FFCP PHASE2:Hg19::chr1:211307333..211307357,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=supported |DPIdataset=robust |EntrezGene=entrezgene:3756 |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding |HGNC=HGNC:6250 |TSSclass...") |
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|DHSsupport=supported | |DHSsupport=supported | ||
|DPIdataset=robust | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene=3756 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC= | |HGNC=6250 | ||
|TSSclassifier=strong | |TSSclassifier=strong | ||
|UniProt= | |UniProt=O95259 | ||
|association_with_transcript=-18bp_to_ENST00000271751_5end | |association_with_transcript=-18bp_to_ENST00000271751_5end | ||
|cluster_id=chr1:211307333..211307357,- | |cluster_id=chr1:211307333..211307357,- |
Latest revision as of 22:27, 24 September 2015
Short description: | p3@KCNH1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_KCNH1_5end |
Coexpression cluster: | C3936_anaplastic_nonsmall_occipital_postcentral_paracentral_frontal_insula |
Association with transcript: | -18bp_to_ENST00000271751_5end |
EntrezGene: | KCNH1 |
HGNC: | 6250 |
UniProt: | O95259 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p3@KCNH1 |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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melanocyte | 5.84e-07 | 10 |
melanoblast | 5.84e-07 | 10 |
Showing 1 to 2 of 2 entries
Ontology term | p-value | n |
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neocortex | 2.11e-44 | 20 |
regional part of cerebral cortex | 3.09e-40 | 22 |
telencephalon | 5.01e-37 | 34 |
cerebral cortex | 3.44e-35 | 25 |
pallium | 3.44e-35 | 25 |
cerebral hemisphere | 4.17e-35 | 32 |
regional part of nervous system | 7.33e-35 | 53 |
regional part of brain | 7.33e-35 | 53 |
neural tube | 9.59e-33 | 56 |
neural rod | 9.59e-33 | 56 |
Showing 1 to 10 of 49 entries