.48e-08!29;UBERON:0001893!1.48e-08!29;UBERON:0004121!5.03e-08!102;UBERON:0000924!5.03e-08!102;UBERON:0006601!5.03e-08!102;UBERON:0002021!5.94e-08!10;UBERON:0000411!5.94e-08!10;UBERON:0001950!5.94e-08!10;UBERON:0002020!5.17e-07!34;UBERON:0001049!5.68e-07!52;UBERON:0005068!5.68e-07!52;UBERON:0006241!5.68e-07!52;UBERON:0007135!5.68e-07!52|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.32e-09,75;UBERON:0001017,8.56e-09,73;UBERON:0003528,1.48e-08,29;UBERON:0002791,1.48e-08,29;UBERON:0001893,1.48e-08,29;UBERON:0000955,4.55e-08,47;UBERON:0006238,4.55e-08,47;UBERON:0002021,5.94e-08,10;UBERON:0000411,5.94e-08,10;UBERON:0001950,5.94e-08,10;UBERON:0000073,7.88e-08,54;UBERON:0002616,1.47e-07,46;UBERON:0002020,5.17e-07,34;UBERON:0001049,5.68e-07,52;UBERON:0005068,5.68e-07,52;UBERON:0006241,5.68e-07,52;UBERON:0007135,5.68e-07,52|phase1_expression=5.44506080156299,5.58360652222978,6.3699893514535,11.1911758183527,12.5223932486587,6.37941233265181,6.07392865548367,6.71441281896197,11.6854639385883,14.0438715793196,9.41698825240277,11.0883301003518,5.64962408772979,6.29426897416781,6.66219523631325,7.08663435864391,10.4934281719222,6.62470547252299,7.12995054749842,6.36584477697045,9.35476191661768,7.4468213400664,4.96279599363977,7.35965144849671,4.81759490241057,6.89078356938024,4.73838195774982,4.52489588640367,7.9809836171677,6.5527833737582,5.98672378769323,8.89042942843484,9.84103660135312,15.8481681015439,6.93243887403059,5.98444723290572,6.12508068787107,4.18531630736908,3.906676722619,5.23523743973798,3.52938892818609,3.41522742479223,4.36959317728038,11.330713617802,11.6583470902442,8.25960384727567,16.4302182313088,8.06693078607652,7.0299578475031,7.38833616482277,8.53917171914711,7.18762821824858,12.5836954543302,7.97898356212479,9.41062637598899,7.97504251711436,8.02293631828519,3.09403255366465,9.5088736604011,10.0508286061686,9.50747105259269,5.42151251310611,13.3394219416671,7.64914759689189,11.8663963508037,9.2362414942993,11.9840044207362,10.373894243682,5.08079100311541,7.96535036156975,7.36137364729837,5.42736870367227,7.73039893330647,7.22695715368229,8.62609239164127,6.43453150627015,26.4278114398533,28.0912143787413,20.2760623898241,12.6610836220986,9.69769022185542,7.29278718779464,21.7762739221077,16.3201156909187,18.9469827243245,7.36571463684169,5.12538050876771,8.94717339961443,15.9782267933018,16.2478854229589,5.79728977403356,6.0229671388697,4.75979933595425,2.69851595818909,3.24888208723835,1.34408066129201,7.5839986871146,16.3613109674935,8.83272415649754,8.83348936275851,5.35204995151386,7.69958864485907,5.09610479413291,0,6.061749148314,5.32055717497707,4.54972000513305,6.50848114398642,6.99132285847364,15.289540323677,8.84775166507293,11.8741536541735,10.3776973765226,10.399862198131,12.1116368349776,9.92766071504436,10.8765785803125,13.4477401935518,8.84610551949874,9.54424414689714,7.95029466457417,11.1521308221101,1.86391761218122,25.1791485429931,19.6879904404648,9.45191104271788,4.79260498023681,0.599902730993408,4.95573885584952,23.9665023047716,44.3775584734068,9.42407640846483,53.5378906192212,46.7959286914505,30.3370545056958,32.6104938766193,5.80484373946803,8.58408097209642,4.0435641349388,6.31325567659422,5.98554037628437,4.36813998423599,5.22180176435513,8.13806016312861,5.98721192531685,5.38077625196369,5.90320864726292,7.76110112217047,7.32931175971664,2.83659120251729,4.75068035242662,5.2606975782618,7.50727572909114,5.92028683087683,6.58502836505419,5.37392520409932,4.91549231119264,7.20574139921202,6.81992398549422,6.42089894860056,4.22146907965973,6.30217215113552,6.15536312521547,7.28027657465394,6.94202007993202,8.13868806626427,8.58474884478781,7.00592054203017,10.3672705445493,8.53670813211295,12.0792526223325,10.3801991071986,12.953456802172,9.5286557319864,35.3287113587734,9.77593817603202,4.95628174475697,6.61126416658861,7.03851226766272,5.10920678092965,7.60318021800351,8.67239155880373,8.00560957841533,7.79925067061493,8.54152310780121,10.5407331023367,9.29940272560997,10.544693018181,8.38345574612217,7.19055526923377,5.83572734661674,8.56307474993779,7.96605184002943,9.59687505921722,6.76246414038483,6.92414514674068,7.17624202520215,7.22398944870281,8.03104021478068,6.4948465111025,6.43694784149637,7.65062416315163,1.77871576252289,8.00856507437251,9.23827277032054,6.74586337154561,4.46292267054706,8.68237775108701,7.12952384987975,4.89083433666378,5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{{FFCP
