FFCP PHASE1:Mm9::chr18:64639050..64639061,-: Difference between revisions
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{{FFCP|EntrezGene=NA|HGNC=|MCL_coexpression_id=416|UniProt=NA|association_with_transcript=NA|description=CAGE_peak_at_chr18:64639050..64639061,-|id=chr18:64639050..64639061,-|ontology_enrichment_celltype=CL:0000181!3.04e-12!5;CL:0000417!3.04e-12!5;CL:0000668!3.04e-12!5;CL:0000412!3.04e-12!5;CL:0000182!3.04e-12!5|ontology_enrichment_celltype_v019_2=CL:0000182,2.50e-16,5;CL:0000057,5.62e-10,1;CL:0000632,5.62e-10,1|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0005172!1.01e-32!49;UBERON:0005173!1.01e-32!49;UBERON:0002417!1.01e-32!49;UBERON:0000916!1.01e-32!49;UBERON:0002107!1.57e-31!22;UBERON:0007499!1.57e-31!22;UBERON:0006925!1.57e-31!22;UBERON:0009497!1.57e-31!22;UBERON:0000015!1.57e-31!22;UBERON:0002423!1.57e-31!22;UBERON:0006235!1.57e-31!22;UBERON:0008835!1.57e-31!22;UBERON:0003894!1.57e-31!22;UBERON:0004161!1.57e-31!22;UBERON:0008836!1.57e-31!22;UBERON:0009854!5.92e-30!23;UBERON:0009856!5.92e-30!23;UBERON:0002365!3.54e-27!25;UBERON:0002330!3.54e-27!25;UBERON:0009569!1.75e-22!66;UBERON:0005256!5.46e-17!47;UBERON:0005177!6.85e-16!85;UBERON:0003914!2.45e-15!47;UBERON:0002113!5.54e-13!14;UBERON:0003918!5.54e-13!14;UBERON:0005095!5.54e-13!14;UBERON:0007687!5.54e-13!14;UBERON:0002100!7.34e-13!98;UBERON:0006554!4.08e-11!16;UBERON:0005057!5.80e-11!51;UBERON:0001008!2.39e-10!17;UBERON:0003929!7.66e-10!55;UBERON:0002368!9.64e-10!60;UBERON:0002530!1.22e-08!65;UBERON:0000489!5.16e-08!21;UBERON:0003104!6.68e-08!131;UBERON:0009142!6.68e-08!131;UBERON:0000490!1.77e-07!66;UBERON:0000949!2.32e-07!72;UBERON:0000466!3.81e-07!79;UBERON:0005911!5.70e-07!69;UBERON:0002405!8.22e-07!70;UBERON:0004871!8.37e-07!3|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.90e-32,22;UBERON:0007499,7.90e-32,22;UBERON:0006925,7.90e-32,22;UBERON:0009497,7.90e-32,22;UBERON:0000015,7.90e-32,22;UBERON:0002423,7.90e-32,22;UBERON:0006235,7.90e-32,22;UBERON:0008835,7.90e-32,22;UBERON:0003894,7.90e-32,22;UBERON:0004161,7.90e-32,22;UBERON:0008836,7.90e-32,22;UBERON:0009854,1.96e-30,23;UBERON:0009856,1.96e-30,23;UBERON:0002365,5.58e-28,25;UBERON:0002330,5.58e-28,25;UBERON:0005256,2.16e-15,45;UBERON:0003914,1.02e-14,47;UBERON:0005172,4.22e-14,49;UBERON:0005173,4.22e-14,49;UBERON:0002417,4.22e-14,49;UBERON:0000916,4.22e-14,49;UBERON:0003929,1.63e-12,55;UBERON:0002368,1.98e-11,60;UBERON:0003104,3.10e-11,61;UBERON:0009142,3.10e-11,61;UBERON:0002530,1.64e-10,65;UBERON:0000490,2.41e-10,66;UBERON:0009569,2.41e-10,66;UBERON:0005911,7.15e-10,69;UBERON:0000949,1.94e-09,72;UBERON:0005177,1.49e-08,79;UBERON:0001041,1.94e-08,80;UBERON:0002100,1.96e-07,90|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,1.72084775396277,1.3599426674155,1.61910957491345,0.649776417447669,6.2723764193627,0.421333260395256,0,0,0,0,0,0,0,0,0,0,2.16949371466214,0,0,0.173485326766136,