FFCP PHASE1:Hg19::chr2:238322913..238322923,-
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Short description: | p12@COL6A3 |
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Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_12_at_COL6A3_5end |
Coexpression cluster: | C332_Fibroblast_Smooth_Mesenchymal_mesenchymal_Chondrocyte_Skeletal_Pericytes |
Association with transcript: | -63bp_to_ENST00000346358, ENST00000347401, ENST00000353578, ENST00000392003, NM_004369, NM_057164, NM_057165, NM_057166, NM_057167, uc002vwl.2, uc002vwo.2, uc002vwq.2, uc002vwr.2, uc010znj.1, uc010znk.1_5end |
EntrezGene: | COL6A3 |
HGNC: | 2213 |
UniProt: | E9PCV6E7ENL6A8MT30D9ZGF2P12111Q63HQ4Q8N4Z1B4E3U5E9PGQ9B7ZMJ7B7ZW00E9PFQ6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
Sample | p12@COL6A3 |
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0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.63e-18 | 76 |
skin fibroblast | 6.55e-16 | 23 |
multi fate stem cell | 1.57e-10 | 427 |
somatic stem cell | 3.94e-10 | 433 |
stem cell | 1.29e-09 | 441 |
cardiac mesenchymal cell | 2.00e-09 | 4 |
migratory trunk neural crest cell | 2.00e-09 | 4 |
mesenchymal stem cell of the bone marrow | 2.53e-09 | 6 |
connective tissue cell | 3.14e-09 | 361 |
cell of skeletal muscle | 3.48e-08 | 9 |
Showing 1 to 10 of 11 entries
Ontology term | p-value | n |
---|---|---|
integument | 8.52e-11 | 46 |
integumental system | 8.52e-11 | 46 |
skin of body | 6.32e-10 | 41 |
connective tissue | 1.23e-09 | 371 |
surface structure | 5.60e-07 | 99 |
Showing 1 to 5 of 5 entries
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 2.40e-11 | 5 |
myotonic disease | 2.40e-11 | 5 |
muscle tissue disease | 2.40e-11 | 5 |
myopathy | 2.40e-11 | 5 |
muscular disease | 2.40e-11 | 5 |
myotonic dystrophy | 2.40e-11 | 5 |
Showing 1 to 6 of 6 entries
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