|DHSsupport=NA
|DPIdataset=NA
|EntrezGene=entrezgene:83797
|HGNC=
|MCL_coexpression_id=1
|TSSclassifier=NA
|UniProt=uniprot:Q61466,uniprot:Q68FH8
|association_with_transcript=-81bp_to_ENSMUST00000023759,NM_031842,uc007xqb.1_5end
|cluster_id=chr15:99532568..99532636,+
|description=CAGE_peak_2_at_Smarcd1_5end
|id=chr15:99532568..99532636,+
|ontology_enrichment_celltype=
|ontology_enrichment_celltype_v019_2=
|ontology_enrichment_disease=
|ontology_enrichment_disease_v019_2=
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|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.32e-09,75;UBERON:0001017,8.56e-09,73;UBERON:0003528,1.48e-08,29;UBERON:0002791,1.48e-08,29;UBERON:0001893,1.48e-08,29;UBERON:0000955,4.55e-08,47;UBERON:0006238,4.55e-08,47;UBERON:0002021,5.94e-08,10;UBERON:0000411,5.94e-08,10;UBERON:0001950,5.94e-08,10;UBERON:0000073,7.88e-08,54;UBERON:0002616,1.47e-07,46;UBERON:0002020,5.17e-07,34;UBERON:0001049,5.68e-07,52;UBERON:0005068,5.68e-07,52;UBERON:0006241,5.68e-07,52;UBERON:0007135,5.68e-07,52
|phase1_expression=5.44506080156299,5.58360652222978,6.3699893514535,11.1911758183527,12.5223932486587,6.37941233265181,6.07392865548367,6.71441281896197,11.6854639385883,14.0438715793196,9.41698825240277,11.0883301003518,5.64962408772979,6.29426897416781,6.66219523631325,7.08663435864391,10.4934281719222,6.62470547252299,7.12995054749842,6.36584477697045,9.35476191661768,7.4468213400664,4.96279599363977,7.35965144849671,4.81759490241057,6.89078356938024,4.73838195774982,4.52489588640367,7.9809836171677,6.5527833737582,5.98672378769323,8.89042942843484,9.84103660135312,15.8481681015439,6.93243887403059,5.98444723290572,6.12508068787107,4.18531630736908,3.906676722619,5.23523743973798,3.52938892818609,3.41522742479223,4.36959317728038,11.330713617802,11.6583470902442,8.25960384727567,16.4302182313088,8.06693078607652,7.0299578475031,7.38833616482277,8.53917171914711,7.18762821824858,12.5836954543302,7.97898356212479,9.41062637598899,7.97504251711436,8.02293631828519,3.09403255366465,9.5088736604011,10.0508286061686,9.50747105259269,5.42151251310611,13.3394219416671,7.64914759689189,11.8663963508037,9.2362414942993,11.9840044207362,10.373894243682,5.08079100311541,7.96535036156975,7.36137364729837,5.42736870367227,7.73039893330647,7.22695715368229,8.62609239164127,6.43453150627015,26.4278114398533,28.0912143787413,20.2760623898241,12.6610836220986,9.69769022185542,7.29278718779464,21.7762739221077,16.3201156909187,18.9469827243245,7.36571463684169,5.12538050876771,8.94717339961443,15.9782267933018,16.2478854229589,5.79728977403356,6.0229671388697,4.75979933595425,2.69851595818909,3.24888208723835,1.34408066129201,7.5839986871146,16.3613109674935,8.83272415649754,8.83348936275851,5.35204995151386,7.69958864485907,5.09610479413291,0,6.061749148314,5.32055717497707,4.54972000513305,6.50848114398642,6.99132285847364,15.289540323677,8.84775166507293,11.8741536541735,10.3776973765226,10.399862198131,12.1116368349776,9.92766071504436,10.8765785803125,13.4477401935518,8.84610551949874,9.54424414689714,7.95029466457417,11.1521308221101,1.86391761218122,25.1791485429931,19.6879904404648,9.45191104271788,4.79260498023681,0.599902730993408,4.95573885584952,23.9665023047716,44.3775584734068,9.42407640846483,53.5378906192212,46.7959286914505,30.3370545056958,32.6104938766193,5.80484373946803,8.58408097209642,4.0435641349388,6.31325567659422,5.98554037628437,4.36813998423599,5.22180176435513,8.13806016312861,5.98721192531685,5.38077625196369,5.90320864726292,7.76110112217047,7.32931175971664,2.83659120251729,4.75068035242662,5.2606975782618,7.50727572909114,5.92028683087683,6.58502836505419,5.37392520409932,4.91549231119264,7.20574139921202,6.81992398549422,6.42089894860056,4.22146907965973,6.30217215113552,6.15536312521547,7.28027657465394,6.94202007993202,8.13868806626427,8.58474884478781,7.00592054203017,10.3672705445493,8.53670813211295,12.0792526223325,10.3801991071986,12.953456802172,9.5286557319864,35.3287113587734,9.77593817603202,4.95628174475697,6.61126416658861,7.03851226766272,5.10920678092965,7.60318021800351,8.67239155880373,8.00560957841533,7.79925067061493,8.54152310780121,10.5407331023367,9.29940272560997,10.544693018181,8.38345574612217,7.19055526923377,5.83572734661674,8.56307474993779,7.96605184002943,9.59687505921722,6.76246414038483,6.92414514674068,7.17624202520215,7.22398944870281,8.03104021478