FFCP PHASE2:Hg19::chr2:10263330..10263355,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:6241 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:10452 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=6241 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=10452 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=C9JXC1 | ||
|association_with_transcript=32bp_to_ENST00000474701_5end | |association_with_transcript=32bp_to_ENST00000474701_5end | ||
|cluster_id=chr2:10263330..10263355,+ | |cluster_id=chr2:10263330..10263355,+ |
Latest revision as of 01:12, 16 September 2015
Short description: | p3@RRM2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_RRM2_5end |
Coexpression cluster: | C4112_carcinosarcoma_merkel_small_signet_retinoblastoma_carcinoid_mesenchymal |
Association with transcript: | 32bp_to_ENST00000474701_5end |
EntrezGene: | RRM2 |
HGNC: | 10452 |
UniProt: | C9JXC1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@RRM2 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neural cell | 4.94e-09 | 25 |
erythroid lineage cell | 1.30e-07 | 2 |
erythroblast | 1.30e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 1.30e-07 | 2 |
erythroid progenitor cell | 1.30e-07 | 2 |
reticulocyte | 1.30e-07 | 2 |
proerythroblast | 1.30e-07 | 2 |
basophilic erythroblast | 1.30e-07 | 2 |
polychromatophilic erythroblast | 1.30e-07 | 2 |
orthochromatic erythroblast | 1.30e-07 | 2 |
Showing 1 to 10 of 10 entries
Ontology term | p-value | n |
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larynx | 2.84e-26 | 9 |
upper respiratory tract | 3.49e-17 | 19 |
segment of respiratory tract | 2.25e-09 | 47 |
respiratory primordium | 6.45e-09 | 38 |
endoderm of foregut | 6.45e-09 | 38 |
respiratory tract | 9.57e-08 | 54 |
Showing 1 to 6 of 6 entries
Ontology term | p-value | n |
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carcinoma | 2.35e-10 | 106 |
cell type cancer | 2.97e-09 | 143 |
cancer | 1.16e-08 | 235 |
disease of cellular proliferation | 2.67e-08 | 239 |
Showing 1 to 4 of 4 entries