FFCP PHASE1:Mm9::chr16:25802129..25802142,+: Difference between revisions
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{{FFCP|EntrezGene=22061|HGNC=|MCL_coexpression_id=932|UniProt=O88898,Q569E5,Q3UVI3,Q5CZX0|association_with_transcript=127bp_to_ENSMUST00000040231,ENSMUST00000115304,ENSMUST00000115305,ENSMUST00000115306,NM_001127262,NM_001127263,NM_001127264,NM_001127265,NM_011641,uc007yur.2,uc007yus.2,uc007yut.2,uc007yuu.2,uc007yuv.2,uc007yuw.2_5end|description=CAGE_peak_3_at_Trp63_5end|id=chr16:25802129..25802142,+|ontology_enrichment_celltype=|ontology_enrichment_celltype_v019_2=|ontology_enrichment_disease=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0003102!1.19e-09!23;UBERON:0000072!3.28e-09!27;UBERON:0001004!7.25e-08!42;UBERON:0000014!1.42e-07!5;UBERON:0001003!1.42e-07!5;UBERON:0002097!1.42e-07!5;UBERON:0002199!1.42e-07!5;UBERON:0007029!1.42e-07!5;UBERON:0007376!1.42e-07!5;UBERON:0002416!1.42e-07!5;UBERON:0007383!1.42e-07!5;UBERON:0000161!2.67e-07!5;UBERON:0000065!3.75e-07!41;UBERON:0003408!5.89e-07!24;UBERON:0006562!7.52e-07!24;UBERON:0001557!7.52e-07!24;UBERON:0001042!7.52e-07!24;UBERON:0008814!7.52e-07!24;UBERON:0009145!7.52e-07!24|ontology_enrichment_uberon_v019_2=UBERON:0000014,4.27e-23,5;UBERON:0001003,4.27e-23,5;UBERON:0002097,4.27e-23,5;UBERON:0002199,4.27e-23,5;UBERON:0007029,4.27e-23,5;UBERON:0007376,4.27e-23,5;UBERON:0002416,4.27e-23,5;UBERON:0007383,4.27e-23,5;UBERON:0003102,1.70e-19,22;UBERON:0000161,3.69e-15,5;UBERON:0000162,7.68e-15,3;UBERON:0001353,7.68e-15,3;UBERON:0000163,7.68e-15,3;UBERON:0006866,7.68e-15,3;UBERON:0001046,7.68e-15,3;UBERON:0000164,7.68e-15,3;UBERON:0000931,7.68e-15,3;UBERON:0001911,3.78e-10,2;UBERON:0000076,3.78e-10,2;UBERON:0005333,3.78e-10,2;UBERON:0008425,3.78e-10,2;UBERON:0005311,3.78e-10,2;UBERON:0010147,1.17e-09,2;UBERON:0003937,1.17e-09,2;UBERON:0005399,1.17e-09,2;UBERON:0007023,4.24e-09,51;UBERON:0004122,4.24e-09,5;UBERON:0003064,5.09e-08,14|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.865964164044856,0.760079596425296,1.01104889002957,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,2.0217820674694,1.89397670297827,0.130120442962704,0,0,0.452114453507145,0.136072998302656,0.2562274405697,0.0937017245597288,1.03481348295606,1.5089759505299,0.945530400839096,0.175951124163949,0.219195732427575,0,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0,0.163863314715738,0,0,0,0,1.47529281905711,6.34654516500885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42581237860458,3.79238381765404,2.09903754704677,1.5078231232039,2.626191568069,3.77524069413641,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.86404272657441,0.418176592028937,0.218362563746178,0.404593039154462,0.41326727862668,0,0,1.86401793926078,0,0,0,0,0,0,0,0.13020438484395,0,0,0,1.89606672376907,1.41907650703115,0.821687657318618,0.909445760844565,0.358053391334963,1.19208812868759,0.360586348559907,0.443068581523732,0.302899349844443,0.15241361331,0.201652370273681,0.194915761479505,0.0962118416403295,0.116876902181569,0.453460767230423,0,0,0,3.28422309854724,0,0,4.93047271881851,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0,0.252697211763798,0,0.188626341386076,0.280924522409647,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0.25384382367503,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0,0.192906610981141,0.749431733813838,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0|short_description=p3@Trp63}} | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=entrezgene:22061 | |||
|HGNC= | |||
|MCL_coexpression_id=932 | |||
|TSSclassifier=NA | |||
|UniProt=uniprot:O88898,uniprot:Q569E5,uniprot:Q3UVI3,uniprot:Q5CZX0 | |||
|association_with_transcript=127bp_to_ENSMUST00000040231,ENSMUST00000115304,ENSMUST00000115305,ENSMUST00000115306,NM_001127262,NM_001127263,NM_001127264,NM_001127265,NM_011641,uc007yur.2,uc007yus.2,uc007yut.2,uc007yuu.2,uc007yuv.2,uc007yuw.2_5end | |||
|cluster_id=chr16:25802129..25802142,+ | |||
|description=CAGE_peak_3_at_Trp63_5end | |||