068,6.4948465111025,6.43694784149637,7.65062416315163,1.77871576252289,8.00856507437251,9.23827277032054,6.74586337154561,4.46292267054706,8.68237775108701,7.12952384987975,4.89083433666378,5.83686816390127,4.94210543738547,4.31304619582064,8.18710084870708,6.24075346229121,4.2938409251009,3.94674309748207,4.82443521363367,9.23765950833023,5.11626811780309,8.96307370431142,9.67546988918572,9.15291968325158,9.21284415929987,10.4739201989846,8.58588050574315,15.6058792665129,13.0664166892777,13.3942005672289,9.17634562408133,8.80693407516067,10.7040303350319,6.03165135757089,5.98296252200581,6.88469982226651,5.79467167239938,27.6147014779002,28.248016468721,12.9508606847574,7.57412781613119,5.04813151066011,8.19921363022941,7.53981892064796,8.36390792833932,12.2539270745317,9.90767857760913,5.26253912177363,8.18316402151673,5.13874111330481,49.8048040453801,8.94222536812092,7.47875535402472,6.02681749608232,6.92874516484649,7.96470830039777,4.85561272309963,3.93020624054176,5.65815239267694,8.26845300066164,5.84126781093462,8.26970538138308,7.27067458955011,6.41695281092498,5.68866164284469,5.27093042874994,2.06271086496374,7.14923172082955,3.78128297465751,4.52755393239641,5.14408884075822,4.96552654198366,5.52943334566419,4.60737257685939,6.69822888052118,11.9682571112492,5.71946591332314,5.29268155331909,6.10079135883476,7.42736362801165,9.77069383836125,7.04296829618505,8.37118588699812,8.74442509889552,23.5490133553347,5.12612642393558,6.3979929068599,9.63011542322501,10.9253705062721,11.072232445403,8.23601423543482,6.28920190977265,8.39708713941948,9.25939824489639,5.72802370809068,6.95939185878498,6.91286188231286,5.29226170026826,5.43629569637619,5.24070152990826,5.66430254816247,6.36431609085087,3.92633912976044,5.57344385154709,7.45607175704311,5.07323644815771,8.07389348637486,6.12196414691261,7.00024278038572,6.19967152693109,6.58928889414035,6.21993364822496,8.72369378454466,12.687980675511,9.42178071221424,5.76060012515731,6.63623353319174,6.68993210457542,5.85452455839515,8.05509102462329,8.41425469637163,8.14593554603186,4.92801343031872,6.64602872285597,5.75508764704442,5.79171730577999,6.15039729334727,6.72459377104292,5.96513418170043,5.72696820689688,6.12172035761071,8.65745218158852,13.8159339178593,7.72269235274761,7.72758376128762,5.81815673898664,5.12824547948342,7.07415650960917,4.01257683228291,31.0613513439387,41.4292712856459,32.6550442660456,33.3395173746754,40.4198686664679,33.2373314851468,39.8263275136765,46.8334051353189,49.8456649882625,57.9891549162038,7.05753963572401,6.3843979744165,7.17081144167364,6.07766792670735,7.75568701723535,6.98605332110054,8.22312892865976,9.47761263298913,9.62757628775446,6.31743029409494,9.88569269571935,8.29955902098735,7.77224512000024,7.49094283136971,7.52404643318534,7.62069906052918,9.38663040153329,8.68091492086673,6.1812885120496,8.09594060739185,9.25746981440622,8.5188386956482,7.86839426826159,6.83128158171944,6.49354724865781,7.69992931814256,9.51225458938417,8.15516105457313,9.09887562767274,6.17256498823512,9.49080144993393,8.76689893142515,4.50154147486658,6.50734732981057,7.71626443924566,8.24374907195222,5.38042699424439,8.80971321598023,6.50380329034067,10.1472052794977,8.57910991795559
|short_description=p2@Smarcd1
}}

Revision as of 00:13, 6 August 2015

Short description:p2@Smarcd1
Species:Mouse (Mus musculus)
DPI dataset: NA
TSS-like-by-RIKEN-classifier(Yes/No): NA
DHS support(Yes/No): NA
Description: CAGE_peak_2_at_Smarcd1_5end
Coexpression cluster:MCL_coexpression_mm9:1
Association with transcript: -81bp_to_ENSMUST00000023759, NM_031842, uc007xqb.1_5end
EntrezGene:83797
Link to Zenbu:ZENBU


View on UCSC genome browser

Mouse over to see Genome browser image, Click image to go to Genome browser


CAGE Expression

Sample

p2@Smarcd1

Atoh1+ Inner ear hair cells - organ of corti, pool1.CNhs12533.12158-128G75.45
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13242.11850-124I55.58
CD326+ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13233.11851-124I66.37
CD326+ enterocyte, pool1.CNhs13542.11848-124I311.19
CD326+ enterocyte, pool2.CNhs13197.11849-124I412.52
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool1.CNhs13236.11852-124I76.38
CD326++ enterocyte isolated from mice, treated with RANKL, day03, pool2.CNhs13210.11853-124I86.07
CD4+CD25+ regulatory T cells, pool2 (Balb_cAJcl).CNhs13221.11818-124E96.71
