FFCP PHASE1:Hg19::chr2:238275490..238275526,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000055!2.48e-33!180;CL:0000057!2.02e-28!75;CL:0000048!5.93e-15!430;CL:0000723!5.00e-14!436;CL:0000034!7.51e-13!444;CL:0002620!4.07e-12!23;CL:0000680!2.93e-11!57;CL:0000056!2.93e-11!57;CL:0000355!2.93e-11!57;CL:0000187!2.70e-10!54;CL:0000183!3.21e-10!59;CL:0002320!8.82e-10!365;CL:0002371!3.93e-08!591;CL:0000393!4.08e-08!60;CL:0000211!4.08e-08!60;CL:0002570!4.28e-08!8;CL:0000134!1.33e-07!358 | |ontology_enrichment_celltype=CL:0000055!2.48e-33!180;CL:0000057!2.02e-28!75;CL:0000048!5.93e-15!430;CL:0000723!5.00e-14!436;CL:0000034!7.51e-13!444;CL:0002620!4.07e-12!23;CL:0000680!2.93e-11!57;CL:0000056!2.93e-11!57;CL:0000355!2.93e-11!57;CL:0000187!2.70e-10!54;CL:0000183!3.21e-10!59;CL:0002320!8.82e-10!365;CL:0002371!3.93e-08!591;CL:0000393!4.08e-08!60;CL:0000211!4.08e-08!60;CL:0002570!4.28e-08!8;CL:0000134!1.33e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000723;6.30e-15;61!CL:0000134;1.28e-12;55!CL:0002620;1.35e-12;23!CL:0000048;3.85e-12;58!CL:0002570;2.32e-11;8!CL:0000057;5.23e-10;73!CL:0002320;1.14e-09;188!CL:0000034;1.62e-09;69!CL:0000499;6.23e-09;28!CL:0000188;7.48e-08;9!CL:0002540;9.32e-08;6 | |ontology_enrichment_celltype_v019=CL:0000723;6.30e-15;61!CL:0000134;1.28e-12;55!CL:0002620;1.35e-12;23!CL:0000048;3.85e-12;58!CL:0002570;2.32e-11;8!CL:0000057;5.23e-10;73!CL:0002320;1.14e-09;188!CL:0000034;1.62e-09;69!CL:0000499;6.23e-09;28!CL:0000188;7.48e-08;9!CL:0002540;9.32e-08;6 | ||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.20e-25,76;CL:0000048,5.07e-19,427;CL:0000723,2.83e-18,433;CL:0000034,2.59e-17,441;CL:0002320,7.13e-17,361;CL:0000134,3.21e-13,354;CL:0002620,1.76e-12,23;CL:0002570,2.15e-11,8;CL:0000219,1.33e-10,386;CL:0000499,7.23e-09,28;CL:0000188,5.30e-08,9;CL:0002540,6.21e-08,6;CL:0000153,9.63e-07,9;CL:0000447,9.63e-07,9 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:17;4.89e-07;5!DOID:450;4.89e-07;5!DOID:66;4.89e-07;5!DOID:423;4.89e-07;5!DOID:0080000;4.89e-07;5!DOID:11722;4.89e-07;5 | |ontology_enrichment_disease_v019=DOID:17;4.89e-07;5!DOID:450;4.89e-07;5!DOID:66;4.89e-07;5!DOID:423;4.89e-07;5!DOID:0080000;4.89e-07;5!DOID:11722;4.89e-07;5 | ||
|ontology_enrichment_disease_v019_2=DOID:17,3.68e-07,5;DOID:450,3.68e-07,5;DOID:66,3.68e-07,5;DOID:423,3.68e-07,5;DOID:0080000,3.68e-07,5;DOID:11722,3.68e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0000914!1.19e-14!83;UBERON:0002329!1.19e-14!83;UBERON:0003077!1.19e-14!83;UBERON:0003059!1.19e-14!83;UBERON:0007282!1.19e-14!83;UBERON:0009618!1.19e-14!83;UBERON:0007285!1.19e-14!83;UBERON:0004290!6.28e-13!70;UBERON:0003102!2.28e-11!95;UBERON:0002385!5.61e-11!63;UBERON:0001015!5.61e-11!63;UBERON:0000383!5.61e-11!63;UBERON:0002199!1.20e-10!45;UBERON:0002416!1.20e-10!45;UBERON:0001134!1.74e-10!61;UBERON:0002036!1.74e-10!61;UBERON:0003082!1.74e-10!61;UBERON:0005256!2.63e-10!143;UBERON:0000486!2.92e-10!82;UBERON:0002384!3.10e-10!375;UBERON:0002097!1.04e-08!40;UBERON:0001013!6.90e-08!14 | |ontology_enrichment_uberon=UBERON:0000914!1.19e-14!83;UBERON:0002329!1.19e-14!83;UBERON:0003077!1.19e-14!83;UBERON:0003059!1.19e-14!83;UBERON:0007282!1.19e-14!83;UBERON:0009618!1.19e-14!83;UBERON:0007285!1.19e-14!83;UBERON:0004290!6.28e-13!70;UBERON:0003102!2.28e-11!95;UBERON:0002385!5.61e-11!63;UBERON:0001015!5.61e-11!63;UBERON:0000383!5.61e-11!63;UBERON:0002199!1.20e-10!45;UBERON:0002416!1.20e-10!45;UBERON:0001134!1.74e-10!61;UBERON:0002036!1.74e-10!61;UBERON:0003082!1.74e-10!61;UBERON:0005256!2.63e-10!143;UBERON:0000486!2.92e-10!82;UBERON:0002384!3.10e-10!375;UBERON:0002097!1.04e-08!40;UBERON:0001013!6.90e-08!14 | ||
