FFCP PHASE2:Hg19::chr1:156786634..156786648,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:9047 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:10821 |TSSclas...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=9047 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=10821 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q5UBZ2,Q5VZS4,Q9NP31 | ||
|association_with_transcript=0bp_to_ENST00000392306,NM_001161441,NM_001161442,NM_001161444,NM_003975,uc001fqd.2,uc001fqe.2,uc009wsh.2,uc010phs.1_5end | |association_with_transcript=0bp_to_ENST00000392306,NM_001161441,NM_001161442,NM_001161444,NM_003975,uc001fqd.2,uc001fqe.2,uc009wsh.2,uc010phs.1_5end | ||
|cluster_id=chr1:156786634..156786648,- | |cluster_id=chr1:156786634..156786648,- |
Latest revision as of 18:26, 17 September 2015
Short description: | p3@SH2D2A |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_SH2D2A_5end |
Coexpression cluster: | C69_anaplastic_CD14_cord_hairy_mycosis_adult_NK |
Association with transcript: | 0bp_to_ENST00000392306, NM_001161441, NM_001161442, NM_001161444, NM_003975, uc001fqd.2, uc001fqe.2, uc009wsh.2, uc010phs.1_5end |
EntrezGene: | SH2D2A |
HGNC: | 10821 |
UniProt: | Q5UBZ2Q5VZS4Q9NP31 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@SH2D2A |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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T cell | 1.69e-38 | 25 |
pro-T cell | 1.69e-38 | 25 |
mature alpha-beta T cell | 1.69e-29 | 18 |
alpha-beta T cell | 1.69e-29 | 18 |
immature T cell | 1.69e-29 | 18 |
mature T cell | 1.69e-29 | 18 |
immature alpha-beta T cell | 1.69e-29 | 18 |
hematopoietic cell | 4.07e-29 | 177 |
lymphoid lineage restricted progenitor cell | 9.64e-29 | 52 |
lymphocyte | 5.17e-28 | 53 |
Showing 1 to 10 of 19 entries
Ontology term | p-value | n |
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blood | 3.86e-16 | 15 |
haemolymphatic fluid | 3.86e-16 | 15 |
organism substance | 3.86e-16 | 15 |
hematopoietic system | 4.08e-10 | 98 |
blood island | 4.08e-10 | 98 |
hemolymphoid system | 3.22e-09 | 108 |
hemopoietic organ | 3.41e-09 | 7 |
immune organ | 3.41e-09 | 7 |
thymus | 1.75e-08 | 4 |
hemolymphoid system gland | 1.75e-08 | 4 |
Showing 1 to 10 of 13 entries
Ontology term | p-value | n |
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chronic leukemia | 1.94e-16 | 8 |
hematologic cancer | 2.34e-16 | 51 |
immune system cancer | 2.34e-16 | 51 |
leukemia | 2.74e-15 | 39 |
myeloid leukemia | 1.03e-10 | 31 |
Showing 1 to 5 of 5 entries