FFCP PHASE1:Hg19::chr17:2278539..2278556,+
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p6@SGSM2 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_6_at_SGSM2_5end |
| Coexpression cluster: | C323_Placental_Amniotic_neuroblastoma_amniotic_chorionic_hairy_locus |
| Association with transcript: | -229bp_to_uc002fup.1_5end |
| EntrezGene: | SGSM2 |
| HGNC: | 29026 |
| UniProt: | O43147 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p6@SGSM2 |
|---|
0
2
4
6
8
10
12
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| extraembryonic cell | 1.62e-49 | 19 |
| placental epithelial cell | 3.79e-36 | 3 |
| melanocyte | 1.27e-28 | 10 |
| melanoblast | 1.27e-28 | 10 |
| amniotic epithelial cell | 3.44e-25 | 2 |
| pigment cell | 1.81e-20 | 14 |
| chorionic membrane mesenchymal stem cell | 1.08e-16 | 3 |
| light melanocyte | 2.38e-16 | 3 |
| neurecto-epithelial cell | 2.47e-14 | 20 |
| dark melanocyte | 1.09e-12 | 1 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| extraembryonic membrane | 1.72e-67 | 14 |
| membranous layer | 1.72e-67 | 14 |
| chorion | 4.57e-42 | 7 |
| extraembryonic structure | 5.06e-39 | 24 |
| amnion | 9.80e-28 | 7 |
| placenta | 2.64e-27 | 4 |
| allantois | 2.64e-27 | 4 |
| somatic layer of lateral plate mesoderm | 2.57e-24 | 8 |
| egg chorion | 1.08e-16 | 3 |
| organ component layer | 1.48e-13 | 66 |
Showing 1 to 10 of 17 entries
