FFCP PHASE2:Mm9::chr1:137043311..137043322,+: Difference between revisions
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(Created page with "{{FFCP |DHSsupport=NA |DPIdataset=NA |EntrezGene=entrezgene:68724 |HGNC= |MCL_coexpression_id=22 |TSSclassifier=NA |UniProt=uniprot:Q8VEH3 |association_with_transcript=-78bp_t...") |
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|DHSsupport=NA | |DHSsupport=NA | ||
|DPIdataset=NA | |DPIdataset=NA | ||
|EntrezGene= | |EntrezGene=68724 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=22 | |MCL_coexpression_id=22 | ||
|TSSclassifier=NA | |TSSclassifier=NA | ||
|UniProt= | |UniProt=Q8VEH3 | ||
|association_with_transcript=-78bp_to_ENSMUST00000027684_5end | |association_with_transcript=-78bp_to_ENSMUST00000027684_5end | ||
|cluster_id=chr1:137043311..137043322,+ | |cluster_id=chr1:137043311..137043322,+ | ||
Latest revision as of 10:31, 26 September 2015
| Short description: | p3@Arl8a |
|---|---|
| Species: | Mouse (Mus musculus) |
| DPI dataset: | NA |
| TSS-like-by-RIKEN-classifier(Yes/No): | NA |
| DHS support(Yes/No): | NA |
| Description: | CAGE_peak_3_at_Arl8a_5end |
| Coexpression cluster: | MCL_coexpression_mm9:22 |
| Association with transcript: | -78bp_to_ENSMUST00000027684_5end |
| EntrezGene: | Arl8a |
| Link to Zenbu: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p3@Arl8a |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| ectodermal cell | 1.65e-32 | 44 |
| neurectodermal cell | 1.65e-32 | 44 |
| neural cell | 1.11e-31 | 43 |
| CNS neuron (sensu Vertebrata) | 3.92e-27 | 23 |
| neuroblast (sensu Vertebrata) | 3.92e-27 | 23 |
| neuron | 4.14e-25 | 33 |
| neuronal stem cell | 4.14e-25 | 33 |
| neuroblast | 4.14e-25 | 33 |
| electrically signaling cell | 4.14e-25 | 33 |
| electrically responsive cell | 2.62e-21 | 39 |
Showing 1 to 10 of 22 entries
| Ontology term | p-value | n |
|---|---|---|
| nervous system | 1.10e-42 | 75 |
| central nervous system | 1.52e-40 | 73 |
| ectoderm-derived structure | 6.18e-36 | 95 |
| ectoderm | 6.18e-36 | 95 |
| presumptive ectoderm | 6.18e-36 | 95 |
| regional part of nervous system | 6.19e-33 | 54 |
| neural tube | 6.37e-31 | 52 |
| neural rod | 6.37e-31 | 52 |
| future spinal cord | 6.37e-31 | 52 |
| neural keel | 6.37e-31 | 52 |
Showing 1 to 10 of 55 entries
