UBERON:0001846
From FANTOM5_SSTAR
Name: | internal ear | ||
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Definition: | "Complex labyrinthine structure that comprises sensory endorgans specialized for vestibular, auditory, and acoustico-vestibular sensation." [PMID:16217737, Wikipedia:Internal_ear, ZFIN:curator] | ||
Xrefs: |
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Synonyms: |
"auris interna" RELATED [BTO:0000630] "inner ear" EXACT [] "labyrinth" RELATED [] "otocyst" RELATED [] | ||
Comments: | This class was created automatically from a combination of ontologies | ||
Alt_id: | UBERON:FMA_60909-MA_0000237-MIAA_0000145-XAO_0000192-ZFA_0000217 | ||
Subset: |
uberon_slim vertebrate_core |
Ontology association<br>Each term has an is_a parent in the Uberon Ontology, which has a linkage to an another entity and FANTOM5 samples.Libraries were grouped into mutually exclusive facets according to the FANTOM5 sample ontology mapping to UBERON ontologies.<br><br>link to ontology dataset<br>data
Parents
is_a: | UBERON:0000477(anatomical cluster),UBERON:0004121(ectoderm-derived structure),UBERON:0010314(structure with developmental contribution from neural crest) |
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Children
derives from: | FF:0000256 (Inner ear stem cell (1st generation stem cell) sample),FF:0000257 (Inner ear stem cells (4th generation stem cells) sample),FF:0000258 (Inner ear stem cell (10 days differentiation) sample),FF:0000259 (Inner ear stem cell (3 days differentiation) sample) |
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part of: | FF:0000256 (Inner ear stem cell (1st generation stem cell) sample),FF:0000257 (Inner ear stem cells (4th generation stem cells) sample),FF:0000258 (Inner ear stem cell (10 days differentiation) sample),FF:0000259 (Inner ear stem cell (3 days differentiation) sample),UBERON:0001839 (bony labyrinth),UBERON:0001849 (membranous labyrinth),UBERON:0004637 (otic capsule),UBERON:0010113 (future membranous labyrinth),UBERON:0010349 (otic capsule pre-cartilage condensation),UBERON:0010351 (otic capsule cartilage condensation) |
Ontology Tree: Loaded from BioPortal
Ontorolgy tree(Small window open)
FF samples<br>It includes FANTOM5 samples that overlay the Uberon ontology
Mouse (Mus musculus)
- 12157-128G6 (Sox2+ Supporting cells - organ of corti, pool1)
- 12158-128G7 (Atoh+ Inner ear hair cells - organ of corti, pool1)
- 12215-129E1 (Inner ear stem cells, 1st generation stem cells, pool1)
- 12216-129E2 (Inner ear stem cells, 4th generation stem cells, pool1)
- 12217-129E3 (Inner ear stem cells, differentiation, day03, pool1)
- 12218-129E4 (Inner ear stem cells, differentiation, day10, pool1)
Enrichment analysis: top 100 FFCP enriched with this ontology term TOP 100 FANTOM5 Cage Peaks enriched with UBERON:0001846 (internal ear), sorted by p-values <br>Analyst: Hideya Kawaji<br><br>link to source dataset <br>human : data <br>mouse : data
P-value | FFCP | Short description |
---|---|---|