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool1 (C57BL_6J).CNhs13219.11816-124E711.69
CD4+CD25-CD44- naive conventional T cells, PMA and ionomycin stimulation, 02hr, pool2 (Balb_cAJcl).CNhs13226.11820-124F214.04
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool1 (C57BL_6J).CNhs13218.11815-124E69.42
CD4+CD25-CD44- naive conventional T cells, antiCD3_CD28 stimulation, 06hr, pool2 (Balb_cAJcl).CNhs13225.11819-124F111.09
CD4+CD25-CD44- naive conventional T cells, pool1 (C57BL_6J).CNhs13217.11813-124E45.65
CD4+CD25-CD44- naive conventional T cells, pool2 (Balb_cAJcl).CNhs13220.11817-124E86.29
CD41+ megakaryocyte cancer, donor1.CNhs13079.11774-124A16.66
CD41+ megakaryocyte cancer, donor2.CNhs13213.11776-124A37.09
CD41+ megakaryocyte cancer, donor3.CNhs13506.11778-124A510.49
CD41+ megakaryocyte control, donor1.CNhs13212.11775-124A26.62
CD41+ megakaryocyte control, donor2.CNhs13214.11777-124A47.13
CD41+ megakaryocyte control, donor3.CNhs13201.11779-124A66.37
Clontech Mouse Universal Reference Total RNA, pool1.CNhs10609.10001-101A39.35
EBF KO HPCs induced to T cell, 00hr00min, biol_rep1.CNhs11058.12972-138H27.45
EBF KO HPCs induced to T cell, 00hr00min, biol_rep2.CNhs12980.12988-138I94.96
Follicle Associated Epithelium, pool2.CNhs13211.10262-104D17.36
Follicle Associated Epithelium, pool3.CNhs13200.10263-104D24.82
GP2+ M cell, pool1.CNhs13228.11845-124H96.89
GP2+ M cell, pool2.CNhs13231.11846-124I14.74
GP2+ M cell, pool3.CNhs13240.11847-124I24.52
Ileum epithelium, pool1.CNhs13199.10252-104B97.98
Ileum epithelium, pool2.CNhs13232.10253-104C16.55
Ileum epithelium, treated with RANKL, day03, pool3.CNhs13234.10260-104C85.99
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep1.CNhs12449.13063-139I38.89
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep2.CNhs12668.13129-140G69.84
J2E erythroblastic leukemia response to erythropoietin, 00hr00min, biol_rep3.CNhs12770.13195-141E915.85
Lgr5 positive intestinal stem cells, pool1.CNhs12555.12228-129F56.93
Lgr5 positive intestinal stem cells, pool2.CNhs12556.12229-129F65.98
Lgr5 positive intestinal stem cells, pool3.CNhs12557.12230-129F76.13
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor1 (10,11,12 3LL).CNhs12539.12159-128G84.19
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor2 (0127 3LL).CNhs12198.12161-128H13.91
MC1+Gr1+ myeloid-derived suppressor cells cancer, donor3 (0128 3LL).CNhs12542.12163-128H35.24
MC1+Gr1+ myeloid-derived suppressor cells control, donor1 (4,5,6PBS).CNhs12540.12160-128G93.53
MC1+Gr1+ myeloid-derived suppressor cells control, donor2 (0127 PBS).CNhs12541.12162-128H23.42
MC1+Gr1+ myeloid-derived suppressor cells control, donor3 (0128 PBS).CNhs12543.12164-128H44.37
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep1.CNhs11055.11484-119D811.33
Mouse Aortic Smooth Muscle cells - differentiated, biol_rep2.CNhs11056.11485-119D911.66
Mouse Aortic Smooth Muscle cells, donor1.CNhs11297.11299-117B38.26
Mouse Astrocytes - cerebellar, donor1.CNhs13077.11708-123B716.43
Mouse Astrocytes - cerebellar, donor2.CNhs12076.11550-120C28.07
Mouse Astrocytes - hippocampus, donor1.CNhs12129.11709-123B87.03
Mouse Astrocytes - hippocampus, donor2.CNhs12077.11551-120C37.39
Mouse Astrocytes, donor2.CNhs12078.11552-120C48.54
Mouse Astrocytes, donor3.CNhs12107.11633-122C47.19
Mouse CD19+ B Cells, donor1.CNhs13531.11856-125A212.58
Mouse CD4+ T Cells, donor1.CNhs13509.11854-124I97.98
Mouse CD8+ T Cells, donor1.CNhs13511.11855-125A19.41
Mouse Cardiac Myocytes, donor1.CNhs12355.11711-123C17.98
Mouse Cardiac Myocytes, donor2.CNhs12356.11729-123E18.02
Mouse Cardiac Myocytes, donor3.CNhs12353.11634-122C53.09
Mouse Granule cells, donor1.CNhs12131.11713-123C39.51
Mouse Granule cells, donor2.CNhs12357.11731-123E310.05
Mouse Granule cells, donor3.CNhs12108.11636-122C79.51
Mouse Meningeal cells, donor1.CNhs12132.11716-123C65.42
Mouse Meningeal cells, donor3.CNhs12109.11639-122D113.34
Mouse Mesenchymal stem cells - bone marrow derived, donor1.CNhs12628.11717-123C77.65
Mouse Mesenchymal stem cells - bone marrow derived, donor2.CNhs12633.11735-123E711.87
Mouse Mesenchymal stem cells - bone marrow derived, donor3.CNhs12616.11640-122D29.24
Mouse Microglia, donor1.CNhs12629.11718-123C811.98
Mouse Microglia, donor2.CNhs12634.11736-123E810.37
Mouse Neurons - cortical, donor1.CNhs12025.11724-123D55.08
Mouse Neurons - cortical, donor2.CNhs11947.11742-123F57.97
Mouse Neurons - cortical, donor3.CNhs12112.11647-122D97.36
