FFCP PHASE1:Hg19::chr11:2159969..2159986,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000349;1.27e-16;19!CL:0000244;1.11e-08;4!CL:0000731;1.11e-08;4!CL:0002541;2.48e-08;3!CL:0002577;3.37e-08;3 | |ontology_enrichment_celltype_v019=CL:0000349;1.27e-16;19!CL:0000244;1.11e-08;4!CL:0000731;1.11e-08;4!CL:0002541;2.48e-08;3!CL:0002577;3.37e-08;3 | ||
|ontology_enrichment_celltype_v019_2=CL:0000349,1.33e-16,19;CL:0000244,9.43e-09,4;CL:0000731,9.43e-09,4;CL:0002541,2.52e-08,3;CL:0002577,3.50e-08,3 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005631!6.33e-14!14;UBERON:0000158!6.33e-14!14;UBERON:0000478!1.66e-11!24;UBERON:0003124!2.80e-09!7;UBERON:0004119!7.87e-08!169;UBERON:0000925!7.87e-08!169;UBERON:0006595!7.87e-08!169 | |ontology_enrichment_uberon=UBERON:0005631!6.33e-14!14;UBERON:0000158!6.33e-14!14;UBERON:0000478!1.66e-11!24;UBERON:0003124!2.80e-09!7;UBERON:0004119!7.87e-08!169;UBERON:0000925!7.87e-08!169;UBERON:0006595!7.87e-08!169 | ||
|ontology_enrichment_uberon_v019=UBERON:0000478;2.38e-17;24!UBERON:0005631;2.75e-15;10!UBERON:0000158;2.75e-15;10!UBERON:0001987;2.42e-10;4!UBERON:0005284;2.79e-10;5!UBERON:0000922;3.47e-09;49!UBERON:0000305;4.57e-09;7!UBERON:0003124;2.48e-08;3!UBERON:0000920;2.48e-08;3!UBERON:0000365;6.12e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0000478;2.38e-17;24!UBERON:0005631;2.75e-15;10!UBERON:0000158;2.75e-15;10!UBERON:0001987;2.42e-10;4!UBERON:0005284;2.79e-10;5!UBERON:0000922;3.47e-09;49!UBERON:0000305;4.57e-09;7!UBERON:0003124;2.48e-08;3!UBERON:0000920;2.48e-08;3!UBERON:0000365;6.12e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.13e-23,14;UBERON:0000158,1.13e-23,14;UBERON:0000478,2.49e-17,24;UBERON:0003124,5.86e-17,7;UBERON:0001987,2.52e-10,4;UBERON:0004340,2.52e-10,4;UBERON:0005284,2.55e-10,5;UBERON:0000305,4.62e-09,7;UBERON:0000920,2.52e-08,3;UBERON:0004871,7.43e-08,8;UBERON:0000365,5.37e-07,5 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,0,1.34088328328186,0,0,0,0,0.491467873003018,0,28.1789370047922,38.2462118431258,0.37129905888014,0.662794751455832,0,0,0,0,0,0.408001382488506,1.25381888591235,0,0,0.125542639594803,0,0,0,0,0,1.39334510984468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,2.43317435151318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0,0.258416759169329,0,0,0,0,0,0,1.62028389576352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0,1.66493170409425,7.49028701823999,0.468642863667593,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,1.48360157567134,0,0,0.336672227908132,0.375355559615893,0,0.438977620880838,0,0.751190294532984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97529702878181,0.10366105501537,0.252320850875628,0,0,0,0,1.85747171212792,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,2.94017422771084,0,0,0,0,15.8655085720616,0,0,0,0,0.555530670951178,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1798003441664,0.1466765716419,0,0,0,0.531876233169741,0,0.257207374262142,0,0.532844358032199,1.57275793023962,33.6425395342695,0.823240336780769,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,2.05476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33113834266366,1.50051156317903,0.542530047399471,1.24782516918484,0.892144943985809,0.630809660135739,0.702848489956279,0,0,3.10419213877515,0,0.553107505625109,0,19.1885134313486,39.1183503144376,0,0,0,10.0032098577266,26.6296703216795,110.977237651993,0,0,0,0,0,0.321707842287215,0,0,0,0,0,0,18.7332146867014,0,0.276242966807689,0.229628896329213,0,0.655622074797121,0,0.308061348417659,0,0,0,0,0.170093705276516,0.215915916102139,1.54227252690289,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,3.19427136107939,0,0,0,0,0,0.096670718292122,0,0.307007349452259,0.551346289938122,0,0.145016693914229,1.10794615640931,5.51998621009772,0.165284915360978,0.576570202095319,0,0.6069466851333,0,0,0,0,0,0,0,0,1.116475108079,1.58189712359363,2.47819252100972,0,1.71175595213568,0,0,1.2591072030832,0.823611089208164,0.589062011728432,0,0,0,0.48763373908959,0,0,0.545999645631943,0,0,0,0,0,0,0,0,0,0,0.286822704408103,1.27723753317057,0,0,0,0,1.51789269506286,0,0.0962221127255121,0.670302275535787,0,2.35359501941948,1.29151611801369,1.68471475667626,3.99087138183008,3.67557440331135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.568272