FFCP PHASE2:Hg19::chr8:93031747..93031764,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:862 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:1535 |TSSclassi...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=862 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=1535 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=E5RG85 | ||
|association_with_transcript=-344bp_to_ENST00000521054_5end | |association_with_transcript=-344bp_to_ENST00000521054_5end | ||
|cluster_id=chr8:93031747..93031764,- | |cluster_id=chr8:93031747..93031764,- |
Latest revision as of 11:42, 19 September 2015
Short description: | p25@RUNX1T1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_25_at_RUNX1T1_5end |
Coexpression cluster: | C10_occipital_temporal_parietal_brain_duodenum_Neurons_Neural |
Association with transcript: | -344bp_to_ENST00000521054_5end |
EntrezGene: | RUNX1T1 |
HGNC: | 1535 |
UniProt: | E5RG85 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p25@RUNX1T1 |
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0.0
2.5
5.0
7.5
10.0
12.5
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neocortex | 6.80e-20 | 20 |
regional part of cerebral cortex | 3.55e-18 | 22 |
cerebral cortex | 4.29e-16 | 25 |
pallium | 4.29e-16 | 25 |
regional part of nervous system | 1.21e-14 | 53 |
regional part of brain | 1.21e-14 | 53 |
occipital lobe | 3.15e-14 | 5 |
neural tube | 7.44e-14 | 56 |
neural rod | 7.44e-14 | 56 |
future spinal cord | 7.44e-14 | 56 |
Showing 1 to 10 of 38 entries