1.87e-86 | FFCP PHASE2:Mm9::chr8:125802236..125802251,-#_290235bc8c76f63330a2b730572b2dad | p3@Fanca |
1.87e-86 | FFCP PHASE2:Mm9::chr3:35012397..35012405,+#_290235bc8c76f63330a2b730572b2dad | p@chr3:35012397..35012405, + |
1.87e-86 | FFCP PHASE2:Mm9::chr4:115556972..115556979,+#_290235bc8c76f63330a2b730572b2dad | p3@Kncn |
1.87e-86 | FFCP PHASE2:Mm9::chr17:13983102..13983126,+#_290235bc8c76f63330a2b730572b2dad | p@chr17:13983102..13983126, + |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42207852..42207876,-#_290235bc8c76f63330a2b730572b2dad | p2@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr7:29733825..29733837,-#_290235bc8c76f63330a2b730572b2dad | p@chr7:29733825..29733837, - |
1.87e-86 | FFCP PHASE1:Mm9::chr1:93235228..93235249,+#_290235bc8c76f63330a2b730572b2dad | p@chr1:93235228..93235249, + |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42206730..42206739,-#_290235bc8c76f63330a2b730572b2dad | p@chr9:42206730..42206739, - |
1.87e-86 | FFCP PHASE1:Mm9::chr15:85334335..85334353,+#_290235bc8c76f63330a2b730572b2dad | p@chr15:85334335..85334353, + |
1.87e-86 | FFCP PHASE2:Mm9::chr3:69811606..69811616,+#_290235bc8c76f63330a2b730572b2dad | p2@Otol1 |
1.87e-86 | FFCP PHASE1:Mm9::chr5:28035962..28035983,+#_290235bc8c76f63330a2b730572b2dad | p@chr5:28035962..28035983, + |
1.87e-86 | FFCP PHASE1:Mm9::chr4:101908153..101908163,+#_290235bc8c76f63330a2b730572b2dad | p@chr4:101908153..101908163, + |
1.87e-86 | FFCP PHASE2:Mm9::chr18:81327205..81327211,+#_290235bc8c76f63330a2b730572b2dad | p@chr18:81327205..81327211, + |
1.87e-86 | FFCP PHASE2:Mm9::chr11:11599532..11599539,-#_290235bc8c76f63330a2b730572b2dad | p@chr11:11599532..11599539, - |
1.87e-86 | FFCP PHASE2:Mm9::chr12:77084875..77084885,+#_290235bc8c76f63330a2b730572b2dad | p@chr12:77084875..77084885, + |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42206730..42206739,-#_290235bc8c76f63330a2b730572b2dad | p@chr9:42206730..42206739, - |
1.87e-86 | FFCP PHASE1:Mm9::chr1:63733478..63733491,-#_290235bc8c76f63330a2b730572b2dad | p1@Dytn |
1.87e-86 | FFCP PHASE2:Mm9::chr1:93218682..93218691,+#_290235bc8c76f63330a2b730572b2dad | p2@Espnl |
1.87e-86 | FFCP PHASE2:Mm9::chr11:4689776..4689785,-#_290235bc8c76f63330a2b730572b2dad | p@chr11:4689776..4689785, - |
1.87e-86 | FFCP PHASE2:Mm9::chr4:154208086..154208123,+#_290235bc8c76f63330a2b730572b2dad | p@chr4:154208086..154208123, + |
1.87e-86 | FFCP PHASE2:Mm9::chr15:85334335..85334353,+#_290235bc8c76f63330a2b730572b2dad | p@chr15:85334335..85334353, + |
1.87e-86 | FFCP PHASE2:Mm9::chr6:113251614..113251623,+#_290235bc8c76f63330a2b730572b2dad | p@chr6:113251614..113251623, + |
1.87e-86 | FFCP PHASE2:Mm9::chr13:78257454..78257465,+#_290235bc8c76f63330a2b730572b2dad | p@chr13:78257454..78257465, + |
1.87e-86 | FFCP PHASE2:Mm9::chr13:48087761..48087775,-#_290235bc8c76f63330a2b730572b2dad | p@chr13:48087761..48087775, - |
1.87e-86 | FFCP PHASE1:Mm9::chr7:109052262..109052291,-#_290235bc8c76f63330a2b730572b2dad | p1@Tomt |
