FFCP PHASE2:Mm9::chr1:136131559..136131578,-: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:11539 |HGNC= |MCL_coexpression_id=2 |TSSclassifier=NA |UniProt=uniprot:Q60612 |association_with_transcript=-404bp_t...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=11539 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=2 | |MCL_coexpression_id=2 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q60612 | ||
|association_with_transcript=-404bp_to_ENSMUST00000169927_5end | |association_with_transcript=-404bp_to_ENSMUST00000169927_5end | ||
|cluster_id=chr1:136131559..136131578,- | |cluster_id=chr1:136131559..136131578,- | ||
Latest revision as of 10:04, 26 September 2015
| Short description: | p5@Adora1 |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_5_at_Adora1_5end |
| Coexpression cluster: | MCL_coexpression_mm9:2 |
| Association with transcript: | -404bp_to_ENSMUST00000169927_5end |
| EntrezGene: | Adora1 |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p5@Adora1 |
|---|
0
5
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| oligodendrocyte precursor cell | 6.53e-11 | 8 |
| migratory neural crest cell | 1.38e-08 | 10 |
| neuron associated cell | 1.38e-08 | 10 |
| glial cell (sensu Vertebrata) | 1.38e-08 | 10 |
| neuron associated cell (sensu Vertebrata) | 1.38e-08 | 10 |
| glial cell | 1.38e-08 | 10 |
| glioblast | 1.38e-08 | 10 |
| glioblast (sensu Vertebrata) | 1.38e-08 | 10 |
| raphe nuclei neuron | 2.35e-07 | 3 |
| oligodendrocyte | 4.99e-07 | 6 |
Showing 1 to 10 of 12 entries
| Ontology term | p-value | n |
|---|---|---|
| central nervous system | 6.05e-27 | 73 |
| occipital lobe | 3.24e-26 | 10 |
| visual cortex | 3.24e-26 | 10 |
| neocortex | 3.24e-26 | 10 |
| regional part of nervous system | 3.71e-26 | 54 |
| nervous system | 4.76e-26 | 75 |
| regional part of cerebral cortex | 1.04e-24 | 17 |
| neural tube | 3.91e-23 | 52 |
| neural rod | 3.91e-23 | 52 |
| future spinal cord | 3.91e-23 | 52 |
Showing 1 to 10 of 38 entries
