FFCP PHASE1:Mm9::chr19:19010867..19010874,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr19:19010867..19010874,- | |id=chr19:19010867..19010874,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003056!4.86e-26!49;UBERON:0000033!9.39e-26!63;UBERON:0002346!2.94e-25!71;UBERON:0003075!2.94e-25!71;UBERON:0007284!2.94e-25!71;UBERON:0004121!3.89e-20!102;UBERON:0000924!3.89e-20!102;UBERON:0006601!3.89e-20!102;UBERON:0001049!6.27e-19!52;UBERON:0005068!6.27e-19!52;UBERON:0006241!6.27e-19!52;UBERON:0007135!6.27e-19!52;UBERON:0002616!4.45e-17!49;UBERON:0007811!1.03e-16!86;UBERON:0000955!1.29e-16!50;UBERON:0006238!1.29e-16!50;UBERON:0000970!2.85e-15!9;UBERON:0000019!2.85e-15!9;UBERON:0000047!2.85e-15!9;UBERON:0004088!2.85e-15!9;UBERON:0002104!2.85e-15!9;UBERON:0001456!2.85e-15!9;UBERON:0003072!2.85e-15!9;UBERON:0003071!2.85e-15!9;UBERON:0004128!2.85e-15!9;UBERON:0000073!8.32e-15!75;UBERON:0001016!8.32e-15!75;UBERON:0000153!1.29e-14!94;UBERON:0003080!1.58e-14!40;UBERON:0001017!3.19e-14!73;UBERON:0005743!3.19e-14!73;UBERON:0002780!1.85e-13!39;UBERON:0001890!1.85e-13!39;UBERON:0006240!1.85e-13!39;UBERON:0001444!3.50e-12!11;UBERON:0000020!5.03e-11!12;UBERON:0001032!5.03e-11!12;UBERON:0004456!5.03e-11!12;UBERON:0005085!4.78e-10!13;UBERON:0002020!1.24e-09!34;UBERON:0001894!1.78e-08!10;UBERON:0006222!1.78e-08!10;UBERON:0002791!3.08e-07!29;UBERON:0003528!3.08e-07!29;UBERON:0001893!3.08e-07!29 | |ontology_enrichment_uberon=UBERON:0003056!4.86e-26!49;UBERON:0000033!9.39e-26!63;UBERON:0002346!2.94e-25!71;UBERON:0003075!2.94e-25!71;UBERON:0007284!2.94e-25!71;UBERON:0004121!3.89e-20!102;UBERON:0000924!3.89e-20!102;UBERON:0006601!3.89e-20!102;UBERON:0001049!6.27e-19!52;UBERON:0005068!6.27e-19!52;UBERON:0006241!6.27e-19!52;UBERON:0007135!6.27e-19!52;UBERON:0002616!4.45e-17!49;UBERON:0007811!1.03e-16!86;UBERON:0000955!1.29e-16!50;UBERON:0006238!1.29e-16!50;UBERON:0000970!2.85e-15!9;UBERON:0000019!2.85e-15!9;UBERON:0000047!2.85e-15!9;UBERON:0004088!2.85e-15!9;UBERON:0002104!2.85e-15!9;UBERON:0001456!2.85e-15!9;UBERON:0003072!2.85e-15!9;UBERON:0003071!2.85e-15!9;UBERON:0004128!2.85e-15!9;UBERON:0000073!8.32e-15!75;UBERON:0001016!8.32e-15!75;UBERON:0000153!1.29e-14!94;UBERON:0003080!1.58e-14!40;UBERON:0001017!3.19e-14!73;UBERON:0005743!3.19e-14!73;UBERON:0002780!1.85e-13!39;UBERON:0001890!1.85e-13!39;UBERON:0006240!1.85e-13!39;UBERON:0001444!3.50e-12!11;UBERON:0000020!5.03e-11!12;UBERON:0001032!5.03e-11!12;UBERON:0004456!5.03e-11!12;UBERON:0005085!4.78e-10!13;UBERON:0002020!1.24e-09!34;UBERON:0001894!1.78e-08!10;UBERON:0006222!1.78e-08!10;UBERON:0002791!3.08e-07!29;UBERON:0003528!3.08e-07!29;UBERON:0001893!3.08e-07!29 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000970,1.28e-52,9;UBERON:0000019,1.28e-52,9;UBERON:0000047,1.28e-52,9;UBERON:0010312,1.28e-52,9;UBERON:0004088,1.28e-52,9;UBERON:0002104,1.28e-52,9;UBERON:0001456,1.28e-52,9;UBERON:0003072,1.28e-52,9;UBERON:0004128,1.28e-52,9;UBERON:0003071,1.28e-52,9;UBERON:0001444,4.40e-43,11;UBERON:0000020,1.67e-39,12;UBERON:0001032,1.67e-39,12;UBERON:0004456,1.67e-39,12;UBERON:0000033,1.78e-36,13;UBERON:0005085,1.78e-36,13;UBERON:0003056,7.21e-16,49;UBERON:0007811,3.74e-13,36;UBERON:0002346,4.30e-12,64;UBERON:0003075,4.30e-12,64;UBERON:0007284,4.30e-12,64;UBERON:0000153,5.49e-11,43;UBERON:0010371,1.45e-10,73;UBERON:0010314,2.60e-08,92;UBERON:0004121,4.90e-08,95;UBERON:0000924,4.90e-08,95;UBERON:0006601,4.90e-08,95 