FFCP PHASE2:Hg19::chr11:124632179..124632199,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:90952 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:17474 |TSScla...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=90952 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=17474 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q96AP7,C9JIE7,B4DVN8 | ||
|association_with_transcript=0bp_to_ENST00000278927,ENST00000435477,ENST00000442070,ENST00000444566_5end | |association_with_transcript=0bp_to_ENST00000278927,ENST00000435477,ENST00000442070,ENST00000444566_5end | ||
|cluster_id=chr11:124632179..124632199,- | |cluster_id=chr11:124632179..124632199,- | ||
Latest revision as of 12:03, 16 September 2015
| Short description: | p1@ESAM |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_1_at_ESAM_5end |
| Coexpression cluster: | C140_Renal_Endothelial_Hepatic_Lymphatic_heart_lung_spleen |
| Association with transcript: | 0bp_to_ENST00000278927, ENST00000435477, ENST00000442070, ENST00000444566_5end |
| EntrezGene: | ESAM |
| HGNC: | 17474 |
| UniProt: | Q96AP7C9JIE7B4DVN8 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p1@ESAM |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| endothelial cell | 5.83e-20 | 36 |
| endothelial cell of vascular tree | 2.13e-19 | 24 |
| blood vessel endothelial cell | 1.64e-15 | 18 |
| embryonic blood vessel endothelial progenitor cell | 1.64e-15 | 18 |
| meso-epithelial cell | 1.90e-15 | 45 |
| endothelial cell of artery | 7.57e-09 | 9 |
| epithelial cell of nephron | 2.53e-08 | 15 |
| kidney cortical cell | 1.14e-07 | 12 |
| renal cortical epithelial cell | 1.14e-07 | 12 |
| lining cell | 3.34e-07 | 58 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| adult organism | 9.48e-53 | 114 |
| tube | 1.51e-25 | 192 |
| anatomical conduit | 3.55e-25 | 240 |
| neural tube | 1.31e-16 | 56 |
| neural rod | 1.31e-16 | 56 |
| future spinal cord | 1.31e-16 | 56 |
| neural keel | 1.31e-16 | 56 |
| regional part of nervous system | 1.60e-15 | 53 |
| regional part of brain | 1.60e-15 | 53 |
| blood vessel endothelium | 1.64e-15 | 18 |
Showing 1 to 10 of 84 entries
