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MCL coexpression mm9:70

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Phase1 CAGE Peaks

 Short description
Mm9::chr10:19868263..19868284,+p8@Mtap7
Mm9::chr10:6486766..6486804,-p@chr10:6486766..6486804
-
Mm9::chr10:6486850..6486860,-p@chr10:6486850..6486860
-
Mm9::chr10:80809447..80809515,-p5@Hmg20b
Mm9::chr10:86371461..86371471,+p2@ENSMUST00000162458
Mm9::chr11:107180560..107180583,-p@chr11:107180560..107180583
-
Mm9::chr11:116586509..116586516,-p@chr11:116586509..116586516
-
Mm9::chr11:120764932..120764940,-p@chr11:120764932..120764940
-
Mm9::chr11:3892492..3892527,+p@chr11:3892492..3892527
+
Mm9::chr11:58775267..58775282,+p1@ENSMUST00000122447
Mm9::chr11:58775412..58775435,+p2@ENSMUST00000122447
Mm9::chr11:61156296..61156305,-p2@Slc47a2
Mm9::chr11:61156311..61156316,-p3@Slc47a2
Mm9::chr11:61156323..61156370,-p1@Slc47a2
Mm9::chr11:69430476..69430487,-p4@Shbg
Mm9::chr11:87218551..87218615,+p1@Tex14
Mm9::chr12:113957448..113957467,+p@chr12:113957448..113957467
+
Mm9::chr12:74018837..74018852,-p2@4930447C04Rik
Mm9::chr12:77084678..77084683,+p@chr12:77084678..77084683
+
Mm9::chr13:112477972..112477982,+p@chr13:112477972..112477982
+
Mm9::chr13:12292672..12292684,-p6@Mtr
Mm9::chr13:23585688..23585699,+p@chr13:23585688..23585699
+
Mm9::chr13:24026303..24026308,+p1@Hist1h2aa
Mm9::chr13:58377008..58377012,-p@chr13:58377008..58377012
-
Mm9::chr14:24655068..24655077,-p@chr14:24655068..24655077
-
Mm9::chr14:55432981..55432993,+p@chr14:55432981..55432993
+
Mm9::chr14:57021542..57021549,+p@chr14:57021542..57021549
+
Mm9::chr14:70829178..70829221,-p1@Piwil2
Mm9::chr15:102275818..102275834,+p1@Amhr2
Mm9::chr15:102277099..102277126,+p@chr15:102277099..102277126
+
Mm9::chr15:35984869..35984883,-p@chr15:35984869..35984883
-
Mm9::chr15:64402726..64402730,-p@chr15:64402726..64402730
-
Mm9::chr15:79435516..79435544,-p1@Dmc1
Mm9::chr15:81602763..81602776,+p@chr15:81602763..81602776
+
Mm9::chr15:91029884..91029893,+p@chr15:91029884..91029893
+
Mm9::chr15:99463233..99463245,-p2@Racgap1
Mm9::chr16:33179212..33179229,+p@chr16:33179212..33179229
+
Mm9::chr17:13102778..13102820,-p1@Pnldc1
Mm9::chr17:26158861..26158880,-p6@Rab11fip3
Mm9::chr17:26158886..26158904,-p8@Rab11fip3
Mm9::chr17:43705239..43705252,+p10@Pla2g7
Mm9::chr17:49649179..49649202,-p@chr17:49649179..49649202
-
Mm9::chr17:49649205..49649222,-p@chr17:49649205..49649222
-
Mm9::chr17:49649263..49649268,-p@chr17:49649263..49649268
-
Mm9::chr17:49668428..49668449,-p@chr17:49668428..49668449
-
Mm9::chr17:49689353..49689360,-p@chr17:49689353..49689360
-
Mm9::chr17:49689426..49689442,-p@chr17:49689426..49689442
-
Mm9::chr17:50432917..50432931,-p1@Dazl
Mm9::chr17:68663935..68663949,+p3@L3mbtl4
Mm9::chr17:84256276..84256289,+p@chr17:84256276..84256289
+
Mm9::chr18:14887856..14887867,-p@chr18:14887856..14887867
-
Mm9::chr18:31858304..31858313,+p@chr18:31858304..31858313
+
Mm9::chr18:35395153..35395171,+p@chr18:35395153..35395171
+
Mm9::chr18:74029632..74029644,+p@chr18:74029632..74029644
+
Mm9::chr19:10166685..10166694,-p@chr19:10166685..10166694
-
Mm9::chr19:10166695..10166707,-p@chr19:10166695..10166707
-
Mm9::chr19:20566755..20566762,+p9@E030003E18Rik
Mm9::chr19:24217365..24217376,-p@chr19:24217365..24217376
-
Mm9::chr19:24217397..24217404,-p@chr19:24217397..24217404
