FFCP PHASE1:Hg19::chr1:167599460..167599476,+: Difference between revisions
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=92241 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=28310 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q6JBY9 | ||
|association_with_transcript=0bp_to_NM_052862,uc001gem.2,uc010pli.1_5end | |association_with_transcript=0bp_to_NM_052862,uc001gem.2,uc010pli.1_5end | ||
|cluster_id=chr1:167599460..167599476,+ | |cluster_id=chr1:167599460..167599476,+ | ||
Latest revision as of 11:30, 18 September 2015
| Short description: | p2@RCSD1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_RCSD1_5end |
| Coexpression cluster: | NA |
| Association with transcript: | 0bp_to_NM_052862, uc001gem.2, uc010pli.1_5end |
| EntrezGene: | RCSD1 |
| HGNC: | 28310 |
| UniProt: | Q6JBY9 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@RCSD1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic stem cell | 2.99e-76 | 168 |
| hematopoietic cell | 1.31e-72 | 177 |
| hematopoietic oligopotent progenitor cell | 1.71e-70 | 161 |
| hematopoietic multipotent progenitor cell | 1.71e-70 | 161 |
| leukocyte | 1.38e-62 | 136 |
| nongranular leukocyte | 6.30e-57 | 115 |
| hematopoietic lineage restricted progenitor cell | 3.89e-53 | 120 |
| myeloid cell | 4.61e-36 | 108 |
| common myeloid progenitor | 4.61e-36 | 108 |
| lymphocyte | 2.49e-31 | 53 |
Showing 1 to 10 of 37 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 2.49e-30 | 98 |
| blood island | 2.49e-30 | 98 |
| hemolymphoid system | 7.45e-28 | 108 |
| immune system | 2.16e-21 | 93 |
| bone marrow | 1.36e-20 | 76 |
| bone element | 2.37e-17 | 82 |
| adult organism | 3.67e-17 | 114 |
| skeletal element | 8.00e-14 | 90 |
| skeletal system | 7.96e-11 | 100 |
| lateral plate mesoderm | 8.75e-10 | 203 |
Showing 1 to 10 of 14 entries
| Ontology term | p-value | n |
|---|---|---|
| hematologic cancer | 1.19e-18 | 51 |
| immune system cancer | 1.19e-18 | 51 |
| leukemia | 2.54e-17 | 39 |
| myeloid leukemia | 6.83e-13 | 31 |
Showing 1 to 4 of 4 entries