Mouse Neurons - dorsal spinal cord, donor2.CNhs12635.11738-123F15.43
Mouse Neurons - dorsal spinal cord, donor3.CNhs12618.11643-122D57.73
Mouse Neurons - hippocampal, donor1.CNhs12133.11721-123D27.23
Mouse Neurons - hippocampal, donor2.CNhs12359.11739-123F28.63
Mouse Neurons - hippocampal, donor3.CNhs12110.11644-122D66.43
Mouse Neurons - raphe, donor1.CNhs12631.11722-123D326.43
Mouse Neurons - raphe, donor2.CNhs12636.11740-123F328.09
Mouse Neurons - raphe, donor3.CNhs12619.11645-122D720.28
Mouse Neurons - striatal, donor1.CNhs12134.11723-123D412.66
Mouse Neurons - striatal, donor2.CNhs12360.11741-123F49.70
Mouse Neurons - striatal, donor3.CNhs12111.11646-122D87.29
Mouse Neurons - substantia nigra, donor4, tech_rep1.CNhs12612.11489-119E421.78
Mouse Neurons - substantia nigra, donor5.CNhs12614.11490-119E516.32
Mouse Neurons - substantia nigra, donor6.CNhs12643.11770-123I618.95
Mouse Neurons - ventral spinal cord, donor1.CNhs12632.11725-123D67.37
Mouse Neurons - ventral spinal cord, donor2.CNhs12638.11743-123F65.13
Mouse Neurons - ventral spinal cord, donor3.CNhs12113.11648-122E18.95
Mouse Schwann, donor1.CNhs12507.11728-123D915.98
Mouse Schwann, donor2.CNhs12573.11746-123F916.25
Mouse hepatic Sinusoidal Endothelial Cells, donor1.CNhs13209.11830-124G35.80
Mouse hepatic Stellate Cells (lipocyte), donor1.CNhs13196.11825-124F76.02
Mouse hepatocyte, donor1.CNhs13078.11714-123C44.76
Mouse hepatocyte, donor3.CNhs12615.11637-122C82.70
Mouse hepatocyte, donor6.CNhs13090.11822-124F43.25
Mouse hepatocyte, donor8.CNhs13091.11824-124F61.34
SABiosciences XpressRef Mouse Universal Total RNA, pool1.CNhs10611.10003-101A77.58
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep1 (000hC4).CNhs11939.12338-130I716.36
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep2 (000hC5).CNhs13275.12460-132E38.83
ST2 (Mesenchymal stem cells) cells, medium change (without induction), 00hr, biol_rep3 (000hC6).CNhs13324.12582-133I88.83
Sox2+ Supporting cells - organ of corti, pool1.CNhs12532.12157-128G65.35
TSt-4/DLL1 feeder cells, biol_rep1.CNhs13407.12971-138H17.70
TSt-4/DLL1 feeder cells, biol_rep2.CNhs13408.12987-138I85.10
TSt-4/DLL1 feeder cells, biol_rep3.CNhs13409.13003-139B60.00
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep1.CNhs13739.13367-143G16.06
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep2.CNhs13740.13368-143G25.32
Tracheal epithelial cells, differentiation to ciliated epithelial cells, 000hr, biol_rep3.CNhs13741.13369-143G34.55
Universal RNA - Mouse Normal Tissues Biochain, pool1.CNhs10613.10008-101B66.51
accessory axillary lymph node, adult.CNhs10475.1063-29H96.99
adrenal gland, adult.CNhs10508.49-24D715.29
adrenal gland, embryo E14.CNhs11038.406-44C58.85
adrenal gland, embryo E16.CNhs11004.1254-43D611.87
adrenal gland, embryo E17.CNhs11043.1263-45I110.38
adrenal gland, embryo E18.CNhs11026.1262-18F510.40
adrenal gland, neonate N00.CNhs11191.1311-23C112.11
adrenal gland, neonate N25.CNhs11223.1377-27I39.93
amnion, adult pregnant day17.5.CNhs10488.583-22A810.88
aorta, adult.CNhs10498.46-23H113.45
bone (os femoris), adult.CNhs10483.56-12G28.85
bone (os femoris), neonate N02.CNhs11227.1985-43F59.54
bone (os femoris), neonate N16.CNhs11225.1525-43A67.95
bone (os femoris), neonate N20.CNhs11195.1350-25C311.15
cecum, adult.CNhs10467.37-13H41.86
cerebellum, adult.CNhs10494.15-8B225.18
cerebellum, neonate N30.CNhs11135.1395-42I219.69
colon, adult.CNhs10468.36-18H79.45
common myeloid progenitor CMP, biol_rep1.CNhs12550.12122-128C74.79
common myeloid progenitor CMP, biol_rep2.CNhs12203.12125-128D10.60
common myeloid progenitor CMP, biol_rep3.CNhs12551.12128-128D44.96
corpora quadrigemina, adult.CNhs10501.16-22A423.97
corpus striatum, adult.CNhs10487.19-21D844.38
corpus striatum, neonate N00.CNhs11226.630-43F19.42
cortex, adult.CNhs10473.12-14D553.54
cortex, neonate N30.CNhs11107.1392-42F246.80
diencephalon, adult.CNhs10482.20-12F230.34
diencephalon, neonate N30.CNhs11201.1388-42B232.61
epididymis and seminiferous tubule, neonate N00.CNhs11218.1310-23B15.80
epididymis and seminiferous tubule, neonate N30.CNhs11199.1387-42A28.58
epididymis, adult.CNhs10490.58-23B24.04
eyeball, adult.CNhs10484.31-12G46.31
eyeball, embryo E12.CNhs11016.345-16C65.99
eyeball, embryo E14.CNhs10521.399-16E24.37
eyeball, embryo E15.CNhs10593.426-16C95.22
eyeball, embryo E17.CNhs11023.1261-18D48.14
eyeball, neonate N00.CNhs11207.633-15C65.99
