FFCP PHASE2:Hg19::chr11:27723079..27723100,-
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p4@BDNF |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_BDNF_5end |
| Coexpression cluster: | C1629_hepatic_spindle_Fibroblast_Smooth_liposarcoma_papillary_Ciliary |
| Association with transcript: | 79bp_to_ENST00000395980, NM_170733, uc001mrv.2_5end |
| EntrezGene: | BDNF |
| HGNC: | 1033 |
| UniProt: | P23560 |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@BDNF |
|---|
0
5
10
15
20
25
30
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| vascular associated smooth muscle cell | 2.50e-19 | 32 |
| smooth muscle cell | 4.08e-19 | 43 |
| smooth muscle myoblast | 4.08e-19 | 43 |
| fibroblast | 9.25e-14 | 76 |
| muscle cell | 3.36e-13 | 55 |
| muscle precursor cell | 4.03e-13 | 58 |
| myoblast | 4.03e-13 | 58 |
| multi-potent skeletal muscle stem cell | 4.03e-13 | 58 |
| skin fibroblast | 1.49e-12 | 23 |
| electrically responsive cell | 3.71e-11 | 61 |
Showing 1 to 10 of 16 entries
| Ontology term | p-value | n |
|---|---|---|
| artery | 2.96e-14 | 42 |
| arterial blood vessel | 2.96e-14 | 42 |
| arterial system | 2.96e-14 | 42 |
| systemic artery | 5.87e-13 | 33 |
| systemic arterial system | 5.87e-13 | 33 |
| dense mesenchyme tissue | 1.61e-12 | 73 |
| somite | 4.66e-12 | 71 |
| presomitic mesoderm | 4.66e-12 | 71 |
| presumptive segmental plate | 4.66e-12 | 71 |
| dermomyotome | 4.66e-12 | 71 |
Showing 1 to 10 of 38 entries
| Ontology term | p-value | n |
|---|---|---|
| musculoskeletal system disease | 1.26e-07 | 5 |
| myotonic disease | 1.26e-07 | 5 |
| muscle tissue disease | 1.26e-07 | 5 |
| myopathy | 1.26e-07 | 5 |
| muscular disease | 1.26e-07 | 5 |
| myotonic dystrophy | 1.26e-07 | 5 |
Showing 1 to 6 of 6 entries
