FFCP PHASE2:Hg19::chr7:155601826..155601846,-
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| Short description: | p3@SHH |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_3_at_SHH_5end |
| Coexpression cluster: | C5_Hepatocyte_liver_hepatocellular_Intestinal_kidney_small_pancreas |
| Association with transcript: | -60bp_to_ENST00000430104, ENST00000435425, ENST00000441114, uc003wmh.1, uc003wmi.1, uc003wmj.1_5end |
| EntrezGene: | SHH |
| HGNC: | 10848 |
| UniProt: | C9JC48F8WEH4F8WB84 |
| Genome view: | ZENBU |
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CAGE Expression
| Sample | p3@SHH |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| hepatocyte | 2.41e-32 | 12 |
| endodermal cell | 6.82e-15 | 58 |
| serous secreting cell | 1.99e-09 | 1 |
Showing 1 to 3 of 3 entries
| Ontology term | p-value | n |
|---|---|---|
| epithelium of foregut-midgut junction | 4.05e-37 | 25 |
| anatomical boundary | 4.05e-37 | 25 |
| hepatobiliary system | 4.05e-37 | 25 |
| foregut-midgut junction | 4.05e-37 | 25 |
| septum transversum | 4.05e-37 | 25 |
| hepatic diverticulum | 3.40e-35 | 22 |
| liver primordium | 3.40e-35 | 22 |
| digestive tract diverticulum | 1.34e-33 | 23 |
| liver | 2.28e-33 | 19 |
| digestive gland | 2.28e-33 | 19 |
Showing 1 to 10 of 47 entries
| Ontology term | p-value | n |
|---|---|---|
| ovary epithelial cancer | 1.99e-09 | 1 |
| adenocarcinoma | 8.26e-08 | 25 |
| carcinoma | 3.48e-07 | 106 |
Showing 1 to 3 of 3 entries
