FFCP PHASE1:Hg19::chr17:39775857..39775872,-: Difference between revisions
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|ontology_enrichment_celltype=CL:0000066!1.41e-23!254;CL:0002076!1.75e-21!43;CL:0002159!1.88e-16!13;CL:0000223!3.35e-14!59;CL:0002368!9.19e-14!13;CL:0000244!2.55e-12!4;CL:0000731!2.55e-12!4;CL:0002251!7.81e-11!21;CL:0002328!6.91e-10!3;CL:0002166!1.09e-08!3;CL:0000240!2.88e-08!6;CL:0000311!2.88e-08!6;CL:0000079!2.88e-08!6;CL:0000237!2.88e-08!6;CL:0000036!2.88e-08!6;CL:0000357!2.88e-08!6;CL:0000114!2.88e-08!6;CL:0002327!4.63e-07!4;CL:0000575!7.41e-07!2;CL:0002077!8.46e-07!33 | |ontology_enrichment_celltype=CL:0000066!1.41e-23!254;CL:0002076!1.75e-21!43;CL:0002159!1.88e-16!13;CL:0000223!3.35e-14!59;CL:0002368!9.19e-14!13;CL:0000244!2.55e-12!4;CL:0000731!2.55e-12!4;CL:0002251!7.81e-11!21;CL:0002328!6.91e-10!3;CL:0002166!1.09e-08!3;CL:0000240!2.88e-08!6;CL:0000311!2.88e-08!6;CL:0000079!2.88e-08!6;CL:0000237!2.88e-08!6;CL:0000036!2.88e-08!6;CL:0000357!2.88e-08!6;CL:0000114!2.88e-08!6;CL:0002327!4.63e-07!4;CL:0000575!7.41e-07!2;CL:0002077!8.46e-07!33 | ||
|ontology_enrichment_celltype_v019=CL:0000244;1.74e-25;4!CL:0000731;1.74e-25;4!CL:0002368;4.09e-21;13!CL:0000312;1.57e-20;5!CL:0000240;3.22e-17;6!CL:0000311;3.22e-17;6!CL:0000079;3.22e-17;6!CL:0000237;3.22e-17;6!CL:0002231;2.72e-16;3!CL:0002328;7.82e-16;3!CL:0002159;6.96e-13;14!CL:0000362;1.11e-11;9!CL:0002076;1.71e-10;42!CL:0002077;2.22e-07;34!CL:0000575;8.76e-07;2 | |ontology_enrichment_celltype_v019=CL:0000244;1.74e-25;4!CL:0000731;1.74e-25;4!CL:0002368;4.09e-21;13!CL:0000312;1.57e-20;5!CL:0000240;3.22e-17;6!CL:0000311;3.22e-17;6!CL:0000079;3.22e-17;6!CL:0000237;3.22e-17;6!CL:0002231;2.72e-16;3!CL:0002328;7.82e-16;3!CL:0002159;6.96e-13;14!CL:0000362;1.11e-11;9!CL:0002076;1.71e-10;42!CL:0002077;2.22e-07;34!CL:0000575;8.76e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000244,1.20e-25,4;CL:0000731,1.20e-25,4;CL:0002368,4.75e-21,13;CL:0000312,2.13e-20,5;CL:0000240,4.14e-17,6;CL:0000311,4.14e-17,6;CL:0000079,4.14e-17,6;CL:0000237,4.14e-17,6;CL:0000036,4.14e-17,6;CL:0000357,4.14e-17,6;CL:0000114,4.14e-17,6;CL:0002231,2.73e-16,3;CL:0002328,1.06e-15,3;CL:0002159,6.76e-13,14;CL:0002076,2.42e-12,42;CL:0000362,1.31e-11,9;CL:0000066,1.93e-10,253;CL:0000223,9.29e-09,58;CL:0002077,4.61e-08,34;CL:0000575,6.42e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000357;3.22e-17;6!CL:0000114;3.22e-17;6 | |ontology_enrichment_development_v019=CL:0000357;3.22e-17;6!CL:0000114;3.22e-17;6 | ||
|ontology_enrichment_disease=DOID:1749!1.64e-08!14;DOID:305!2.71e-07!106 | |ontology_enrichment_disease=DOID:1749!1.64e-08!14;DOID:305!2.71e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:3151;1.05e-12;1!DOID:3149;1.05e-12;1!DOID:3451;5.57e-07;2!DOID:4159;5.57e-07;2!DOID:0060122;5.57e-07;2 | |ontology_enrichment_disease_v019=DOID:3151;1.05e-12;1!DOID:3149;1.05e-12;1!DOID:3451;5.57e-07;2!DOID:4159;5.57e-07;2!DOID:0060122;5.57e-07;2 | ||
|ontology_enrichment_disease_v019_2=DOID:3151,1.25e-12,1;DOID:3149,1.25e-12,1;DOID:3451,6.07e-07,2;DOID:4159,6.07e-07,2;DOID:0060122,6.07e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001737!2.94e-22!9;UBERON:0001004!4.88e-19!72;UBERON:0000065!6.46e-16!53;UBERON:0004119!7.28e-16!169;UBERON:0000925!7.28e-16!169;UBERON:0006595!7.28e-16!169;UBERON:0001557!1.54e-14!19;UBERON:0000072!2.44e-11!46;UBERON:0008947!6.11e-11!38;UBERON:0003258!6.11e-11!38;UBERON:0004815!6.91e-10!3;UBERON:0002031!6.91e-10!3;UBERON:0000365!7.57e-10!5;UBERON:0005910!3.40e-08!6;UBERON:0001007!5.67e-08!155;UBERON:0001555!5.67e-08!155;UBERON:0007026!5.67e-08!155;UBERON:0000077!1.11e-07!130;UBERON:0002185!1.71e-07!4;UBERON:0001911!4.63e-07!4;UBERON:0005333!4.63e-07!4;UBERON:0008425!4.63e-07!4;UBERON:0005311!4.63e-07!4 | |ontology_enrichment_uberon=UBERON:0001737!2.94e-22!9;UBERON:0001004!4.88e-19!72;UBERON:0000065!6.46e-16!53;UBERON:0004119!7.28e-16!169;UBERON:0000925!7.28e-16!169;UBERON:0006595!7.28e-16!169;UBERON:0001557!1.54e-14!19;UBERON:0000072!2.44e-11!46;UBERON:0008947!6.11e-11!38;UBERON:0003258!6.11e-11!38;UBERON:0004815!6.91e-10!3;UBERON:0002031!6.91e-10!3;UBERON:0000365!7.57e-10!5;UBERON:0005910!3.40e-08!6;UBERON:0001007!5.67e-08!155;UBERON:0001555!5.67e-08!155;UBERON:0007026!5.67e-08!155;UBERON:0000077!1.11e-07!130;UBERON:0002185!1.71e-07!4;UBERON:0001911!4.63e-07!4;UBERON:0005333!4.63e-07!4;UBERON:0008425!4.63e-07!4;UBERON:0005311!4.63e-07!4 | ||
|ontology_enrichment_uberon_v019=UBERON:0000365;1.57e-20;5!UBERON:0005910;3.22e-17;6!UBERON:0004815;7.82e-16;3!UBERON:0002031;7.82e-16;3!UBERON:0002185;7.11e-10;5!UBERON:0000486;6.78e-09;12!UBERON:0000485;2.69e-07;7!UBERON:0001003;3.25e-07;15!UBERON:0007376;3.25e-07;15!UBERON:0005911;6.81e-07;36 | |ontology_enrichment_uberon_v019=UBERON:0000365;1.57e-20;5!UBERON:0005910;3.22e-17;6!UBERON:0004815;7.82e-16;3!UBERON:0002031;7.82e-16;3!UBERON:0002185;7.11e-10;5!UBERON:0000486;6.78e-09;12!UBERON:0000485;2.69e-07;7!UBERON:0001003;3.25e-07;15!UBERON:0007376;3.25e-07;15!UBERON:0005911;6.81e-07;36 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000365,1.17e-20,5;UBERON:0005910,2.51e-17,6;UBERON:0004815,1.06e-15,3;UBERON:0002031,1.06e-15,3;UBERON:0002185,8.49e-10,5;UBERON:0006554,3.27e-08,47;UBERON:0005157,3.45e-08,47;UBERON:0001008,4.94e-08,48;UBERON:0005153,1.82e-07,37;UBERON:0001003,3.58e-07,15;UBERON:0007376,3.58e-07,15;UBERON:0007383,3.58e-07,15;UBERON:0004119,8.40e-07,160;UBERON:0000925,8.40e-07,160;UBERON:0006595,8.40e-07,160 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,0.90361775633475,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0.220587945464788,0.435758888184812,0.949082476444386,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,2.08525542276389,1.1240175325762,1.3068766413512,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0.283550194484773,0.895585227028483,0.290633938513962,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21251028578504,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0101294060657,5.70902131402557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.826424576804891,1.34533047155574,1.14851441245126,1.4162089319777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962221127255121,0,0,0,1.29151611801369,1.68471475667626,2.66058092122005,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0.0870592065804026,0,0,0.290268993867255,0,0.0821154570532092,0,0,0,0,0,0,0,0.160317640503067,0,0.19980960958213,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0126081255956,0,0,0,0,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,1.67855409263333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.550285795565037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.828864656652147,0.51215543128185,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71421575442263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.870866991587845,0,0,0,0,0,0,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.75826367343678,0.90361775633475,1.10926203050036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199463657621632,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.364295288292542,1.85392221392215,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.872188104285069,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0.286804595389004,0,0,0,0,0,0,0,0,0,0,0,0.236613600079688,0.337169380156203,0.241011029883482,0.220587945464788,0.435758888184812,0.949082476444386,0.134831308160164,0.196221465125346,0.38474715694639,0,0,0,0,0,0,0,0,0,0,2.08525542276389,1.1240175325762,1.3068766413512,0.462942225792648,0,0,0,0,0,0,0,0,0,0,0,0,0,0.93733833986777,0.16798212819886,0.283550194484