FFCP PHASE1:Hg19::chr17:26898516..26898560,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000222!8.51e-13!119;CL:0000066!9.49e-11!254;CL:0002321!2.72e-10!248;CL:0000220!2.84e-10!246;CL:0000055!3.81e-10!180;CL:0000548!2.12e-09!679;CL:0000004!2.12e-09!679;CL:0000255!2.12e-09!679;CL:0000183!2.83e-09!59;CL:0000012!1.14e-08!682;CL:1000449!5.20e-08!16;CL:1000497!1.59e-07!18;CL:0002518!1.59e-07!18;CL:0000144!2.91e-07!625;CL:0000680!3.16e-07!57;CL:0000056!3.16e-07!57;CL:0000355!3.16e-07!57;CL:0000187!3.71e-07!54;CL:0000192!6.80e-07!42;CL:0000514!6.80e-07!42 | |ontology_enrichment_celltype=CL:0000222!8.51e-13!119;CL:0000066!9.49e-11!254;CL:0002321!2.72e-10!248;CL:0000220!2.84e-10!246;CL:0000055!3.81e-10!180;CL:0000548!2.12e-09!679;CL:0000004!2.12e-09!679;CL:0000255!2.12e-09!679;CL:0000183!2.83e-09!59;CL:0000012!1.14e-08!682;CL:1000449!5.20e-08!16;CL:1000497!1.59e-07!18;CL:0002518!1.59e-07!18;CL:0000144!2.91e-07!625;CL:0000680!3.16e-07!57;CL:0000056!3.16e-07!57;CL:0000355!3.16e-07!57;CL:0000187!3.71e-07!54;CL:0000192!6.80e-07!42;CL:0000514!6.80e-07!42 | ||
|ontology_enrichment_celltype_v019=CL:1000449;3.94e-08;15!CL:1000497;1.38e-07;17!CL:0002518;1.38e-07;17 | |ontology_enrichment_celltype_v019=CL:1000449;3.94e-08;15!CL:1000497;1.38e-07;17!CL:0002518;1.38e-07;17 | ||
|ontology_enrichment_celltype_v019_2=CL:0000222,3.74e-13,121;CL:0000066,1.13e-10,253;CL:0002321,1.35e-10,250;CL:1000449,3.93e-08,15;CL:1000497,1.34e-07,17;CL:0002518,1.34e-07,17;CL:0000680,2.81e-07,58;CL:0000056,2.81e-07,58;CL:0000355,2.81e-07,58;CL:0000187,3.31e-07,55;CL:0000192,6.19e-07,43;CL:0000514,6.19e-07,43 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
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|ontology_enrichment_uberon_v019=UBERON:0006555;3.94e-08;15!UBERON:0004819;3.94e-08;15!UBERON:0001285;3.94e-08;15!UBERON:0007684;3.94e-08;15!UBERON:0000353;6.73e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0006555;3.94e-08;15!UBERON:0004819;3.94e-08;15!UBERON:0001285;3.94e-08;15!UBERON:0007684;3.94e-08;15!UBERON:0000353;6.73e-08;15 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003104,4.15e-10,160;UBERON:0009142,4.15e-10,160;UBERON:0003914,1.00e-09,117;UBERON:0004211,3.93e-08,15;UBERON:0009773,3.93e-08,15;UBERON:0001231,3.93e-08,15;UBERON:0001285,3.93e-08,15;UBERON:0007684,3.93e-08,15;UBERON:0004208,3.93e-08,15;UBERON:0000353,6.75e-08,15;UBERON:0007503,1.49e-07,78;UBERON:0002049,1.85e-07,78;UBERON:0007798,1.85e-07,78;UBERON:0006555,1.95e-07,16;UBERON:0004819,1.95e-07,16;UBERON:0000490,3.16e-07,148;UBERON:0000119,4.23e-07,309;UBERON:0000483,7.07e-07,306;UBERON:0004872,7.16e-07,83;UBERON:0001009,7.81e-07,112 | |||
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| ||
|short_description=p1@PIGS | |short_description=p1@PIGS | ||
}} | }} |
Revision as of 20:30, 17 November 2012
Short description: | p1@PIGS |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_PIGS_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000308360, ENST00000543734_5end |
EntrezGene: | PIGS |
HGNC: | 14937 |
UniProt: | Q96S52F5H019 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 3.74e-13 | 121 |
epithelial cell | 1.13e-10 | 253 |
embryonic cell | 1.35e-10 | 250 |
epithelial cell of nephron | 3.93e-08 | 15 |
kidney cell | 1.34e-07 | 17 |
kidney epithelial cell | 1.34e-07 | 17 |
muscle precursor cell | 2.81e-07 | 58 |
myoblast | 2.81e-07 | 58 |
multi-potent skeletal muscle stem cell | 2.81e-07 | 58 |
muscle cell | 3.31e-07 | 55 |
smooth muscle cell | 6.19e-07 | 43 |
smooth muscle myoblast | 6.19e-07 | 43 |
Ontology term | p-value | n |
---|---|---|
mesenchyme | 4.15e-10 | 160 |
entire embryonic mesenchyme | 4.15e-10 | 160 |
epithelial tube | 1.00e-09 | 117 |
nephron epithelium | 3.93e-08 | 15 |
renal tubule | 3.93e-08 | 15 |
nephron tubule | 3.93e-08 | 15 |
nephron | 3.93e-08 | 15 |
uriniferous tubule | 3.93e-08 | 15 |
nephrogenic mesenchyme | 3.93e-08 | 15 |
parenchyma | 6.75e-08 | 15 |
epithelial vesicle | 1.49e-07 | 78 |
vasculature | 1.85e-07 | 78 |
vascular system | 1.85e-07 | 78 |
excretory tube | 1.95e-07 | 16 |
kidney epithelium | 1.95e-07 | 16 |
unilaminar epithelium | 3.16e-07 | 148 |
cell layer | 4.23e-07 | 309 |
epithelium | 7.07e-07 | 306 |
splanchnic layer of lateral plate mesoderm | 7.16e-07 | 83 |
circulatory system | 7.81e-07 | 112 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.