1.87e-86 | FFCP PHASE1:Mm9::chr2:152453066..152453075,-#_290235bc8c76f63330a2b730572b2dad | p@chr2:152453066..152453075, - |
1.87e-86 | FFCP PHASE2:Mm9::chr1:63733478..63733491,-#_290235bc8c76f63330a2b730572b2dad | p1@Dytn |
1.87e-86 | FFCP PHASE1:Mm9::chrX:154140781..154140788,+#_290235bc8c76f63330a2b730572b2dad | p@chrX:154140781..154140788, + |
1.87e-86 | FFCP PHASE1:Mm9::chr3:69811606..69811616,+#_290235bc8c76f63330a2b730572b2dad | p2@Otol1 |
1.87e-86 | FFCP PHASE1:Mm9::chr2:29935952..29935993,+#_290235bc8c76f63330a2b730572b2dad | p7@Pkn3 |
1.87e-86 | FFCP PHASE2:Mm9::chr18:38104702..38104718,-#_290235bc8c76f63330a2b730572b2dad | p@chr18:38104702..38104718, - |
1.87e-86 | FFCP PHASE1:Mm9::chr3:106986057..106986062,+#_290235bc8c76f63330a2b730572b2dad | p1@Kcna10 |
1.87e-86 | FFCP PHASE2:Mm9::chr3:154459246..154459253,+#_290235bc8c76f63330a2b730572b2dad | p@chr3:154459246..154459253, + |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42208023..42208043,-#_290235bc8c76f63330a2b730572b2dad | p4@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr6:86746562..86746579,-#_290235bc8c76f63330a2b730572b2dad | p@chr6:86746562..86746579, - |
1.87e-86 | FFCP PHASE2:Mm9::chrX:154140800..154140810,+#_290235bc8c76f63330a2b730572b2dad | p@chrX:154140800..154140810, + |
1.87e-86 | FFCP PHASE1:Mm9::chr1:172843885..172843890,-#_290235bc8c76f63330a2b730572b2dad | p@chr1:172843885..172843890, - |
1.87e-86 | FFCP PHASE2:Mm9::chr18:59222033..59222043,+#_290235bc8c76f63330a2b730572b2dad | p7@A730017C20Rik |
1.87e-86 | FFCP PHASE2:Mm9::chr1:43454162..43454170,-#_290235bc8c76f63330a2b730572b2dad | p@chr1:43454162..43454170, - |
1.87e-86 | FFCP PHASE2:Mm9::chr10:107349418..107349423,-#_290235bc8c76f63330a2b730572b2dad | p5@Otogl |
1.87e-86 | FFCP PHASE2:Mm9::chr17:31335869..31335899,-#_290235bc8c76f63330a2b730572b2dad | p1@Tmprss3 |
1.87e-86 | FFCP PHASE2:Mm9::chr14:47293487..47293493,-#_290235bc8c76f63330a2b730572b2dad | p@chr14:47293487..47293493, - |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42208023..42208043,-#_290235bc8c76f63330a2b730572b2dad | p4@Tecta |
1.87e-86 | FFCP PHASE2:Mm9::chr6:86745686..86745727,-#_290235bc8c76f63330a2b730572b2dad | p@chr6:86745686..86745727, - |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42207697..42207705,-#_290235bc8c76f63330a2b730572b2dad | p@chr9:42207697..42207705, - |
1.87e-86 | FFCP PHASE1:Mm9::chr2:121206695..121206711,-#_290235bc8c76f63330a2b730572b2dad | p1@Strc |
1.87e-86 | FFCP PHASE1:Mm9::chr11:114603036..114603048,+#_290235bc8c76f63330a2b730572b2dad | p@chr11:114603036..114603048, + |
1.87e-86 | FFCP PHASE1:Mm9::chr7:109265277..109265288,-#_290235bc8c76f63330a2b730572b2dad | p4@Chrna10 |
1.87e-86 | FFCP PHASE1:Mm9::chr11:4689837..4689845,-#_290235bc8c76f63330a2b730572b2dad | p@chr11:4689837..4689845, - |
1.87e-86 | FFCP PHASE2:Mm9::chr7:88068153..88068160,-#_290235bc8c76f63330a2b730572b2dad | p10@Sec11a |
1.87e-86 | FFCP PHASE1:Mm9::chr5:3909290..3909299,+#_290235bc8c76f63330a2b730572b2dad | p@chr5:3909290..3909299, + |
