FFCP PHASE1:Mm9::chr7:53122850..53122863,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 8: | Line 8: | ||
|id=chr7:53122850..53122863,- | |id=chr7:53122850..53122863,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019_2=CL:0002610,1.05e-26,3 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000955!1.35e-11!50;UBERON:0006238!1.35e-11!50;UBERON:0002616!1.19e-10!49;UBERON:0001049!4.27e-09!52;UBERON:0005068!4.27e-09!52;UBERON:0006241!4.27e-09!52;UBERON:0007135!4.27e-09!52;UBERON:0000033!2.07e-08!63;UBERON:0001017!7.48e-08!73;UBERON:0005743!7.48e-08!73;UBERON:0003080!7.66e-08!40;UBERON:0000073!1.92e-07!75;UBERON:0001016!1.92e-07!75;UBERON:0002780!3.82e-07!39;UBERON:0001890!3.82e-07!39;UBERON:0006240!3.82e-07!39 | |ontology_enrichment_uberon=UBERON:0000955!1.35e-11!50;UBERON:0006238!1.35e-11!50;UBERON:0002616!1.19e-10!49;UBERON:0001049!4.27e-09!52;UBERON:0005068!4.27e-09!52;UBERON:0006241!4.27e-09!52;UBERON:0007135!4.27e-09!52;UBERON:0000033!2.07e-08!63;UBERON:0001017!7.48e-08!73;UBERON:0005743!7.48e-08!73;UBERON:0003080!7.66e-08!40;UBERON:0000073!1.92e-07!75;UBERON:0001016!1.92e-07!75;UBERON:0002780!3.82e-07!39;UBERON:0001890!3.82e-07!39;UBERON:0006240!3.82e-07!39 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004684,1.05e-26,3;UBERON:0002275,1.05e-26,3;UBERON:0002021,8.21e-22,10;UBERON:0000411,8.21e-22,10;UBERON:0001950,8.21e-22,10;UBERON:0002619,6.58e-13,17;UBERON:0000073,1.08e-12,54;UBERON:0001017,1.42e-11,73;UBERON:0001016,2.99e-11,75;UBERON:0000956,1.80e-10,21;UBERON:0001869,1.80e-10,21;UBERON:0000203,1.80e-10,21;UBERON:0000955,6.16e-09,47;UBERON:0006238,6.16e-09,47;UBERON:0004121,9.21e-09,95;UBERON:0000924,9.21e-09,95;UBERON:0006601,9.21e-09,95;UBERON:0002780,5.33e-08,39;UBERON:0001890,5.33e-08,39;UBERON:0006240,5.33e-08,39;UBERON:0003080,8.54e-08,40;UBERON:0003528,1.34e-07,29;UBERON:0002791,1.34e-07,29;UBERON:0001893,1.34e-07,29;UBERON:0002616,9.43e-07,46 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,1.10115880999389,2.55374676170375,1.53606533256243,0.131886287730194,0.182975287204819,0,0,0,0,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.299581278809645,0.457500602818626,0,0.347648640384553,0.767146371990992,4.36354893575076,0.973447578406546,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0.378212160335639,0,0.219195732427575,0.556094498451196,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0.308713837137853,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.586058432961016,0.163934945376675,0,0,0,0,0,0,0,0,0,0,3.53453448063988,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0.535106452806212,0.164549020602121,0,0,0,0,0,0,0,0,0,0.291480836629851,0.556275906031529,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0.337912250981556,0,0,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,2.30162618253588,1.14579102687879,0.68741272937475,1.37016503954128,0,0,1.35096360967266,0,0,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0,0.128050304809739,0.114870937911227,0,0,0,0.412085900803307,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.271608227691724,0,0,0,0.409231043169689,0,0,0.499621155875892,0,0,0,0.220591419119515,0.231867835620421 