FFCP PHASE2:Mm9::chr3:7366589..7366594,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:18767 |HGNC= |MCL_coexpression_id=295 |TSSclassifier=NA |UniProt=uniprot:P63248,uniprot:Q3UTL0 |association_with_tr...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=18767 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=295 | |MCL_coexpression_id=295 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=P63248,Q3UTL0 | ||
|association_with_transcript=-9bp_to_ENSMUST00000028999,NM_008862,uc008oof.1_5end | |association_with_transcript=-9bp_to_ENSMUST00000028999,NM_008862,uc008oof.1_5end | ||
|cluster_id=chr3:7366589..7366594,+ | |cluster_id=chr3:7366589..7366594,+ | ||
Latest revision as of 16:46, 25 September 2015
| Short description: | p4@Pkia |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_4_at_Pkia_5end |
| Coexpression cluster: | MCL_coexpression_mm9:295 |
| Association with transcript: | -9bp_to_ENSMUST00000028999, NM_008862, uc008oof.1_5end |
| EntrezGene: | Pkia |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@Pkia |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| CNS neuron (sensu Vertebrata) | 1.01e-26 | 23 |
| neuroblast (sensu Vertebrata) | 1.01e-26 | 23 |
| neuron | 5.55e-17 | 33 |
| neuronal stem cell | 5.55e-17 | 33 |
| neuroblast | 5.55e-17 | 33 |
| electrically signaling cell | 5.55e-17 | 33 |
| electrically responsive cell | 1.47e-13 | 39 |
| electrically active cell | 1.47e-13 | 39 |
| neural cell | 8.12e-12 | 43 |
| ectodermal cell | 1.97e-11 | 44 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| regional part of nervous system | 4.88e-47 | 54 |
| neural tube | 2.34e-41 | 52 |
| neural rod | 2.34e-41 | 52 |
| future spinal cord | 2.34e-41 | 52 |
| neural keel | 2.34e-41 | 52 |
| gray matter | 8.45e-41 | 34 |
| central nervous system | 2.20e-40 | 73 |
| nervous system | 5.01e-39 | 75 |
| brain | 1.19e-38 | 47 |
| future brain | 1.19e-38 | 47 |
Showing 1 to 10 of 48 entries