eyeball, neonate N01.CNhs11140.1532-43E75.38
eyeball, neonate N02.CNhs11205.1551-44G85.90
eyeball, neonate N16.CNhs11188.777-19A27.76
forelimb, embryo E11.CNhs10596.335-25E27.33
forelimb, embryo E12.CNhs10600.359-14H22.84
forelimb, embryo E13.CNhs10589.384-1E24.75
forelimb, embryo E14.CNhs10577.413-26A85.26
forelimb, embryo E15.CNhs11007.437-20E77.51
forelimb, embryo E17.CNhs10598.1517-43C45.92
forelimb, embryo E18.CNhs11008.1520-43B56.59
gonad, embryo E13.CNhs11044.1564-45I65.37
granulocyte macrophage progenitor GMP, biol_rep1.CNhs12206.12123-128C84.92
granulocyte macrophage progenitor GMP, biol_rep2.CNhs12202.12126-128D27.21
granulocyte macrophage progenitor GMP, biol_rep3.CNhs11928.12129-128D56.82
heart, embryo E11.CNhs10586.331-24E96.42
heart, embryo E12.CNhs11015.353-12F54.22
heart, embryo E13.CNhs11013.376-3I96.30
heart, embryo E14.CNhs10597.403-26D46.16
heart, embryo E15.CNhs11017.431-16C87.28
heart, embryo E16.CNhs11021.457-17C66.94
heart, embryo E17.CNhs11025.479-18E58.14
heart, embryo E18.CNhs11030.1283-20G38.58
heart, neonate N00.CNhs11213.639-21E37.01
heart, neonate N03.CNhs11221.1349-25I210.37
heart, neonate N10.CNhs11118.749-24G18.54
heart, neonate N16.CNhs11209.782-15G112.08
heart, neonate N20.CNhs11127.821-26I610.38
heart, neonate N25.CNhs11196.1351-25D312.95
heart, neonate N30.CNhs11202.1390-42D29.53
hippocampus, adult.CNhs10478.13-16E835.33
hippocampus, neonate N00.CNhs11228.627-43G19.78
intestinal mucosa, adult.CNhs10506.860-29I34.96
intestine, adult.CNhs10496.178-9A36.61
intestine, embryo E12.CNhs11019.1251-16I57.04
intestine, embryo E13.CNhs11010.381-16D55.11
intestine, embryo E15.CNhs10602.976-16D87.60
intestine, embryo E16.CNhs10585.463-22H48.67
intestine, embryo E17.CNhs10582.482-18D38.01
intestine, embryo E18.CNhs10526.1289-20F77.80
intestine, neonate N00.CNhs11126.644-26D18.54
intestine, neonate N01.CNhs11192.1322-23E910.54
intestine, neonate N06.CNhs11102.688-20B89.30
intestine, neonate N07.CNhs11095.720-20F210.54
intestine, neonate N10.CNhs11098.755-23A58.38
intestine, neonate N20.CNhs11187.827-18D17.19
intestine, neonate N25.CNhs11121.1352-25E35.84
intestine, neonate N30.CNhs11131.1384-42G18.56
kidney, embryo E14.CNhs10606.411-4I97.97
kidney, embryo E15.CNhs10997.434-16F89.60
kidney, embryo E16.CNhs10584.464-22A56.76
kidney, embryo E17.CNhs11028.483-18I26.92
kidney, embryo E18.CNhs11001.1288-20C77.18
kidney, neonate N00.CNhs11214.646-21G77.22
kidney, neonate N10.CNhs11206.758-6D58.03
kidney, neonate N20.CNhs11113.832-19I16.49
kidney, neonate N25.CNhs11122.1353-25F36.44
kidney, neonate N30.CNhs11203.1385-42H17.65
liver, adult pregnant day01.CNhs10466.508-5B21.78
liver, embryo E12.CNhs10601.355-15F88.01
liver, embryo E13.CNhs10524.378-3H69.24
liver, embryo E14.CNhs10594.409-16E16.75
liver, embryo E15.CNhs10520.433-16D74.46
liver, embryo E16.CNhs10523.462-17F58.68
liver, embryo E17.CNhs10510.481-18A37.13
liver, embryo E18.CNhs10579.499-43G44.89
liver, neonate N00.CNhs11117.641-24F45.84
liver, neonate N03.CNhs11123.1345-25G24.94
liver, neonate N06.CNhs11101.684-20A84.31
liver, neonate N07.CNhs11103.716-20H28.19
liver, neonate N10.CNhs11115.751-24B96.24
liver, neonate N20.CNhs11220.823-25A34.29
liver, neonate N25.CNhs11198.1368-26H13.95
liver, neonate N30.CNhs11106.1382-42D14.82
lung, adult.CNhs10474.28-22B19.24
lung, embryo E12.CNhs10522.354-16G25.12
lung, embryo E14.CNhs10604.404-26F88.96
lung, embryo E15.CNhs11020.432-17C59.68
lung, embryo E16.CNhs10998.458-17B69.15
lung, embryo E17.CNhs10605.480-44A69.21
lung, embryo E18.CNhs10583.1287-20I610.47
lung, neonate N00.CNhs11224.640-42C68.59
lung, neonate N06.CNhs11212.683-20E515.61
lung, neonate N07.CNhs11111.715-19A313.07
lung, neonate N10.CNhs11219.750-23E613.39
lung, neonate N20.CNhs11109.822-18A49.18
lung, neonate N25.CNhs11119.1359-25C78.81
lung, neonate N30.CNhs11133.1394-42H210.70
macrophage, bone marrow derived, pool1.CNhs11457.3560-170A16.03
macrophage, bone marrow derived, pool2.CNhs11532.3632-171A15.98
mammary gland, adult lactating day02.CNhs10480.595-22B66.88
mammary gland, adult pregnant day19.CNhs10476.588-5H25.79
medulla oblongata, adult.CNhs10477.17-12C227.61
medulla oblongata, neonate N30.CNhs11200.1396-42A328.25
mouse fibroblast cell line: CRL-1658 NIH/3T3.CNhs11093.1830-49C712.95
muscle (biceps femoris), neonate N30.CNhs11129.1389-42C27.57
neurospheres - enteric neuron derived, biol_rep1.CNhs13087.11810-124E15.05
neurospheres - enteric neuron derived, biol_rep2.CNhs13088.11811-124E28.20
