FFCP PHASE2:Hg19::chr8:127570603..127570648,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:157638 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:24166 |TSScl...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=157638 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=24166 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q96KN1 | ||
|association_with_transcript=0bp_to_ENST00000304916_5end | |association_with_transcript=0bp_to_ENST00000304916_5end | ||
|cluster_id=chr8:127570603..127570648,- | |cluster_id=chr8:127570603..127570648,- | ||
Latest revision as of 04:28, 16 September 2015
| Short description: | p1@FAM84B |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_FAM84B_5end |
| Coexpression cluster: | C86_colon_carcinoid_small_neuroectodermal_giant_large_neuroepithelioma |
| Association with transcript: | 0bp_to_ENST00000304916_5end |
| EntrezGene: | FAM84B |
| HGNC: | 24166 |
| UniProt: | Q96KN1 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@FAM84B |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| epithelial cell | 4.76e-40 | 253 |
| endo-epithelial cell | 1.83e-08 | 42 |
| squamous epithelial cell | 2.27e-08 | 63 |
| endodermal cell | 3.40e-08 | 58 |
| kidney cell | 5.68e-08 | 17 |
| kidney epithelial cell | 5.68e-08 | 17 |
| epithelial cell of nephron | 7.85e-08 | 15 |
Showing 1 to 7 of 7 entries
| Ontology term | p-value | n |
|---|---|---|
| trunk region element | 8.92e-14 | 101 |
| organ system subdivision | 1.36e-11 | 223 |
| ectoderm-derived structure | 4.57e-11 | 171 |
| ectoderm | 4.57e-11 | 171 |
| presumptive ectoderm | 4.57e-11 | 171 |
| cavitated compound organ | 1.01e-10 | 31 |
| renal system | 1.25e-10 | 48 |
| subdivision of trunk | 1.69e-10 | 112 |
| urinary system structure | 2.49e-10 | 47 |
| kidney | 3.66e-10 | 26 |
Showing 1 to 10 of 47 entries
| Ontology term | p-value | n |
|---|---|---|
| carcinoma | 1.11e-17 | 106 |
| cell type cancer | 4.24e-16 | 143 |
| adenocarcinoma | 9.40e-09 | 25 |
| squamous cell carcinoma | 4.95e-07 | 14 |
Showing 1 to 4 of 4 entries
