FFCP PHASE2:Hg19::chr8:63161491..63161506,+: Difference between revisions
From FANTOM5_SSTAR
Jump to: navigation, search
(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:286183 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:26829 |TSScl...") |
No edit summary |
||
| Line 2: | Line 2: | ||
|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=286183 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=26829 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=Q8N8D7 | ||
|association_with_transcript=0bp_to_ENST00000523211,NM_173688,uc010lyq.1_5end | |association_with_transcript=0bp_to_ENST00000523211,NM_173688,uc010lyq.1_5end | ||
|cluster_id=chr8:63161491..63161506,+ | |cluster_id=chr8:63161491..63161506,+ | ||
Latest revision as of 18:16, 18 September 2015
| Short description: | p2@NKAIN3 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_2_at_NKAIN3_5end |
| Coexpression cluster: | C3_occipital_temporal_insula_medial_postcentral_frontal_amygdala |
| Association with transcript: | 0bp_to_ENST00000523211, NM_173688, uc010lyq.1_5end |
| EntrezGene: | NKAIN3 |
| HGNC: | 26829 |
| UniProt: | Q8N8D7 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p2@NKAIN3 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| astrocyte of the cerebral cortex | 2.35e-09 | 3 |
| oligodendrocyte | 9.81e-07 | 7 |
| macroglial cell | 9.81e-07 | 7 |
| astrocyte | 9.81e-07 | 7 |
| oligodendrocyte precursor cell | 9.81e-07 | 7 |
Showing 1 to 5 of 5 entries
| Ontology term | p-value | n |
|---|---|---|
| neural tube | 2.60e-115 | 56 |
| neural rod | 2.60e-115 | 56 |
| future spinal cord | 2.60e-115 | 56 |
| neural keel | 2.60e-115 | 56 |
| regional part of nervous system | 1.74e-106 | 53 |
| regional part of brain | 1.74e-106 | 53 |
| central nervous system | 2.12e-101 | 81 |
| telencephalon | 7.31e-96 | 34 |
| brain grey matter | 3.22e-95 | 34 |
| gray matter | 3.22e-95 | 34 |
Showing 1 to 10 of 94 entries