|ontology_enrichment_uberon_v019=UBERON:0002384;5.62e-10;198!UBERON:0001013;1.10e-08;14!UBERON:0002199;1.69e-08;46!UBERON:0002416;1.69e-08;46!UBERON:0002097;2.34e-08;41!UBERON:0004905;4.89e-08;8!UBERON:0000982;4.89e-08;8!UBERON:0004770;4.89e-08;8!UBERON:0002204;6.81e-08;70!UBERON:0011135;1.22e-07;5!UBERON:0002216;1.22e-07;5!UBERON:0011134;1.22e-07;5!UBERON:0002209;1.22e-07;5!UBERON:0002213;1.22e-07;5!UBERON:0007844;1.22e-07;5!UBERON:0011138;1.22e-07;5!UBERON:0001130;1.22e-07;5!UBERON:0001066;1.22e-07;5!UBERON:0001468;1.22e-07;5!UBERON:0003102;1.74e-07;50!UBERON:0001434;2.01e-07;36!UBERON:0000075;2.01e-07;16!UBERON:0001134;5.93e-07;16!UBERON:0002036;5.93e-07;16 | |ontology_enrichment_uberon_v019=UBERON:0002384;5.62e-10;198!UBERON:0001013;1.10e-08;14!UBERON:0002199;1.69e-08;46!UBERON:0002416;1.69e-08;46!UBERON:0002097;2.34e-08;41!UBERON:0004905;4.89e-08;8!UBERON:0000982;4.89e-08;8!UBERON:0004770;4.89e-08;8!UBERON:0002204;6.81e-08;70!UBERON:0011135;1.22e-07;5!UBERON:0002216;1.22e-07;5!UBERON:0011134;1.22e-07;5!UBERON:0002209;1.22e-07;5!UBERON:0002213;1.22e-07;5!UBERON:0007844;1.22e-07;5!UBERON:0011138;1.22e-07;5!UBERON:0001130;1.22e-07;5!UBERON:0001066;1.22e-07;5!UBERON:0001468;1.22e-07;5!UBERON:0003102;1.74e-07;50!UBERON:0001434;2.01e-07;36!UBERON:0000075;2.01e-07;16!UBERON:0001134;5.93e-07;16!UBERON:0002036;5.93e-07;16 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.16e-17,371;UBERON:0003102,5.76e-13,99;UBERON:0002199,8.90e-13,46;UBERON:0002416,8.90e-13,46;UBERON:0002097,6.81e-10,41;UBERON:0001013,7.43e-09,14;UBERON:0004905,5.09e-08,8;UBERON:0000982,5.09e-08,8;UBERON:0004770,5.09e-08,8;UBERON:0007524,1.08e-07,73;UBERON:0011135,1.36e-07,5;UBERON:0002216,1.36e-07,5;UBERON:0011134,1.36e-07,5;UBERON:0002209,1.36e-07,5;UBERON:0002213,1.36e-07,5;UBERON:0005856,1.36e-07,5;UBERON:0005866,1.36e-07,5;UBERON:0005863,1.36e-07,5;UBERON:0007844,1.36e-07,5;UBERON:0011138,1.36e-07,5;UBERON:0001130,1.36e-07,5;UBERON:0001066,1.36e-07,5;UBERON:0001468,1.36e-07,5;UBERON:0000075,1.56e-07,16;UBERON:0002329,2.05e-07,71;UBERON:0003059,2.05e-07,71;UBERON:0007282,2.05e-07,71;UBERON:0004290,2.05e-07,71;UBERON:0009618,2.05e-07,71;UBERON:0003077,3.28e-07,72;UBERON:0007285,3.28e-07,72 | |||
|phase1_expression=1.2717486548939,6.20891519283851,0.281908808191942,0,0.893922188854576,0.872338524100369,0,1.89515962028049,3.65659879479774,0.245733936501509,0,0.655324116390517,0.263766978228454,2.35156070624089,2.31978163009541,2.01697543935533,0,0.730310090387373,0,0.123121058076788,0.204000691244253,0,0,0,0.251085279189606,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34140171940727,0.12786256184353,1.80719576192283,2.00535164254356,3.33146993609895,3.9764297352555,5.83961844363163,0,0.221729397462564,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.24406205754817,0,0,0,0,0,0,0,0,0,0,0,1.98788780678127,1.64619665163954,0.529636723252875,9.17877186396204,1.77334191099179,1.