293612826,107.196273647223,62.0656182940215,50.6815158463733,0,0.140669416410513,0,0,0.844501632511974,0.996239941255349,0,0.755798243562828,0,0,0,0,0,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0,0,0.438770794307945,0,0,0.461701551022782,0,3.91958637459702,0,0,122.496445337057,6.41183153813036,128.99441579651,0,0,0,0,0,0,0,0,0,0,2.54435528581093,0,0,0,0,0,0,0,0.134802265961354,56.1804353109152,0,0,0,0,0,10.8891644443797,0.61214552326098,1.26373159256976,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.0969890164884194,0,14.9147288915151,0,0,0,0,0,0,3.9961921916426,0,0,28.6563646429481,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,1.19807400299395,1.71690419254628,0,6.6511637761859,0,0,33.9555515744134,35.6036508206639,32.2862975061546,8.95690081784214,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.315222829196793,3.88163952198986,0,0,0,2.85878130549347,0.662091970365432,0,0,0,0,0,0,0,0.453248366080503,0,84.8044089038216,0,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0.249960815924213,0,0,0,0,0.28984205722165,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00013882331577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,1.24415452006595,0,0,0,0.54604819096007,0,0,0,0.558644917973244,0,0,0,1.05802783107205,0,0.128458450192919,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,2.18807844327902,1.12815492523886,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,1.09394961803644,0,0,0,0,0,0,0,0.227662191351298,23.5948304632619,0,0,0.0679697329768317,0,0,0,0.156986185701028,0,4.76462677633441,2.73947616152849,0,0,2.21577286947635,0,0,21.0368509486121,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0.647428837187895,0.513314034281235,69.5888658802919,2.4285549652957,0,10.3454403083911,0.118920090777569,0,0,0,0,8.74238242015829,0,0.245148321753905,0,0.196308467114945,0.297046400327086,1.6906229103336,0,0.0939839179798536,0.580120991762195,0,0.178553938605658,0,0,5.11235471772562,0,0.430018749454354,0.473314686579554,0.135982980381829,0.436350690340377,4.7612415646386,0,0,0.432626562123789,0,0,0,0,0,0,0,0.757786982182394,0.535928260312357,0,0,0.213233981900981,32.8528915419962,0.193766729508018,1.11734485732544,0,0.0636471582781649,10.5100938258274,0.653150243690884,149.213719273183,0.134704106029175,0.358611026963382,15.3023764011166,0.976839223331694,0,0,1.70667884002515,49.2745979047254,0.244482888365733,8.54481974463051,0,0.805095174364105,0 | |phase1_expression=0.363356758541113,0.214100523890983,0,0,1.34088328328186,0,0,0,0,0.491467873003018,0,28.1789370047922,38.2462118431258,0.37129905888014,0.662794751455832,0,0,0,0,0,0.408001382488506,1.25381888591235,0,0,0.125542639594803,0,0,0,0,0,1.39334510984468,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144846518960824,0,2.43317435151318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.550236083880135,0,0.258416759169329,0,0,0,0,0,0,1.62028389576352,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.560677600142307,0,0.24666754841716,0,0,0,1.66493170409425,7.49028701823999,0.468642863667593,0,0,0.149448680551801,0,0,0,0,0.122834317311768,0,0,1.48360157567134,0,0,0.336672227908132,0.375355559615893,0,0.438977620880838,0,0.751190294532984,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97529702878181,0.10366105501537,0.252320850875628,0,0,0,0,1.85747171212792,0,0,0,0,0,0,0,0,0,0,0.738155454624648,0,0,2.94017422771084,0,0,0,0,15.8655085720616,0,0,0,0,0.555530670951178,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.1798003441664,0.1466765716419,0,0,0,0.531876233169741,0,0.257207374262142,0,0.532844358032199,1.57275793023962,33.6425395342695,0.823240336780769,0,0.355391948742546,0.791951872933429,0,0,0,0,0,0,0,0,0,0.144781306667579,2.05476322550383,0,0,0,0,0,0,0,0,0,0,0,0,0,2.33113834266366,1.50051156317903,0.542530047399471,1.24782516918484,0.892144943985809,0.630809660135739,0.702848489956279,0,0,3.10419213877515,0,0.553107505625109,0,19.1885134313486,39.1183503144376,0,0,0,10.0032098577266,26.6296703216795,110.977237651993,0,0,0,0,0,0.321707842287215,0,0,0,0,0,0,18.7332146867014,0,0.276242966807689,0.229628896329213,0,0.655622074797121,0,0.308061348417659,0,0,0,0,0.170093705276516,0.215915916102139,1.54227252690289,0,0,0,0,0,0.219259876645935,0.261435451024901,0,0,0,3.19427136107