neurospheres - enteric neuron derived, biol_rep3.CNhs13089.11812-124E37.54
neurospheres - parasympathetic neuron derived, biol_rep1.CNhs13084.11807-124D78.36
neurospheres - parasympathetic neuron derived, biol_rep2.CNhs13085.11808-124D812.25
neurospheres - parasympathetic neuron derived, biol_rep3.CNhs13086.11809-124D99.91
neurospheres - sympathetic neuron derived, biol_rep1.CNhs13081.11804-124D45.26
neurospheres - sympathetic neuron derived, biol_rep2.CNhs13082.11805-124D58.18
neurospheres - sympathetic neuron derived, biol_rep3.CNhs13083.11806-124D65.14
olfactory brain, adult.CNhs10489.18-22I949.80
ovary, adult.CNhs10507.91-2I78.94
ovary, embryo E18.CNhs11040.505-44H77.48
ovary, neonate N00.CNhs11217.1299-22I46.03
oviduct, adult pregnant day01.CNhs10500.988-6G66.93
pancreas, adult.CNhs10486.34-16E47.96
pancreas, embryo E14.CNhs11012.405-44F44.86
pancreas, embryo E15.CNhs11042.1556-45F23.93
pancreas, embryo E16.CNhs11003.460-26E55.66
pancreas, embryo E17.CNhs10599.1558-45G38.27
pancreas, embryo E18.CNhs10580.1535-43I75.84
pancreas, neonate N00.CNhs11105.645-26G98.27
pancreas, neonate N01.CNhs11138.1531-43D77.27
pancreas, neonate N02.CNhs11139.1539-43D86.42
pancreas, neonate N16.CNhs11136.787-43B65.69
pancreas, neonate N25.CNhs11094.1555-45E25.27
pancreas, neonate N30.CNhs11182.1548-44H52.06
pituitary gland, adult.CNhs10493.21-1G87.15
pituitary gland, embryo E12.CNhs11018.346-16E63.78
pituitary gland, embryo E13.CNhs11009.370-44C74.53
pituitary gland, embryo E14.CNhs11037.398-44A55.14
pituitary gland, embryo E15.CNhs10592.427-16B94.97
pituitary gland, embryo E16.CNhs11036.449-43F65.53
pituitary gland, embryo E17.CNhs11039.1265-44F54.61
pituitary gland, neonate N00.CNhs11190.1308-22E96.70
placenta, adult pregnant day10.CNhs10472.539-13I711.97
placenta, adult pregnant day17.CNhs10464.577-18G35.72
prostate, adult.CNhs10470.859-1F85.29
skin, adult.CNhs10492.30-1C36.10
skin, neonate N00.CNhs11124.650-25G47.43
skin, neonate N03.CNhs11215.662-22H39.77
skin, neonate N06.CNhs11097.693-20I57.04
skin, neonate N10.CNhs11108.762-6C48.37
small intestine, neonate N16.CNhs11114.790-21I18.74
spinal cord, adult.CNhs10505.24-13C923.55
spleen, adult.CNhs10465.25-2G25.13
spleen, embryo E16.CNhs11035.461-43C16.40
spleen, embryo E18.CNhs11011.1271-21F29.63
spleen, neonate N10.CNhs11116.752-24D110.93
spleen, neonate N20.CNhs11112.824-19H111.07
spleen, neonate N25.CNhs11099.1354-25G38.24
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep1.CNhs12534.12121-128C66.29
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep2.CNhs12535.12124-128C98.40
stem cell (cKit+ Sca1- lineage-) KSL, biol_rep3.CNhs12536.12127-128D39.26
stomach, adult.CNhs10503.33-1H65.73
stomach, embryo E12.CNhs10588.356-43E36.96
stomach, embryo E15.CNhs10603.1252-16G86.91
stomach, embryo E16.CNhs11022.459-17D45.29
stomach, embryo E17.CNhs11006.1035-18D55.44
stomach, embryo E18.CNhs10999.1286-20C65.24
stomach, neonate N03.CNhs11193.1340-24B85.66
stomach, neonate N07.CNhs11210.718-18A96.36
stomach, neonate N25.CNhs11104.1355-25E43.93
stomach, neonate N30.CNhs11134.1386-42I15.57
submandibular gland, adult.CNhs10469.59-29C17.46
testis, adult.CNhs10504.57-7G55.07
testis, embryo E13.CNhs11031.389-23F58.07
testis, embryo E15.CNhs11034.443-27C56.12
testis, embryo E16.CNhs11033.470-26G57.00
testis, embryo E17.CNhs11029.486-18I56.20
testis, embryo E18.CNhs11027.503-18G56.59
testis, neonate N00.CNhs11189.1300-22B76.22
testis, neonate N07.CNhs11222.726-26I48.72
testis, neonate N10.CNhs11204.763-44D912.69
testis, neonate N20.CNhs11110.839-18H39.42
testis, neonate N30.CNhs11130.1391-42E25.76
thymus, adult.CNhs10471.38-12B56.64
thymus, embryo E14.CNhs11041.402-44I46.69
thymus, embryo E15.CNhs11005.430-45I25.85
thymus, embryo E16.CNhs11002.456-26C58.06
thymus, embryo E17.CNhs10581.478-18C18.41
thymus, embryo E18.CNhs10595.1273-19G48.15
thymus, neonate N02.CNhs11181.1541-43F84.93
thymus, neonate N03.CNhs11137.2104-43C76.65
thymus, neonate N06.CNhs11197.681-26C45.76
thymus, neonate N07.CNhs11211.713-19D35.79
thymus, neonate N10.CNhs11194.748-24E46.15
thymus, neonate N20.CNhs11186.820-7A26.72
thymus, neonate N25.CNhs11125.1362-25G75.97
thymus, neonate N30.CNhs11132.1393-42G25.73
tongue, adult.CNhs10499.32-1B46.12
trophoblast stem cell line B1 differentiation, day00, biol_rep1.CNhs13526.13297-142H38.66
trophoblast stem cell line R1AB differentiation, day00, biol_rep1.CNhs13481.13283-142F713.82