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.988866362566974,0,0,0,0,0,0,0,0,0,0.0958454710182364,0,1.10115880999389,2.55374676170375,1.53606533256243,0.131886287730194,0.182975287204819,0,0,0,0,0,0.142371680799103,0.186399445825301,0,0,0,0,0,0,0,0,0.140444420131752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161766849947409,0,0,0,0,0,0,0,0,0,0.299581278809645,0.457500602818626,0,0.347648640384553,0.767146371990992,4.36354893575076,0.973447578406546,0,0,0,0,0,0,0,0,0.0680364991513279,0,0,0,0,0.378212160335639,0,0.219195732427575,0.556094498451196,0,0.205782136407943,0.398068533636986,0,0,0,0,0,0,0,0,0,0.232533944750408,0,0,0,0,0,0,0,0,0,0.308713837137853,0,0,0,0.232236671860439,0.128867461322093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.203651327845314,0,0,0,0,0,0,0,0,0,0,0,0,0.25462585178142,0,0.162135226775035,0,0,0,0,0,0,0,0,0,0,0,0.234690248288502,0,0,0,0,0,0,0,0,0,0,0,0,0,0.321101179975584,0.586058432961016,0.163934945376675,0,0,0,0,0,0,0,0,0,0,3.53453448063988,0.141940085208269,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129358683782755,0.214337035031592,0,0.535106452806212,0.164549020602121,0,0,0,0,0,0,0,0,0,0.291480836629851,0.556275906031529,0,0.206386867963223,0,0,0,0,0,0,0,0,0,0,0,0.418176592028937,0.218362563746178,0,0.0826534557253359,0,0,0,0,0,0,0,0.129159823477731,0.337912250981556,0,0,0,0.241584120826006,0.288030006257865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.6942555278512,2.30162618253588,1.14579102687879,0.68741272937475,1.37016503954128,0,0,1.35096360967266,0,0,0,0,0.170733605754134,0.243106717068294,0,0.183843508450014,0,0,0,0,0,0,0,0.128050304809739,0.114870937911227,0,0,0,0.412085900803307,0.147198920134397,0,0,0,0,0.0941093804153306,0.0846146078916765,0.182927972872773,0.263069711437843,0.271608227691724,0,0,0,0.409231043169689,0,0,0.499621155875892,0,0,0,0.220591419119515,0.231867835620421 | ||
|short_description=p9@Grin2d | |short_description=p9@Grin2d | ||
}} | }} |
Revision as of 07:40, 14 November 2012
Short description: | p9@Grin2d |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_9_at_Grin2d_5end |
Coexpression cluster: | MCL_coexpression_mm9:1 |
Association with transcript: | -351bp_to_ENSMUST00000002848_5end |
EntrezGene: | Grin2d |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
raphe nuclei neuron | 1.05e-26 | 3 |
Ontology term | p-value | n |
---|---|---|
raphe nuclei | 1.05e-26 | 3 |
reticular formation | 1.05e-26 | 3 |
occipital lobe | 8.21e-22 | 10 |
visual cortex | 8.21e-22 | 10 |
neocortex | 8.21e-22 | 10 |
regional part of cerebral cortex | 6.58e-13 | 17 |
regional part of nervous system | 1.08e-12 | 54 |
central nervous system | 1.42e-11 | 73 |
nervous system | 2.99e-11 | 75 |
cerebral cortex | 1.80e-10 | 21 |
cerebral hemisphere | 1.80e-10 | 21 |
pallium | 1.80e-10 | 21 |
brain | 6.16e-09 | 47 |
future brain | 6.16e-09 | 47 |
ectoderm-derived structure | 9.21e-09 | 95 |
ectoderm | 9.21e-09 | 95 |
presumptive ectoderm | 9.21e-09 | 95 |
regional part of forebrain | 5.33e-08 | 39 |
forebrain | 5.33e-08 | 39 |
future forebrain | 5.33e-08 | 39 |
anterior neural tube | 8.54e-08 | 40 |
brain grey matter | 1.34e-07 | 29 |
regional part of telencephalon | 1.34e-07 | 29 |
telencephalon | 1.34e-07 | 29 |
regional part of brain | 9.43e-07 | 46 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.