FFCP PHASE1:Hg19::chr19:3574157..3574180,+
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| Short description: | p4@HMG20B |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_HMG20B_5end |
| Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
| Association with transcript: | -110bp_to_ENST00000486028_5end |
| EntrezGene: | HMG20B |
| HGNC: | 5002 |
| UniProt: | NA |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p4@HMG20B |
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| melanocyte | 1.35e-40 | 10 |
| melanoblast | 1.35e-40 | 10 |
| pigment cell | 1.12e-28 | 14 |
| Langerhans cell | 1.05e-20 | 5 |
| light melanocyte | 1.11e-20 | 3 |
| neurecto-epithelial cell | 9.98e-20 | 20 |
| columnar/cuboidal epithelial cell | 2.64e-14 | 27 |
| conventional dendritic cell | 1.40e-11 | 8 |
| ecto-epithelial cell | 4.11e-11 | 34 |
| dendritic cell | 1.70e-09 | 10 |
Showing 1 to 10 of 13 entries
| Ontology term | p-value | n |
|---|---|---|
| larynx | 1.46e-54 | 9 |
| upper respiratory tract | 3.95e-25 | 19 |
| respiratory primordium | 1.14e-14 | 38 |
| endoderm of foregut | 1.14e-14 | 38 |
| segment of respiratory tract | 1.56e-11 | 47 |
| respiratory tract | 8.12e-10 | 54 |
Showing 1 to 6 of 6 entries
| Ontology term | p-value | n |
|---|---|---|
| melanoma | 1.54e-13 | 2 |
| carcinoma | 2.22e-07 | 106 |
| thoracic cancer | 3.28e-07 | 4 |
| breast cancer | 3.28e-07 | 4 |
| cell type cancer | 8.89e-07 | 143 |
Showing 1 to 5 of 5 entries