-
Mm9::chr19:25580353..25580364,+p4@Dmrt1
Mm9::chr19:40968642..40968653,+p@chr19:40968642..40968653
+
Mm9::chr1:13216009..13216028,-p@chr1:13216009..13216028
-
Mm9::chr1:13216038..13216051,-p@chr1:13216038..13216051
-
Mm9::chr2:104967357..104967379,+p9@Wt1
Mm9::chr2:104971121..104971138,+p14@Wt1
Mm9::chr2:119838899..119838947,+p@chr2:119838899..119838947
+
Mm9::chr2:148660930..148660931,+p4@Cst9
Mm9::chr2:148660933..148660963,+p2@Cst9
Mm9::chr2:151470928..151470931,-p@chr2:151470928..151470931
-
Mm9::chr2:151496314..151496349,-p@chr2:151496314..151496349
-
Mm9::chr2:152430060..152430086,+p3@Defb36
Mm9::chr2:152430094..152430135,+p1@Defb36
Mm9::chr2:152430137..152430146,+p4@Defb36
Mm9::chr2:152430154..152430175,+p2@Defb36
Mm9::chr2:152695188..152695197,+p10@Tpx2
Mm9::chr2:152695278..152695289,+p4@Tpx2
Mm9::chr2:160409132..160409136,+p1@ENSMUST00000128681
Mm9::chr2:172944903..172944916,-p1@Ctcfl
Mm9::chr2:181313067..181313079,+p4@Gm16119
Mm9::chr2:32985741..32985771,-p@chr2:32985741..32985771
-
Mm9::chr2:32987165..32987178,-p5@Garnl3
Mm9::chr2:84499222..84499239,+p1@Gm13718
Mm9::chr2:84518722..84518777,+p@chr2:84518722..84518777
+
Mm9::chr3:40512838..40512859,+p2@Slc25a31
Mm9::chr3:54985946..54985981,+p1@Sohlh2
Mm9::chr3:82680305..82680345,-p1@Rbm46
Mm9::chr4:107356833..107356836,-p7@Dmrtb1
Mm9::chr4:131476934..131476937,-p@chr4:131476934..131476937
-
Mm9::chr4:142984313..142984319,+p1@Pramel1
Mm9::chr4:59130705..59130715,-p@chr4:59130705..59130715
-
Mm9::chr4:89354729..89354776,+p1@Dmrta1
Mm9::chr4:89354785..89354801,+p2@Dmrta1
Mm9::chr4:89354887..89354888,+p5@Dmrta1
Mm9::chr5:109204040..109204051,-p@chr5:109204040..109204051
-
Mm9::chr5:130210839..130210864,-p@chr5:130210839..130210864
-
Mm9::chr5:135825867..135825910,-p1@Fkbp6
Mm9::chr5:135827139..135827150,-p@chr5:135827139..135827150
-
Mm9::chr5:135827158..135827172,-p@chr5:135827158..135827172
-
Mm9::chr5:135827306..135827308,-p@chr5:135827306..135827308
-
Mm9::chr5:138229081..138229099,+p3@Zcwpw1
Mm9::chr5:92821739..92821750,+p12@Art3
Mm9::chr5:92821756..92821769,+p8@Art3
Mm9::chr6:120726529..120726551,+p@chr6:120726529..120726551
+
Mm9::chr6:129335493..129335504,-p2@Clec12b
Mm9::chr6:129335515..129335528,-p1@Clec12b
Mm9::chr6:129336070..129336080,-p3@Clec12b
Mm9::chr6:18059063..18059084,-p2@Asz1
Mm9::chr6:34870941..34870954,+p1@Stra8
Mm9::chr6:34870971..34870973,+p2@Stra8
Mm9::chr6:49345558..49345593,+p2@Stk31
Mm9::chr6:82896892..82896918,+p1@D6Mm5e
Mm9::chr6:82948823..82948824,+p@chr6:82948823..82948824
+
Mm9::chr6:89046097..89046109,+p1@4933427D06Rik
Mm9::chr6:89046148..89046157,+p2@4933427D06Rik
Mm9::chr7:105261128..105261146,-p@chr7:105261128..105261146
-
Mm9::chr7:106461903..106461933,+p@chr7:106461903..106461933
+
Mm9::chr7:146212586..146212600,-p@chr7:146212586..146212600
-
Mm9::chr7:19703681..19703702,-p1@ENSMUST00000127433
p1@uc009fks.1
Mm9::chr7:19703706..19703753,-p1@ENSMUST00000141380
Mm9::chr7:27959571..27959595,-p4@Rab4b
Mm9::chr7:28403100..28403119,+p@chr7:28403100..28403119
+
Mm9::chr7:29416605..29416613,-p6@C330005M16Rik
Mm9::chr7:29680031..29680053,-p3@Actn4
Mm9::chr7:52741708..52741709,+p8@Tulp2
Mm9::chr7:52741730..52741769,+p2@Tulp2
Mm9::chr8:34627202..34627216,+p1@Tex15
Mm9::chr9:100543944..100543961,+p5@Stag1
Mm9::chr9:100543970..100543983,+p4@Stag1