1.87e-86 | FFCP PHASE1:Mm9::chr4:115556939..115556945,+#_290235bc8c76f63330a2b730572b2dad | p4@Kncn |
1.87e-86 | FFCP PHASE2:Mm9::chr1:194818647..194818660,-#_290235bc8c76f63330a2b730572b2dad | p@chr1:194818647..194818660, - |
1.87e-86 | FFCP PHASE2:Mm9::chr5:68423014..68423037,+#_290235bc8c76f63330a2b730572b2dad | p1@Grxcr1 |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42207697..42207705,-#_290235bc8c76f63330a2b730572b2dad | p@chr9:42207697..42207705, - |
1.87e-86 | FFCP PHASE1:Mm9::chr7:27964761..27964768,+#_290235bc8c76f63330a2b730572b2dad | p@chr7:27964761..27964768, + |
1.87e-86 | FFCP PHASE2:Mm9::chr9:50968647..50968668,-#_290235bc8c76f63330a2b730572b2dad | p@chr9:50968647..50968668, - |
1.87e-86 | FFCP PHASE1:Mm9::chr3:154693281..154693317,-#_290235bc8c76f63330a2b730572b2dad | p@chr3:154693281..154693317, - |
1.87e-86 | FFCP PHASE1:Mm9::chr5:150945209..150945220,+#_290235bc8c76f63330a2b730572b2dad | p@chr5:150945209..150945220, + |
1.87e-86 | FFCP PHASE1:Mm9::chr9:41495920..41495928,-#_290235bc8c76f63330a2b730572b2dad | p@chr9:41495920..41495928, - |
1.87e-86 | FFCP PHASE1:Mm9::chr2:53464178..53464186,+#_290235bc8c76f63330a2b730572b2dad | p@chr2:53464178..53464186, + |
1.87e-86 | FFCP PHASE1:Mm9::chr12:13572961..13572974,+#_290235bc8c76f63330a2b730572b2dad | p@chr12:13572961..13572974, + |
1.87e-86 | FFCP PHASE2:Mm9::chr10:80806047..80806059,-#_290235bc8c76f63330a2b730572b2dad | p4@Gipc3 |
1.87e-86 | FFCP PHASE1:Mm9::chr4:151505798..151505818,-#_290235bc8c76f63330a2b730572b2dad | p21@Espn |
1.87e-86 | FFCP PHASE2:Mm9::chr9:92087926..92087938,+#_290235bc8c76f63330a2b730572b2dad | p2@Plscr5 |
1.87e-86 | FFCP PHASE2:Mm9::chr3:58626291..58626298,-#_290235bc8c76f63330a2b730572b2dad | p@chr3:58626291..58626298, - |
1.87e-86 | FFCP PHASE1:Mm9::chr9:56208792..56208814,-#_290235bc8c76f63330a2b730572b2dad | p@chr9:56208792..56208814, - |
1.87e-86 | FFCP PHASE1:Mm9::chr15:58480061..58480066,+#_290235bc8c76f63330a2b730572b2dad | p5@Fer1l6 |
1.87e-86 | FFCP PHASE2:Mm9::chr5:3909290..3909299,+#_290235bc8c76f63330a2b730572b2dad | p@chr5:3909290..3909299, + |
1.87e-86 | FFCP PHASE1:Mm9::chr10:107349378..107349390,-#_290235bc8c76f63330a2b730572b2dad | p1@Otogl |
1.87e-86 | FFCP PHASE2:Mm9::chr1:172843813..172843834,-#_290235bc8c76f63330a2b730572b2dad | p@chr1:172843813..172843834, - |
1.87e-86 | FFCP PHASE1:Mm9::chr1:182528371..182528385,+#_290235bc8c76f63330a2b730572b2dad | p@chr1:182528371..182528385, + |
1.87e-86 | FFCP PHASE1:Mm9::chr14:31283085..31283097,-#_290235bc8c76f63330a2b730572b2dad | p@chr14:31283085..31283097, - |
1.87e-86 | FFCP PHASE1:Mm9::chr11:94371127..94371139,-#_290235bc8c76f63330a2b730572b2dad | p@chr11:94371127..94371139, - |
1.87e-86 | FFCP PHASE2:Mm9::chr4:130461150..130461185,+#_290235bc8c76f63330a2b730572b2dad | p@chr4:130461150..130461185, + |
1.87e-86 | FFCP PHASE1:Mm9::chr6:113251614..113251623,+#_290235bc8c76f63330a2b730572b2dad | p@chr6:113251614..113251623, + |
1.87e-86 | FFCP PHASE1:Mm9::chr19:10536767..10536777,-#_290235bc8c76f63330a2b730572b2dad | p@chr19:10536767..10536777, - |
