FFCP PHASE2:Hg19::chr21:47421929..47421942,+
From FANTOM5_SSTAR
Jump to: navigation, search
| Short description: | p19@COL6A1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_19_at_COL6A1_5end |
| Coexpression cluster: | C198_Mesenchymal_Hair_Hepatic_Fibroblast_Smooth_tenocyte_Pericytes |
| Association with transcript: | -460bp_to_ENST00000486023, uc002zhw.1_5end |
| EntrezGene: | COL6A1 |
| HGNC: | 2211 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p19@COL6A1 |
|---|
0.0
2.5
5.0
7.5
10.0
12.5
15.0
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| mesenchymal stem cell of adipose | 4.38e-22 | 8 |
| fibroblast | 2.90e-16 | 76 |
| connective tissue cell | 8.72e-14 | 361 |
| stromal cell | 2.65e-12 | 28 |
| multi fate stem cell | 2.89e-12 | 427 |
| somatic stem cell | 6.73e-12 | 433 |
| stem cell | 2.00e-11 | 441 |
| mesenchymal cell | 2.05e-10 | 354 |
| fibrocyte | 5.57e-10 | 3 |
| tendon cell | 5.57e-10 | 3 |
Showing 1 to 10 of 19 entries
| Ontology term | p-value | n |
|---|---|---|
| adipose tissue | 3.95e-23 | 14 |
| hypodermis | 3.17e-15 | 5 |
| connective tissue | 8.09e-14 | 371 |
| dense regular connective tissue | 5.57e-10 | 3 |
| tendon | 5.57e-10 | 3 |
| regular connective tissue | 5.57e-10 | 3 |
| subcutaneous adipose tissue | 9.52e-10 | 3 |
| vascular plexus | 3.77e-07 | 2 |
| ventricle of nervous system | 3.77e-07 | 2 |
| choroid plexus | 3.77e-07 | 2 |
Showing 1 to 10 of 16 entries