Mm9::chr9:108334141..108334176,-p@chr9:108334141..108334176
-
Mm9::chr9:110760432..110760442,+p2@Prss50
Mm9::chr9:110760462..110760491,+p1@Prss50
Mm9::chr9:110782015..110782028,-p@chr9:110782015..110782028
-
Mm9::chr9:117949431..117949451,-p@chr9:117949431..117949451
-
Mm9::chr9:26668234..26668282,-p2@Glb1l3
Mm9::chr9:50369366..50369373,-p4@Tex12
Mm9::chr9:50369425..50369436,-p3@Tex12
Mm9::chr9:71567156..71567166,-p@chr9:71567156..71567166
-
Mm9::chr9:75316366..75316392,+p@chr9:75316366..75316392
+
Mm9::chr9:75316396..75316404,+p@chr9:75316396..75316404
+
Mm9::chrX:103416484..103416508,-p4@Taf9b
Mm9::chrX:104863295..104863324,+p1@Tbx22
Mm9::chrX:109008560..109008571,+p@chrX:109008560..109008571
+
Mm9::chrX:111398212..111398223,+p@chrX:111398212..111398223
+
Mm9::chrX:111398256..111398267,+p@chrX:111398256..111398267
+
Mm9::chrX:131011018..131011034,-p2@Taf7l
Mm9::chrX:131797846..131797855,+p@chrX:131797846..131797855
+
Mm9::chrX:132619925..132619942,-p2@Nxf3
Mm9::chrX:133461859..133461868,+p1@1700014N06Rik
Mm9::chrX:135744570..135744585,+p1@Mum1l1
Mm9::chrX:137348001..137348006,-p1@Tex13
Mm9::chrX:146870025..146870033,-p9@Tmem29
Mm9::chrX:146870053..146870084,-p4@Tmem29
Mm9::chrX:147604019..147604030,+p7@ENSMUST00000151778
Mm9::chrX:147604042..147604061,+p2@ENSMUST00000151778
Mm9::chrX:154006915..154006923,-p1@Yy2
Mm9::chrX:154136917..154136945,+p5@Smpx
Mm9::chrX:157520436..157520469,+p@chrX:157520436..157520469
+
Mm9::chrX:157735699..157735710,+p@chrX:157735699..157735710
+
Mm9::chrX:157735725..157735738,+p@chrX:157735725..157735738
+
Mm9::chrX:160944159..160944196,+p2@Asb9
Mm9::chrX:16195689..16195702,+p@chrX:16195689..16195702
+
Mm9::chrX:33565836..33565855,-p@chrX:33565836..33565855
-
Mm9::chrX:33997121..33997125,-p@chrX:33997121..33997125
-
Mm9::chrX:34032615..34032632,-p@chrX:34032615..34032632
-
Mm9::chrX:35474351..35474366,+p1@Rhox13
Mm9::chrX:45255952..45255969,+p@chrX:45255952..45255969
+
Mm9::chrX:49154255..49154260,-p1@Usp26
Mm9::chrX:50788129..50788149,+p2@Etd
Mm9::chrX:50788166..50788192,+p1@Etd
Mm9::chrX:54662324..54662337,+p1@Gm364
Mm9::chrX:55173231..55173238,+p@chrX:55173231..55173238
+
Mm9::chrX:56164649..56164665,+p1@4930550L24Rik
Mm9::chrX:56164680..56164690,+p2@4930550L24Rik
Mm9::chrX:64129336..64129342,-p@chrX:64129336..64129342
-
Mm9::chrX:65298026..65298036,-p@chrX:65298026..65298036
-
Mm9::chrX:6618776..6618784,-p1@Ccnb3
Mm9::chrX:69177772..69177783,+p1@Gm1141
Mm9::chrX:71422591..71422607,+p1@Tktl1
Mm9::chrX:7553670..7553688,-p4@Gata1
Mm9::chrX:7553714..7553733,-p6@Gata1
Mm9::chrX:83437105..83437121,+p1@Nr0b1
Mm9::chrX:83646393..83646403,-p@chrX:83646393..83646403
-
Mm9::chrX:89925362..89925393,-p@chrX:89925362..89925393
-
Mm9::chrX:91168346..91168351,-p@chrX:91168346..91168351
-
Mm9::chrX:92194346..92194357,-p1@ENSMUST00000142240
Mm9::chrX:93160368..93160377,-p@chrX:93160368..93160377
-
Mm9::chrX:93160385..93160398,-p@chrX:93160385..93160398
-
Mm9::chrX:97624245..97624251,+p1@Otud6a
Mm9::chrX:98254953..98254981,-p1@Tex11
Mm9::chrX:98254982..98254993,-p2@Tex11
Mm9::chrX:98891172..98891180,+p@chrX:98891172..98891180
+
Mm9::chrX:98989714..98989726,-p@chrX:98989714..98989726
-
Mm9::chrX:98989983..98990019,+p1@8030474K03Rik
Mm9::chrY:155026..155076,+p1@Ube1y1
Mm9::chrY:155089..155099,+p2@Ube1y1
Mm9::chrY:796214..796225,-p1@Usp9y


