FFCP PHASE1:Hg19::chr17:71398188..71398201,-: Difference between revisions
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
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|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:169;6.78e-08;6 | |ontology_enrichment_disease_v019=DOID:169;6.78e-08;6 | ||
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|short_description=p6@SDK2 | |short_description=p6@SDK2 | ||
}} | }} |
Revision as of 20:29, 17 November 2012
Short description: | p6@SDK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_6_at_SDK2_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 78bp_to_BC045763_5end |
EntrezGene: | SDK2 |
HGNC: | 19308 |
UniProt: | Q58EX2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 4.66e-21 | 2 |
keratinocyte | 2.97e-09 | 5 |
stratified squamous epithelial cell | 6.34e-08 | 6 |
keratin accumulating cell | 6.34e-08 | 6 |
stratified epithelial cell | 6.34e-08 | 6 |
keratinizing barrier epithelial cell | 6.34e-08 | 6 |
epithelial fate stem cell | 6.34e-08 | 6 |
stratified epithelial stem cell | 6.34e-08 | 6 |
surface ectodermal cell | 6.34e-08 | 6 |
Ontology term | p-value | n |
---|---|---|
testis | 6.64e-21 | 8 |
male reproductive organ | 1.62e-15 | 11 |
sympathetic nervous system | 3.22e-09 | 5 |
autonomic nervous system | 3.22e-09 | 5 |
gonad | 1.27e-08 | 21 |
indifferent external genitalia | 1.27e-08 | 21 |
indifferent gonad | 1.27e-08 | 21 |
gonad primordium | 1.27e-08 | 21 |
external genitalia | 2.82e-08 | 22 |
male organism | 2.82e-08 | 22 |
male reproductive system | 2.82e-08 | 22 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 6.78e-08 | 6 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.