12135520028461,1.06748995729705,1.48000529050296,0.622422070799533,0.808264032418128,0.490385709340376,1.96764655938411,4.60940739583999,0.468642863667593,1.24864030732128,0,5.08125513876124,0.587172493218824,1.61872944368132,0.561803226808994,1.63323337003915,1.71968044236475,2.9964476540972,1.18800285728205,3.95627086845691,0,0,1.5150250255866,1.12606667884768,0,1.75591048352335,1.83892677479412,1.20190447125277,0.340296549480063,5.56107870635472,3.63047560991565,1.69545520927649,6.30191301777245,1.44273540933814,4.12224864073007,2.23340227597908,2.53164498361899,1.16924406193438,4.79624171063818,1.19664868234989,0.80823028409406,6.74518225781567,1.10827308050404,0.847802961552438,0,0,0,0,0,0,0,0,0,3.12899064659632,12.2215778256648,0,2.3218396401599,2.16563844500876,0,0,0,0,0,0,0,0,0,0,0,0.4115740113314,0,0,0,0.590789906681404,0,0,0,0,0,0,0,1.62904152655162,2.07986957055916,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12624243342638,0,0,0,0,0.514137463516618,0,0,0.224262168690721,2.1798003441664,0.8800594298514,0.775630294546667,3.57656445851882,4.22651376278,0.531876233169741,0,1.54324424557285,1.41849132023278,1.8649552531127,2.14466990487221,2.17048642156577,2.46972101034231,2.28015329005615,2.48774364119782,2.37585561880029,0,0,0.099972991182057,0,0,0,0.239624855491583,2.29723871668228,0,1.15825045334063,1.2328579353023,0.179060963239896,0,0,0,0,0,1.30139853857622,0,0,0,0,0,0,3.55805325985506,6.5022167737758,4.06897535549603,0.831883446123229,1.60586089917446,0.630809660135739,1.52283839490527,0.601892199455438,2.27407504055985,1.03473071292505,0.664225598535437,1.65932251687533,1.21637060255316,2.34961388955289,4.46086450954113,0,0,0,0,0,0,0.248107807818777,0.920771839728375,4.49056151092918,0.512556597022804,1.02341449813341,1.76939313257968,0,4.00945203886904,4.6166048581413,0.821271560138091,3.11552657510173,3.02146983995894,0,0,0,2.52591785962135,6.73737321624853,6.29397191805236,0,0.0770153371044148,0,0,0.211103257785751,0,0,0,1.54227252690289,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0.650060246036521,1.6068392984416,1.25671933779759,1.69453478826109,2.76306614507033,1.65403886981437,2.47066563197029,4.35050081742686,1.44885266607372,2.1367688555217,0,0,0,0,0.464845549297286,7.870308670766,1.3940745403212,0.616067160352178,0,0.869932992075073,0.18532421910392,0,1.48863347743867,0.316379424718726,0,0.255897791311334,4.2793898803392,0,0,0.719489830333259,0.274537029736055,0.824686816419805,0,0,0.421258456238981,2.92580243453754,1.46228093778771,1.05650146756755,1.09199929126389,8.62573134917648,0,0,0.66343897524122,0,1.15755106853338,3.27947376023316,0.405820753925408,0.30982349809975,1.12678241012897,0.286822704408103,0.196498082026242,0.35667105148125,0.709522128141196,2.11107635297664,1.64647446479951,0.379473173765715,1.39973888097993,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.439524537815682,0,0,0,0.23874448473769,0,0,0,0,0,0.16480387422676,0,0.796991953004279,0,0,0,0,2.17727711363265,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0,0,0.31900115973192,1.00757352742049,1.06606955203727,0,0,0,0,0,0,0,0,0,0,0,0,0.995261931078505,0.0884575645033392,0,0,0,0,0,1.60515529459758,0,0,0,0,0,0,0.30607276163049,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0.698906