939,0,0,0,0,0,0.096670718292122,0,0.307007349452259,0.551346289938122,0,0.145016693914229,1.10794615640931,5.51998621009772,0.165284915360978,0.576570202095319,0,0.6069466851333,0,0,0,0,0,0,0,0,1.116475108079,1.58189712359363,2.47819252100972,0,1.71175595213568,0,0,1.2591072030832,0.823611089208164,0.589062011728432,0,0,0,0.48763373908959,0,0,0.545999645631943,0,0,0,0,0,0,0,0,0,0,0.286822704408103,1.27723753317057,0,0,0,0,1.51789269506286,0,0.0962221127255121,0.670302275535787,0,2.35359501941948,1.29151611801369,1.68471475667626,3.99087138183008,3.67557440331135,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0.568272293612826,107.196273647223,62.0656182940215,50.6815158463733,0,0.140669416410513,0,0,0.844501632511974,0.996239941255349,0,0.755798243562828,0,0,0,0,0,0,0.295930216910801,0,0,0,0.185536196323703,0,0,0,0.724999575434793,0.1137934482855,0,0,0,0,0,0,0.120596438625408,0,0,0,0.438770794307945,0,0,0.461701551022782,0,3.91958637459702,0,0,122.496445337057,6.41183153813036,128.99441579651,0,0,0,0,0,0,0,0,0,0,2.54435528581093,0,0,0,0,0,0,0,0.134802265961354,56.1804353109152,0,0,0,0,0,10.8891644443797,0.61214552326098,1.26373159256976,0,0,0,0.330991955875499,0,0,0,0,0,0,0,0.873633341210151,0,0,0,0,0.0969890164884194,0,14.9147288915151,0,0,0,0,0,0,3.9961921916426,0,0,28.6563646429481,0,0,0,0,0,0,0,0,0,0,0,0,0.558564802544508,0.229160424011684,0,1.19807400299395,1.71690419254628,0,6.6511637761859,0,0,33.9555515744134,35.6036508206639,32.2862975061546,8.95690081784214,0,0,0,0,0,0,0,0,0.0607495566580247,0,0.315222829196793,3.88163952198986,0,0,0,2.85878130549347,0.662091970365432,0,0,0,0,0,0,0,0.453248366080503,0,84.8044089038216,0,0,0,0,0,0,0,0,0,0,0,0,0.5013797880454,0,0,0,0,0,0,0,0.110929051536852,0.18628920882415,0,0.249960815924213,0,0,0,0,0.28984205722165,0,0,0,0,0.251567901752575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.00013882331577,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,1.24415452006595,0,0,0,0.54604819096007,0,0,0,0.558644917973244,0,0,0,1.05802783107205,0,0.128458450192919,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,2.18807844327902,1.12815492523886,0,0,0,0,0.147856086217045,0,0,0,0.0634158101939068,1.09394961803644,0,0,0,0,0,0,0,0.227662191351298,23.5948304632619,0,0,0.0679697329768317,0,0,0,0.156986185701028,0,4.76462677633441,2.73947616152849,0,0,2.21577286947635,0,0,21.0368509486121,0.801711364730253,0,0,0,0,0,0,0,0,0,0,0,0,0.365753774946808,0.647428837187895,0.513314034281235,69.5888658802919,2.4285549652957,0,10.3454403083911,0.118920090777569,0,0,0,0,8.74238242015829,0,0.245148321753905,0,0.196308467114945,0.297046400327086,1.6906229103336,0,0.0939839179798536,0.580120991762195,0,0.178553938605658,0,0,5.11235471772562,0,0.430018749454354,0.473314686579554,0.135982980381829,0.436350690340377,4.7612415646386,0,0,0.432626562123789,0,0,0,0,0,0,0,0.757786982182394,0.535928260312357,0,0,0.213233981900981,32.8528915419962,0.193766729508018,1.11734485732544,0,0.0636471582781649,10.5100938258274,0.653150243690884,149.213719273183,0.134704106029175,0.358611026963382,15.3023764011166,0.976839223331694,0,0,1.70667884002515,49.2745979047254,0.244482888365733,8.54481974463051,0,0.805095174364105,0 | ||
|short_description=p2@BC017277 | |short_description=p2@BC017277 | ||
}} | }} |
Revision as of 00:37, 19 November 2012
Short description: | p2@BC017277 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_2_at_BC017277_5end |
Coexpression cluster: | C172_chorionic_skeletal_tongue_amniotic_liver_gastrointestinal_Pericytes |
Association with transcript: | -28bp_to_BC017277_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
extraembryonic cell | 1.33e-16 | 19 |
transitional epithelial cell | 9.43e-09 | 4 |
urothelial cell | 9.43e-09 | 4 |
chorionic membrane mesenchymal stem cell | 2.52e-08 | 3 |
placental epithelial cell | 3.50e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.13e-23 | 14 |
membranous layer | 1.13e-23 | 14 |
extraembryonic structure | 2.49e-17 | 24 |
chorion | 5.86e-17 | 7 |
placenta | 2.52e-10 | 4 |
allantois | 2.52e-10 | 4 |
brain vasculature | 2.55e-10 | 5 |
amnion | 4.62e-09 | 7 |
egg chorion | 2.52e-08 | 3 |
somatic layer of lateral plate mesoderm | 7.43e-08 | 8 |
urothelium | 5.37e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.