|id=chr16:25802129..25802142,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.19e-09!23;UBERON:0000072!3.28e-09!27;UBERON:0001004!7.25e-08!42;UBERON:0000014!1.42e-07!5;UBERON:0001003!1.42e-07!5;UBERON:0002097!1.42e-07!5;UBERON:0002199!1.42e-07!5;UBERON:0007029!1.42e-07!5;UBERON:0007376!1.42e-07!5;UBERON:0002416!1.42e-07!5;UBERON:0007383!1.42e-07!5;UBERON:0000161!2.67e-07!5;UBERON:0000065!3.75e-07!41;UBERON:0003408!5.89e-07!24;UBERON:0006562!7.52e-07!24;UBERON:0001557!7.52e-07!24;UBERON:0001042!7.52e-07!24;UBERON:0008814!7.52e-07!24;UBERON:0009145!7.52e-07!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000014,4.27e-23,5;UBERON:0001003,4.27e-23,5;UBERON:0002097,4.27e-23,5;UBERON:0002199,4.27e-23,5;UBERON:0007029,4.27e-23,5;UBERON:0007376,4.27e-23,5;UBERON:0002416,4.27e-23,5;UBERON:0007383,4.27e-23,5;UBERON:0003102,1.70e-19,22;UBERON:0000161,3.69e-15,5;UBERON:0000162,7.68e-15,3;UBERON:0001353,7.68e-15,3;UBERON:0000163,7.68e-15,3;UBERON:0006866,7.68e-15,3;UBERON:0001046,7.68e-15,3;UBERON:0000164,7.68e-15,3;UBERON:0000931,7.68e-15,3;UBERON:0001911,3.78e-10,2;UBERON:0000076,3.78e-10,2;UBERON:0005333,3.78e-10,2;UBERON:0008425,3.78e-10,2;UBERON:0005311,3.78e-10,2;UBERON:0010147,1.17e-09,2;UBERON:0003937,1.17e-09,2;UBERON:0005399,1.17e-09,2;UBERON:0007023,4.24e-09,51;UBERON:0004122,4.24e-09,5;UBERON:0003064,5.09e-08,14 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,0.865964164044856,0.760079596425296,1.01104889002957,0.11418387971906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101839363850316,0.373220911830279,2.0217820674694,1.89397670297827,0.130120442962704,0,0,0.452114453507145,0.136072998302656,0.2562274405697,0.0937017245597288,1.03481348295606,1.5089759505299,0.945530400839096,0.175951124163949,0.219195732427575,0,0,0.61734640922383,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.312037673114561,0,0,0,0,0.189491411770485,0,0,0,0.167506257441816,0.238043640886014,0,0,0,0,0.163863314715738,0,0,0,0,1.47529281905711,6.34654516500885,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780636154981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.42581237860458,3.79238381765404,2.09903754704677,1.5078231232039,2.626191568069,3.77524069413641,0,0,0,0,0,0,0,0,0,0,0,0.954670618015114,0,0.203319467126849,0.86404272657441,0.418176592028937,0.218362563746178,0.404593039154462,0.41326727862668,0,0,1.86401793926078,0,0,0,0,0,0,0,0.13020438484395,0,0,0,1.89606672376907,1.41907650703115,0.821687657318618,0.909445760844565,0.358053391334963,1.19208812868759,0.360586348559907,0.443068581523732,0.302899349844443,0.15241361331,0.201652370273681,0.194915761479505,0.0962118416403295,0.116876902181569,0.453460767230423,0,0,0,3.28422309854724,0,0,4.93047271881851,1.00314420807073,0,0,0,0,0,0,0,0,0,0,0.415149390336707,0.399024873401031,0,0.243106717068294,0.209613162627982,0.183843508450014,0,0,0,0.252697211763798,0,0.188626341386076,0.280924522409647,0.0640251524048693,0.0574354689556133,0.476293691283074,0,0,0,0.147198920134397,0,0.177475806159338,0.238436189947321,0.145346416632329,0.282328141245992,0.25384382367503,0.182927972872773,0,0.135804113845862,0,0.237270036248348,0.197008964751127,0,0,0.192906610981141,0.749431733813838,0.233931608445408,0.214871054048298,0.191288332068843,0.220591419119515,0 | |||
|short_description=p3@Trp63 | |||
}} |
Revision as of 06:14, 6 August 2015
Short description: | p3@Trp63 |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Trp63_5end |
Coexpression cluster: | MCL_coexpression_mm9:932 |
Association with transcript: | 127bp_to_ENSMUST00000040231, ENSMUST00000115304, ENSMUST00000115305, ENSMUST00000115306, NM_001127262, NM_001127263, NM_001127264, NM_001127265, NM_011641, uc007yur.2, uc007yus.2, uc007yut.2, uc007yuu.2, uc007yuv.2, uc007yuw.2_5end |
EntrezGene: | 22061 |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
zone of skin | 4.27e-23 | 5 |
skin epidermis | 4.27e-23 | 5 |
skin of body | 4.27e-23 | 5 |
integument | 4.27e-23 | 5 |
surface | 4.27e-23 | 5 |
outer epithelium | 4.27e-23 | 5 |
integumental system | 4.27e-23 | 5 |
enveloping layer of ectoderm | 4.27e-23 | 5 |
surface structure | 1.70e-19 | 22 |
orifice | 3.69e-15 | 5 |
cloaca | 7.68e-15 | 3 |
anal region | 7.68e-15 | 3 |
embryonic cloaca | 7.68e-15 | 3 |
terminal part of digestive tract | 7.68e-15 | 3 |
hindgut | 7.68e-15 | 3 |
primitive urogenital sinus | 7.68e-15 | 3 |
proctodeum | 7.68e-15 | 3 |
mammary gland | 3.78e-10 | 2 |
external ectoderm | 3.78e-10 | 2 |
mammary bud | 3.78e-10 | 2 |
mammary ridge | 3.78e-10 | 2 |
mammary placode | 3.78e-10 | 2 |
male accessory sex gland | 1.17e-09 | 2 |
sex gland | 1.17e-09 | 2 |
male reproductive gland | 1.17e-09 | 2 |
adult organism | 4.24e-09 | 51 |
genitourinary system | 4.24e-09 | 5 |
intermediate mesoderm | 5.09e-08 | 14 |