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0.140271639780637,0.0632365371242573,0.295220295959204,0.941992367048249,0.616985819609003,8.30067355844017,0,0,0.224862112384854,0,0.72353147925725,0.25462585178142,0,1.13494658742525,0.274561413188081,2.87536413054709,3.72140947668503,0.312037673114561,0.505157755894224,0.717589654087649,5.78932225636041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0|short_description=p@chr18:64639050..64639061,-}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=NA | |||
|HGNC= | |||
|MCL_coexpression_id=416 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr18:64639050..64639061,- | |||
|description=CAGE_peak_at_chr18:64639050..64639061,- | |||
|id=chr18:64639050..64639061,- | |||
|ontology_enrichment_celltype=CL:0000181!3.04e-12!5;CL:0000417!3.04e-12!5;CL:0000668!3.04e-12!5;CL:0000412!3.04e-12!5;CL:0000182!3.04e-12!5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000182,2.50e-16,5;CL:0000057,5.62e-10,1;CL:0000632,5.62e-10,1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005172!1.01e-32!49;UBERON:0005173!1.01e-32!49;UBERON:0002417!1.01e-32!49;UBERON:0000916!1.01e-32!49;UBERON:0002107!1.57e-31!22;UBERON:0007499!1.57e-31!22;UBERON:0006925!1.57e-31!22;UBERON:0009497!1.57e-31!22;UBERON:0000015!1.57e-31!22;UBERON:0002423!1.57e-31!22;UBERON:0006235!1.57e-31!22;UBERON:0008835!1.57e-31!22;UBERON:0003894!1.57e-31!22;UBERON:0004161!1.57e-31!22;UBERON:0008836!1.57e-31!22;UBERON:0009854!5.92e-30!23;UBERON:0009856!5.92e-30!23;UBERON:0002365!3.54e-27!25;UBERON:0002330!3.54e-27!25;UBERON:0009569!1.75e-22!66;UBERON:0005256!5.46e-17!47;UBERON:0005177!6.85e-16!85;UBERON:0003914!2.45e-15!47;UBERON:0002113!5.54e-13!14;UBERON:0003918!5.54e-13!14;UBERON:0005095!5.54e-13!14;UBERON:0007687!5.54e-13!14;UBERON:0002100!7.34e-13!98;UBERON:0006554!4.08e-11!16;UBERON:0005057!5.80e-11!51;UBERON:0001008!2.39e-10!17;UBERON:0003929!7.66e-10!55;UBERON:0002368!9.64e-10!60;UBERON:0002530!1.22e-08!65;UBERON:0000489!5.16e-08!21;UBERON:0003104!6.68e-08!131;UBERON:0009142!6.68e-08!131;UBERON:0000490!1.77e-07!66;UBERON:0000949!2.32e-07!72;UBERON:0000466!3.81e-07!79;UBERON:0005911!5.70e-07!69;UBERON:0002405!8.22e-07!70;UBERON:0004871!8.37e-07!3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002107,7.90e-32,22;UBERON:0007499,7.90e-32,22;UBERON:0006925,7.90e-32,22;UBERON:0009497,7.90e-32,22;UBERON:0000015,7.90e-32,22;UBERON:0002423,7.90e-32,22;UBERON:0006235,7.90e-32,22;UBERON:0008835,7.90e-32,22;UBERON:0003894,7.90e-32,22;UBERON:0004161,7.90e-32,22;UBERON:0008836,7.90e-32,22;UBERON:0009854,1.96e-30,23;UBERON:0009856,1.96e-30,23;UBERON:0002365,5.58e-28,25;UBERON:0002330,5.58e-28,25;UBERON:0005256,2.16e-15,45;UBERON:0003914,1.02e-14,47;UBERON:0005172,4.22e-14,49;UBERON:0005173,4.22e-14,49;UBERON:0002417,4.22e-14,49;UBERON:0000916,4.22e-14,49;UBERON:0003929,1.63e-12,55;UBERON:0002368,1.98e-11,60;UBERON:0003104,3.10e-11,61;UBERON:0009142,3.10e-11,61;UBERON:0002530,1.64e-10,65;UBERON:0000490,2.41e-10,66;UBERON:0009569,2.41e-10,66;UBERON:0005911,7.15e-10,69;UBERON:0000949,1.94e-09,72;UBERON:0005177,1.49e-08,79;UBERON:0001041,1.94e-08,80;UBERON:0002100,1.96e-07,90 