672968121,0.687944129886466,0,0,0,0,0,0.225980740780532,0.685209623233754,0,0,0,0,0.85381197895741,0,0,0,0,0,0,0,0,0,1.52997326454483,0.288950589901519,0,0,0,0,0,0.558564802544508,0,0,0.798716001995964,0.429226048136571,0,0.134366944973453,1.08089965062721,0,0,0,0,0,0.0846733320657845,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,2.71499800876856,0.864221491201268,6.53174720218818,0,0,0.511164065356265,0,0,0,0,0,0,0,0.106787412567695,0.157204305099666,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.2937214757744,0,0,3.88062487505873,6.31025936587506,2.77402930751307,4.16686611605196,9.0564444630927,3.55924488638614,0.457680136793847,3.32708032279126,1.39893480524502,1.33069634990671,1.43367090447332,0,1.70789252563885,4.97647449409027,3.45594228925393,2.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| ||
|short_description=p@chr2:238275490..238275526,- | |short_description=p@chr2:238275490..238275526,- | ||
}} | }} |
Revision as of 06:50, 19 November 2012
Short description: | p@chr2:238275490..238275526, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:238275490..238275526, - |
Coexpression cluster: | C332_Fibroblast_Smooth_Mesenchymal_mesenchymal_Chondrocyte_Skeletal_Pericytes |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.20e-25 | 76 |
multi fate stem cell | 5.07e-19 | 427 |
somatic stem cell | 2.83e-18 | 433 |
stem cell | 2.59e-17 | 441 |
connective tissue cell | 7.13e-17 | 361 |
mesenchymal cell | 3.21e-13 | 354 |
skin fibroblast | 1.76e-12 | 23 |
mesenchymal stem cell of adipose | 2.15e-11 | 8 |
motile cell | 1.33e-10 | 386 |
stromal cell | 7.23e-09 | 28 |
cell of skeletal muscle | 5.30e-08 | 9 |
mesenchymal stem cell of the bone marrow | 6.21e-08 | 6 |
GAG secreting cell | 9.63e-07 | 9 |
carbohydrate secreting cell | 9.63e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.16e-17 | 371 |
surface structure | 5.76e-13 | 99 |
integument | 8.90e-13 | 46 |
integumental system | 8.90e-13 | 46 |
skin of body | 6.81e-10 | 41 |
adipose tissue | 7.43e-09 | 14 |
articulation | 5.09e-08 | 8 |
skeletal joint | 5.09e-08 | 8 |
articular system | 5.09e-08 | 8 |
dense mesenchyme tissue | 1.08e-07 | 73 |
intervertebral cartilage | 1.36e-07 | 5 |
symphysis | 1.36e-07 | 5 |
nonsynovial joint | 1.36e-07 | 5 |
fibrous joint | 1.36e-07 | 5 |
cartilaginous joint | 1.36e-07 | 5 |
developing mesenchymal condensation | 1.36e-07 | 5 |
pre-cartilage condensation | 1.36e-07 | 5 |
cartilaginous condensation | 1.36e-07 | 5 |
cartilage element | 1.36e-07 | 5 |
post-cranial axial skeletal system | 1.36e-07 | 5 |
vertebral column | 1.36e-07 | 5 |
intervertebral disk | 1.36e-07 | 5 |
intervertebral joint | 1.36e-07 | 5 |
subdivision of skeletal system | 1.56e-07 | 16 |
somite | 2.05e-07 | 71 |
presomitic mesoderm | 2.05e-07 | 71 |
presumptive segmental plate | 2.05e-07 | 71 |
dermomyotome | 2.05e-07 | 71 |
trunk paraxial mesoderm | 2.05e-07 | 71 |
paraxial mesoderm | 3.28e-07 | 72 |
presumptive paraxial mesoderm | 3.28e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 3.68e-07 | 5 |
myotonic disease | 3.68e-07 | 5 |
muscle tissue disease | 3.68e-07 | 5 |
myopathy | 3.68e-07 | 5 |
muscular disease | 3.68e-07 | 5 |
myotonic dystrophy | 3.68e-07 | 5 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.