FFCP PHASE1:Hg19::chrX:12993240..12993270,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0000003!3.11e-20!722;CL:0000048!1.27e-19!430;CL:0000034!2.51e-19!444;CL:0002371!2.31e-18!591;CL:0000723!2.57e-18!436;CL:0000144!6.85e-17!625;CL:0002057!9.83e-17!42;CL:0002009!7.71e-15!65;CL:0000766!2.18e-14!76;CL:0000860!2.90e-14!45;CL:0002194!6.31e-14!63;CL:0000576!6.31e-14!63;CL:0000040!6.31e-14!63;CL:0000559!6.31e-14!63;CL:0000012!4.36e-13!682;CL:0000548!5.29e-13!679;CL:0000004!5.29e-13!679;CL:0000255!5.29e-13!679;CL:0000557!9.13e-13!71;CL:0000839!1.49e-11!70;CL:0002320!2.66e-11!365;CL:0000134!7.88e-11!358;CL:0000219!5.94e-08!390;CL:0000738!9.24e-08!140;CL:0000763!3.75e-07!112;CL:0000049!3.75e-07!112 | |ontology_enrichment_celltype=CL:0000003!3.11e-20!722;CL:0000048!1.27e-19!430;CL:0000034!2.51e-19!444;CL:0002371!2.31e-18!591;CL:0000723!2.57e-18!436;CL:0000144!6.85e-17!625;CL:0002057!9.83e-17!42;CL:0002009!7.71e-15!65;CL:0000766!2.18e-14!76;CL:0000860!2.90e-14!45;CL:0002194!6.31e-14!63;CL:0000576!6.31e-14!63;CL:0000040!6.31e-14!63;CL:0000559!6.31e-14!63;CL:0000012!4.36e-13!682;CL:0000548!5.29e-13!679;CL:0000004!5.29e-13!679;CL:0000255!5.29e-13!679;CL:0000557!9.13e-13!71;CL:0000839!1.49e-11!70;CL:0002320!2.66e-11!365;CL:0000134!7.88e-11!358;CL:0000219!5.94e-08!390;CL:0000738!9.24e-08!140;CL:0000763!3.75e-07!112;CL:0000049!3.75e-07!112 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.03e-12;33!CL:0002057;5.03e-12;33!CL:0000473;1.33e-11;39!CL:0000234;1.33e-11;39!CL:0000576;2.63e-09;48!CL:0000766;6.88e-08;69 | |ontology_enrichment_celltype_v019=CL:0000860;5.03e-12;33!CL:0002057;5.03e-12;33!CL:0000473;1.33e-11;39!CL:0000234;1.33e-11;39!CL:0000576;2.63e-09;48!CL:0000766;6.88e-08;69 | ||
|ontology_enrichment_celltype_v019_2=CL:0000048,5.28e-21,427;CL:0000034,1.10e-20,441;CL:0000723,1.21e-19,433;CL:0000473,1.11e-18,48;CL:0000234,1.11e-18,48;CL:0002009,4.08e-17,61;CL:0000860,9.32e-17,42;CL:0002057,9.32e-17,42;CL:0000766,2.24e-16,72;CL:0002194,3.79e-16,59;CL:0000576,3.79e-16,59;CL:0000040,3.79e-16,59;CL:0000559,3.79e-16,59;CL:0000557,9.67e-15,67;CL:0000839,2.57e-13,66;CL:0002320,3.88e-12,361;CL:0000134,1.19e-11,354;CL:0000219,1.27e-08,386;CL:0000738,1.29e-08,136;CL:0000763,3.24e-08,108;CL:0000049,3.24e-08,108 | |||
|ontology_enrichment_development_v019=CL:0002057;4.01e-12;42 | |ontology_enrichment_development_v019=CL:0002057;4.01e-12;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003081!3.52e-18!216;UBERON:0002204!5.59e-15!167;UBERON:0002193!1.51e-14!112;UBERON:0002390!3.40e-14!102;UBERON:0003061!3.40e-14!102;UBERON:0002371!8.91e-14!80;UBERON:0004765!1.10e-11!101;UBERON:0001434!1.10e-11!101;UBERON:0001474!5.35e-11!86;UBERON:0002384!7.21e-10!375;UBERON:0004535!3.49e-08!110;UBERON:0002405!6.80e-08!115;UBERON:0001009!2.84e-07!113 | |ontology_enrichment_uberon=UBERON:0003081!3.52e-18!216;UBERON:0002204!5.59e-15!167;UBERON:0002193!1.51e-14!112;UBERON:0002390!3.40e-14!102;UBERON:0003061!3.40e-14!102;UBERON:0002371!8.91e-14!80;UBERON:0004765!1.10e-11!101;UBERON:0001434!1.10e-11!101;UBERON:0001474!5.35e-11!86;UBERON:0002384!7.21e-10!375;UBERON:0004535!3.49e-08!110;UBERON:0002405!6.80e-08!115;UBERON:0001009!2.84e-07!113 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0003081,1.18e-18,203;UBERON:0002204,1.14e-16,167;UBERON:0002193,3.86e-16,108;UBERON:0000926,5.16e-16,315;UBERON:0004120,5.16e-16,315;UBERON:0006603,5.16e-16,315;UBERON:0002390,7.36e-16,98;UBERON:0003061,7.36e-16,98;UBERON:0002371,1.07e-15,76;UBERON:0004765,3.59e-14,90;UBERON:0002405,2.19e-13,93;UBERON:0001434,3.86e-13,100;UBERON:0001474,1.37e-12,82;UBERON:0002384,1.14e-10,371;UBERON:0004535,2.98e-08,109;UBERON:0001009,2.48e-07,112 | |||
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| ||
|short_description=p3@TMSB4X | |short_description=p3@TMSB4X | ||
}} | }} |
Revision as of 21:48, 17 November 2012
Short description: | p3@TMSB4X |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_TMSB4X_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENST00000380636_5end |
EntrezGene: | TMSB4X |
HGNC: | 11881 |
UniProt: | P62328 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
multi fate stem cell | 5.28e-21 | 427 |
stem cell | 1.10e-20 | 441 |
somatic stem cell | 1.21e-19 | 433 |
defensive cell | 1.11e-18 | 48 |
phagocyte | 1.11e-18 | 48 |
macrophage dendritic cell progenitor | 4.08e-17 | 61 |
classical monocyte | 9.32e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 9.32e-17 | 42 |
myeloid leukocyte | 2.24e-16 | 72 |
monopoietic cell | 3.79e-16 | 59 |
monocyte | 3.79e-16 | 59 |
monoblast | 3.79e-16 | 59 |
promonocyte | 3.79e-16 | 59 |
granulocyte monocyte progenitor cell | 9.67e-15 | 67 |
myeloid lineage restricted progenitor cell | 2.57e-13 | 66 |
connective tissue cell | 3.88e-12 | 361 |
mesenchymal cell | 1.19e-11 | 354 |
motile cell | 1.27e-08 | 386 |
leukocyte | 1.29e-08 | 136 |
myeloid cell | 3.24e-08 | 108 |
common myeloid progenitor | 3.24e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
lateral plate mesoderm | 1.18e-18 | 203 |
musculoskeletal system | 1.14e-16 | 167 |
hemolymphoid system | 3.86e-16 | 108 |
mesoderm | 5.16e-16 | 315 |
mesoderm-derived structure | 5.16e-16 | 315 |
presumptive mesoderm | 5.16e-16 | 315 |
hematopoietic system | 7.36e-16 | 98 |
blood island | 7.36e-16 | 98 |
bone marrow | 1.07e-15 | 76 |
skeletal element | 3.59e-14 | 90 |
immune system | 2.19e-13 | 93 |
skeletal system | 3.86e-13 | 100 |
bone element | 1.37e-12 | 82 |
connective tissue | 1.14e-10 | 371 |
cardiovascular system | 2.98e-08 | 109 |
circulatory system | 2.48e-07 | 112 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.