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255129870453209,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.579728977403356,1.72084775396277,1.3599426674155,1.61910957491345,0.649776417447669,6.2723764193627,0.421333260395256,0,0,0,0,0,0,0,0,0,0,2.16949371466214,0,0,0.173485326766136,0,0,0,0,0,0.494389935468748,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.162241263067758,0.101839363850316,0.248813941220186,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0.140271639780637,0.0632365371242573,0.295220295959204,0.941992367048249,0.616985819609003,8.30067355844017,0,0,0.224862112384854,0,0.72353147925725,0.25462585178142,0,1.13494658742525,0.274561413188081,2.87536413054709,3.72140947668503,0.312037673114561,0.505157755894224,0.717589654087649,5.78932225636041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.320919209591815,0,0,0,0.0936415074698824,0,0,0,0.115884325944855,0,0,0.147198920134397,0,0.177475806159338,0,0,0,0,0,0,0,0,0,0,0,0,0.192906610981141,0,0,0.214871054048298,0,0,0 | |||
|short_description=p@chr18:64639050..64639061,- | |||
}} |
Latest revision as of 00:27, 6 August 2015
Short description: | p@chr18:64639050..64639061, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr18:64639050..64639061, - |
Coexpression cluster: | MCL_coexpression_mm9:416 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hepatocyte | 2.50e-16 | 5 |
fibroblast | 5.62e-10 | 1 |
hepatic stellate cell | 5.62e-10 | 1 |
Ontology term | p-value | n |
---|---|---|
liver | 7.90e-32 | 22 |
epithelial sac | 7.90e-32 | 22 |
digestive gland | 7.90e-32 | 22 |
epithelium of foregut-midgut junction | 7.90e-32 | 22 |
anatomical boundary | 7.90e-32 | 22 |
hepatobiliary system | 7.90e-32 | 22 |
foregut-midgut junction | 7.90e-32 | 22 |
hepatic diverticulum | 7.90e-32 | 22 |
liver primordium | 7.90e-32 | 22 |
septum transversum | 7.90e-32 | 22 |
liver bud | 7.90e-32 | 22 |
digestive tract diverticulum | 1.96e-30 | 23 |
sac | 1.96e-30 | 23 |
exocrine gland | 5.58e-28 | 25 |
exocrine system | 5.58e-28 | 25 |
trunk mesenchyme | 2.16e-15 | 45 |
epithelial tube | 1.02e-14 | 47 |
abdomen element | 4.22e-14 | 49 |
abdominal segment element | 4.22e-14 | 49 |
abdominal segment of trunk | 4.22e-14 | 49 |
abdomen | 4.22e-14 | 49 |
gut epithelium | 1.63e-12 | 55 |
endocrine gland | 1.98e-11 | 60 |
mesenchyme | 3.10e-11 | 61 |
entire embryonic mesenchyme | 3.10e-11 | 61 |
gland | 1.64e-10 | 65 |
unilaminar epithelium | 2.41e-10 | 66 |
subdivision of trunk | 2.41e-10 | 66 |
endo-epithelium | 7.15e-10 | 69 |
endocrine system | 1.94e-09 | 72 |
trunk region element | 1.49e-08 | 79 |
foregut | 1.94e-08 | 80 |
trunk | 1.96e-07 | 90 |