Enriched pathways on this co-expression cluster<b>Summary:</b><br>Canonical pathway gene sets were compiled from Reactome, Wikipathways and KEGG. For the major signaling pathways, the transcriptionally-regulated genes (downstream targets) were obtained from Netpath. Combined, the canonical pathways and downstream targets totaled 489 human gene sets. The corresponding M. musculus gene sets were inferred by homology using the HomoloGene database. Enrichment for each of the canonical 489 pathways and gene sets included in the co-expression cluster was assessed by the hypergeometric probability. The resulting P values were also then adjusted by the Benjamini-Hochberg method for multiple comparisons.<br><b>Analyst: </b>Emmanuel Dimont<br><br>link to source dataset<br>data



Relative expression of the co-expression cluster over median <br>Analyst:




Enriched sample ontology terms on this co-expression cluster<b>Summary:</b>To summarize promoter activities (expression profile of a TSS region) across ~1000 samples, we performed enrichment analysis based on FANTOM5 Sample Ontology (FF ontology). The question here is “in which type of samples the promoter is more active”. To answer this question, we compared expressions (TPMs) in the samples associated with a sample ontology term and the rest of the samples by using the Mann-Whitney rank sum test. To summarize ontologies enriched in this co-expression cluster, we ran the same analysis on an averaged expression profile of all promoters that make up. <b>Analyst:</b> Hideya Kawaji <br><br>links to source dataset<br><br><br>uberon_data<br><br>


TFBS overrepresentation<b>Summary:</b>The values shown are the p-values for overrepresentation of the motif in this coexpression cluster. So a small p-value means a strong overrepresentation. <b>Analyst:</b> Michiel de Hoon <br><br>link to source data <br> Novel motifs <br>data <br><br> Jaspar motifs <br>data

Novel motifs




JASPAR motifs


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