1.87e-86 | FFCP PHASE1:Mm9::chr17:13983102..13983126,+#_290235bc8c76f63330a2b730572b2dad | p@chr17:13983102..13983126, + |
1.87e-86 | FFCP PHASE2:Mm9::chr3:100724698..100724706,+#_290235bc8c76f63330a2b730572b2dad | p@chr3:100724698..100724706, + |
1.87e-86 | FFCP PHASE2:Mm9::chr6:30619378..30619412,-#_290235bc8c76f63330a2b730572b2dad | p11@Tsga14 |
1.87e-86 | FFCP PHASE1:Mm9::chr15:103146966..103146971,-#_290235bc8c76f63330a2b730572b2dad | p@chr15:103146966..103146971, - |
1.87e-86 | FFCP PHASE2:Mm9::chr19:10536797..10536802,-#_290235bc8c76f63330a2b730572b2dad | p@chr19:10536797..10536802, - |
1.87e-86 | FFCP PHASE2:Mm9::chr9:56208792..56208814,-#_290235bc8c76f63330a2b730572b2dad | p@chr9:56208792..56208814, - |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42207887..42207960,-#_290235bc8c76f63330a2b730572b2dad | p1@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr19:55256373..55256384,+#_290235bc8c76f63330a2b730572b2dad | p@chr19:55256373..55256384, + |
1.87e-86 | FFCP PHASE1:Mm9::chr13:78322370..78322376,-#_290235bc8c76f63330a2b730572b2dad | p4@uc007rhb.1 |
1.87e-86 | FFCP PHASE2:Mm9::chr11:102123535..102123544,+#_290235bc8c76f63330a2b730572b2dad | p5@BC030867 |
1.87e-86 | FFCP PHASE1:Mm9::chr16:93971325..93971337,-#_290235bc8c76f63330a2b730572b2dad | p@chr16:93971325..93971337, - |
1.87e-86 | FFCP PHASE2:Mm9::chr3:35012425..35012439,+#_290235bc8c76f63330a2b730572b2dad | p@chr3:35012425..35012439, + |
1.87e-86 | FFCP PHASE2:Mm9::chr4:115556989..115556997,+#_290235bc8c76f63330a2b730572b2dad | p1@Kncn |
1.87e-86 | FFCP PHASE2:Mm9::chr17:13983160..13983167,+#_290235bc8c76f63330a2b730572b2dad | p@chr17:13983160..13983167, + |
1.87e-86 | FFCP PHASE1:Mm9::chr9:42207887..42207960,-#_290235bc8c76f63330a2b730572b2dad | p1@Tecta |
1.87e-86 | FFCP PHASE1:Mm9::chr1:93235253..93235264,+#_290235bc8c76f63330a2b730572b2dad | p@chr1:93235253..93235264, + |
1.87e-86 | FFCP PHASE2:Mm9::chr9:42206745..42206774,-#_290235bc8c76f63330a2b730572b2dad | p@chr9:42206745..42206774, - |
1.87e-86 | FFCP PHASE2:Mm9::chr19:55255206..55255223,+#_290235bc8c76f63330a2b730572b2dad | p1@Tectb |
1.87e-86 | FFCP PHASE1:Mm9::chr11:102123535..102123544,+#_290235bc8c76f63330a2b730572b2dad | p5@BC030867 |
1.87e-86 | FFCP PHASE2:Mm9::chr3:106986057..106986062,+#_290235bc8c76f63330a2b730572b2dad | p1@Kcna10 |
1.87e-86 | FFCP PHASE1:Mm9::chr3:35012397..35012405,+#_290235bc8c76f63330a2b730572b2dad | p@chr3:35012397..35012405, + |
1.87e-86 | FFCP PHASE1:Mm9::chr15:89215306..89215315,+#_290235bc8c76f63330a2b730572b2dad | p@chr15:89215306..89215315, + |
1.87e-86 | FFCP PHASE2:Mm9::chr2:128881546..128881553,-#_290235bc8c76f63330a2b730572b2dad | p@chr2:128881546..128881553, - |
Property "Property value" (as page type) with input value "UBPROP:0000001 "The auditory (hearing) and vestibular (balance) organ of the fish, equivalent to the inner ear of amniotes. (See Anatomical Atlas entry for ear by T. Whitfield.)[TAO]" xsd:string" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.