trophoblast stem cell line Rybp differentiation, day00, biol_rep1.CNhs13519.13290-142G57.72
urinary bladder, adult.CNhs10481.879-12E47.73
uterus, adult pregnant day19.CNhs10497.590-15F55.82
uterus, adult.CNhs10509.92-27E55.13
vagina, adult.CNhs10502.89-27D57.07
vesicular gland, adult.CNhs10491.51-27F84.01
visual cortex - wildtype, neonate N15, donor1.CNhs13031.10235-104A131.06
visual cortex - wildtype, neonate N15, donor2.CNhs13032.10236-104A241.43
visual cortex - wildtype, neonate N15, donor3.CNhs13033.10237-104A332.66
visual cortex - wildtype, neonate N15, donor5.CNhs13820.10349-105D733.34
visual cortex - wildtype, neonate N30, donor1.CNhs13034.10238-104A440.42
visual cortex - wildtype, neonate N30, donor2.CNhs13035.10239-104A533.24
visual cortex - wildtype, neonate N30, donor3.CNhs13036.10240-104A639.83
visual cortex - wildtype, neonate N60-70, donor1.CNhs13037.10241-104A746.83
visual cortex - wildtype, neonate N60-70, donor2.CNhs13038.10242-104A849.85
visual cortex - wildtype, neonate N60-70, donor3.CNhs13039.10243-104A957.99
whole body, embryo E11.CNhs11014.324-5I87.06
whole body, embryo E12.CNhs10587.857-27C96.38
whole body, embryo E13.CNhs10512.372-23H27.17
whole body, embryo E14.5.CNhs10578.420-27D26.08
whole body, embryo E14.CNhs10519.395-14B17.76
whole body, embryo E16.CNhs10514.453-14F26.99
whole body, embryo E17.5, pool1 (internal control).CNhs10479.3139-67G58.22
whole body, embryo E17.5, pool1 (internal control).CNhs10495.3139-67G59.48
whole body, embryo E17.5, pool1 (internal control).CNhs10511.3139-67G59.63
whole body, embryo E17.5, pool1 (internal control).CNhs10527.3139-67G56.32
whole body, embryo E17.5, pool1 (internal control).CNhs10591.3139-67G59.89
whole body, embryo E17.5, pool1 (internal control).CNhs10607.3139-67G58.30
whole body, embryo E17.5, pool1 (internal control).CNhs10623.3139-67G57.77
whole body, embryo E17.5, pool1 (internal control).CNhs10639.3139-67G57.49
whole body, embryo E17.5, pool1 (internal control).CNhs10655.3139-67G57.52
whole body, embryo E17.5, pool1 (internal control).CNhs10725.3139-67G57.62
whole body, embryo E17.5, pool1 (internal control).CNhs10749.3139-67G59.39
whole body, embryo E17.5, pool1 (internal control).CNhs10840.3139-67G58.68
whole body, embryo E17.5, pool1 (internal control).CNhs10856.3139-67G56.18
whole body, embryo E17.5, pool1 (internal control).CNhs10880.3139-67G58.10
whole body, embryo E17.5, pool1 (internal control).CNhs11000.3139-67G59.26
whole body, embryo E17.5, pool1 (internal control).CNhs11024.3139-67G58.52
whole body, embryo E17.5, pool1 (internal control).CNhs11032.3139-67G57.87
whole body, embryo E17.5, pool1 (internal control).CNhs11048.3139-67G56.83
whole body, embryo E17.5, pool1 (internal control).CNhs11072.3139-67G56.49
whole body, embryo E17.5, pool1 (internal control).CNhs11080.3139-67G57.70
whole body, embryo E17.5, pool1 (internal control).CNhs11096.3139-67G59.51
whole body, embryo E17.5, pool1 (internal control).CNhs11120.3139-67G58.16
whole body, embryo E17.5, pool1 (internal control).CNhs11128.3139-67G59.10
whole body, embryo E17.5, pool1 (internal control).CNhs11184.3139-67G56.17
whole body, embryo E17.5, pool1 (internal control).CNhs11208.3139-67G59.49
whole body, embryo E17.5, pool1 (internal control).CNhs11216.3139-67G58.77
whole body, embryo E17.5, pool1 (internal control).CNhs11246.3139-67G54.50
whole body, embryo E17.5, pool1 (internal control).CNhs11278.3139-67G56.51
whole body, embryo E17.5.CNhs10513.490-9F97.72
whole body, embryo E17.CNhs10517.475-3I58.24
whole body, embryo E18.CNhs10516.493-3B35.38
whole body, neonate N00.CNhs10525.657-19C28.81
whole body, neonate N01.CNhs10576.659-23C66.50
whole body, neonate N06.CNhs10515.692-21D110.15
whole body, neonate N10.CNhs10518.761-6B48.58





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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data

Uber anatomy
Ontology termp-valuen
nervous system1.32e-0975
central nervous system8.56e-0973
brain grey matter1.48e-0829
regional part of telencephalon1.48e-0829
telencephalon1.48e-0829
brain4.55e-0847
future brain4.55e-0847
occipital lobe5.94e-0810
visual cortex5.94e-0810
neocortex5.94e-0810
regional part of nervous system7.88e-0854
regional part of brain1.47e-0746
gray matter5.17e-0734
neural tube5.68e-0752
neural rod5.68e-0752
future spinal cord5.68e-0752
neural keel5.68e-0752
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