773,0.895585227028483,0.290633938513962,1.15014803749563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.21251028578504,0,0.907170879989041,0,0,0,0,0,0,0,0,0,0,0,0,0,4.0101294060657,5.70902131402557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0,0,0,0,0,0,0,0,0.826424576804891,1.34533047155574,1.14851441245126,1.4162089319777,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.962221127255121,0,0,0,1.29151611801369,1.68471475667626,2.66058092122005,0.229723400206959,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71623345421307,0.296964680832639,0.307160702099232,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.969332746095218,0,0,0,0,0.724999575434793,0,0,0,0,0,0,0,0,0,0,0,0,0,0.697118721393016,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293977192243133,0.0870592065804026,0,0,0.290268993867255,0,0.0821154570532092,0,0,0,0,0,0,0,0.160317640503067,0,0.19980960958213,0,0,0,0,0,0.707082103850386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.0126081255956,0,0,0,0,0.767660789277781,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.211312123358627,0,0,0,0,0,1.67855409263333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0,0.550285795565037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255524855279191,0,0,0,0,0,0,0,0,0,0,0,0.078493092850514,0,0,0,0,0,0,0,0,0,0,0.828864656652147,0.51215543128185,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.71421575442263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0.870866991587845,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr17:39775857..39775872,- | |short_description=p@chr17:39775857..39775872,- | ||
}} | }} |
Revision as of 08:29, 19 November 2012
Short description: | p@chr17:39775857..39775872, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr17:39775857..39775872, - |
Coexpression cluster: | C544_nasal_Keratinocyte_Esophageal_Urothelial_Placental_Corneal_Prostate |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
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Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
transitional epithelial cell | 1.20e-25 | 4 |
urothelial cell | 1.20e-25 | 4 |
respiratory epithelial cell | 4.75e-21 | 13 |
keratinocyte | 2.13e-20 | 5 |
stratified squamous epithelial cell | 4.14e-17 | 6 |
keratin accumulating cell | 4.14e-17 | 6 |
stratified epithelial cell | 4.14e-17 | 6 |
keratinizing barrier epithelial cell | 4.14e-17 | 6 |
epithelial fate stem cell | 4.14e-17 | 6 |
stratified epithelial stem cell | 4.14e-17 | 6 |
surface ectodermal cell | 4.14e-17 | 6 |
epithelial cell of prostate | 2.73e-16 | 3 |
bronchial epithelial cell | 1.06e-15 | 3 |
general ecto-epithelial cell | 6.76e-13 | 14 |
endo-epithelial cell | 2.42e-12 | 42 |
epidermal cell | 1.31e-11 | 9 |
epithelial cell | 1.93e-10 | 253 |
endodermal cell | 9.29e-09 | 58 |
ecto-epithelial cell | 4.61e-08 | 34 |
corneal epithelial cell | 6.42e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
urothelium | 1.17e-20 | 5 |
transitional epithelium | 2.51e-17 | 6 |
lower respiratory tract epithelium | 1.06e-15 | 3 |
epithelium of bronchus | 1.06e-15 | 3 |
bronchus | 8.49e-10 | 5 |
urinary system structure | 3.27e-08 | 47 |
epithelial fold | 3.45e-08 | 47 |
renal system | 4.94e-08 | 48 |
epithelial bud | 1.82e-07 | 37 |
skin epidermis | 3.58e-07 | 15 |
outer epithelium | 3.58e-07 | 15 |
enveloping layer of ectoderm | 3.58e-07 | 15 |
endoderm-derived structure | 8.40e-07 | 160 |
endoderm | 8.40e-07 | 160 |
presumptive endoderm | 8.40e-07 | 160 |
Ontology term | p-value | n |
---|---|---|
skin squamous cell carcinoma | 1.25e-12 | 1 |
keratoacanthoma | 1.25e-12 | 1 |
skin carcinoma | 6.07e-07 | 2 |
skin cancer | 6.07e-07 | 2 |
integumentary system cancer | 6.07e-07 | 2 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.