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,0,0.510749352340751,0.614426133024974,0,0.274462930807229,0.52091337055676,0,0,0.15279824777681,0.589257170947335,0.284743361598206,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0.767146371990992,0.41557608911912,0.324482526135515,0,0,0,0.210441855886474,1.04096354370163,0,1.0803727788321,2.71268672104287,2.31324097114515,3.20284300712124,2.81105173679186,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,1.6942555278512,0.920650473014354,0.572895513439397,0.859265911718438,0,0,0,0,0,1.55328093525546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0.561142271657738,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0850432901510698,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103689612308478,0,0,0,0,0,0.0958454710182364,0,0,0.510749352340751,0.614426133024974,0,0.274462930807229,0.52091337055676,0,0,0.15279824777681,0.589257170947335,0.284743361598206,0.186399445825301,0,0.0755715601067855,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.292780797011547,0,0,0,0,0,0.149790639404823,0,0,0.173824320192276,0.767146371990992,0.41557608911912,0.324482526135515,0,0,0,0.210441855886474,1.04096354370163,0,1.0803727788321,2.71268672104287,2.31324097114515,3.20284300712124,2.81105173679186,1.55222022443409,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102904612379284,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160550589987792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.36012218806262,0.129358683782755,0.214337035031592,0.177340233642274,0.178368817602071,0,0,0,0,0,0,0.161464426695906,0,0,0,0,0.18542530201051,0,0,0.185194527369712,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.187682475451182,0.183151624267265,0,0,1.6942555278512,0.920650473014354,0.572895513439397,0.859265911718438,0,0,0,0,0,1.55328093525546,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.115884325944855,0,0,0,0,0,0,0,0,0,0,0.263069711437843,0,0.561142271657738,0,0,0.409231043169689,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:19010867..19010874,- | |short_description=p@chr19:19010867..19010874,- | ||
}} | }} |
Revision as of 19:58, 13 November 2012
Short description: | p@chr19:19010867..19010874, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr19:19010867..19010874, - |
Coexpression cluster: | MCL_coexpression_mm9:53 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
eye | 1.28e-52 | 9 |
camera-type eye | 1.28e-52 | 9 |
simple eye | 1.28e-52 | 9 |
immature eye | 1.28e-52 | 9 |
ocular region | 1.28e-52 | 9 |
visual system | 1.28e-52 | 9 |
face | 1.28e-52 | 9 |
optic cup | 1.28e-52 | 9 |
optic vesicle | 1.28e-52 | 9 |
eye primordium | 1.28e-52 | 9 |
subdivision of head | 4.40e-43 | 11 |
sense organ | 1.67e-39 | 12 |
sensory system | 1.67e-39 | 12 |
entire sense organ system | 1.67e-39 | 12 |
head | 1.78e-36 | 13 |
ectodermal placode | 1.78e-36 | 13 |
pre-chordal neural plate | 7.21e-16 | 49 |
craniocervical region | 3.74e-13 | 36 |
neurectoderm | 4.30e-12 | 64 |
neural plate | 4.30e-12 | 64 |
presumptive neural plate | 4.30e-12 | 64 |
anterior region of body | 5.49e-11 | 43 |
ecto-epithelium | 1.45e-10 | 73 |
structure with developmental contribution from neural crest | 2.60e-08 | 92 |
ectoderm-derived structure | 4.90e-08 | 95 |
ectoderm | 4.90e-08 | 95 |
presumptive ectoderm | 4.90e-08 | 95 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.