FFCP PHASE1:Hg19::chr11:64949482..64949528,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002321!1.21e-20!248;CL:0000220!1.17e-19!246;CL:0000066!7.49e-19!254;CL:0002076!2.42e-11!43;CL:0000223!1.44e-09!59;CL:0000076!7.65e-08!62;CL:1000449!2.05e-07!16;CL:1000497!5.88e-07!18;CL:0002518!5.88e-07!18;CL:1000507!9.27e-07!12;CL:1000494!9.27e-07!12 | |ontology_enrichment_celltype=CL:0002321!1.21e-20!248;CL:0000220!1.17e-19!246;CL:0000066!7.49e-19!254;CL:0002076!2.42e-11!43;CL:0000223!1.44e-09!59;CL:0000076!7.65e-08!62;CL:1000449!2.05e-07!16;CL:1000497!5.88e-07!18;CL:0002518!5.88e-07!18;CL:1000507!9.27e-07!12;CL:1000494!9.27e-07!12 | ||
|ontology_enrichment_celltype_v019=CL:1000507;3.58e-15;10!CL:1000494;3.58e-15;10!CL:1000449;4.19e-15;15!CL:1000497;4.59e-13;17!CL:0002518;4.59e-13;17!CL:0002322;8.90e-13;5!CL:0002681;2.76e-12;12!CL:0002584;2.76e-12;12!CL:0002202;4.12e-10;9!CL:0002632;4.12e-10;9!CL:0002159;6.17e-10;14!CL:0002328;1.49e-08;3!CL:0002076;1.97e-08;42!CL:0002621;3.68e-08;3!CL:0002166;8.88e-08;3!CL:0002368;9.56e-07;13 | |ontology_enrichment_celltype_v019=CL:1000507;3.58e-15;10!CL:1000494;3.58e-15;10!CL:1000449;4.19e-15;15!CL:1000497;4.59e-13;17!CL:0002518;4.59e-13;17!CL:0002322;8.90e-13;5!CL:0002681;2.76e-12;12!CL:0002584;2.76e-12;12!CL:0002202;4.12e-10;9!CL:0002632;4.12e-10;9!CL:0002159;6.17e-10;14!CL:0002328;1.49e-08;3!CL:0002076;1.97e-08;42!CL:0002621;3.68e-08;3!CL:0002166;8.88e-08;3!CL:0002368;9.56e-07;13 | ||
|ontology_enrichment_celltype_v019_2=CL:0000066,4.03e-17,253;CL:1000507,2.15e-15,10;CL:1000494,2.15e-15,10;CL:1000449,4.06e-15,15;CL:1000497,4.46e-13,17;CL:0002518,4.46e-13,17;CL:0002322,8.07e-13,5;CL:0002681,2.87e-12,12;CL:0002584,2.87e-12,12;CL:0002321,5.23e-12,250;CL:0002076,6.60e-12,42;CL:0002159,4.15e-10,14;CL:0002202,4.34e-10,9;CL:0002632,4.34e-10,9;CL:0002328,1.08e-08,3;CL:0000223,1.41e-08,58;CL:0002166,5.54e-08,3;CL:0002621,7.99e-08,3;CL:0000076,2.43e-07,63;CL:0002368,9.89e-07,13 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:1749;4.96e-08;14 | |ontology_enrichment_disease_v019=DOID:1749;4.96e-08;14 | ||
|ontology_enrichment_disease_v019_2=DOID:1749,2.14e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0002100!8.45e-11!216;UBERON:0000483!1.09e-10!309;UBERON:0000119!1.10e-10!312;UBERON:0000475!3.38e-10!365;UBERON:0003103!9.84e-10!69;UBERON:0006554!5.60e-09!44;UBERON:0000481!8.24e-09!347;UBERON:0001008!1.66e-08!45;UBERON:0005256!2.55e-08!143;UBERON:0003914!3.74e-08!118;UBERON:0003064!4.90e-08!37;UBERON:0000080!4.96e-08!18;UBERON:0002120!4.96e-08!18;UBERON:0004875!4.96e-08!18;UBERON:0005721!4.96e-08!18;UBERON:0005754!4.96e-08!18;UBERON:0007297!4.96e-08!18;UBERON:0003104!6.11e-08!238;UBERON:0009142!6.11e-08!238;UBERON:0004111!6.72e-08!241;UBERON:0006555!9.14e-08!17;UBERON:0005103!9.14e-08!17;UBERON:0000083!9.14e-08!17;UBERON:0009201!9.14e-08!17;UBERON:0004819!9.14e-08!17;UBERON:0006553!9.14e-08!17;UBERON:0003074!9.14e-08!17;UBERON:0003060!9.14e-08!17;UBERON:0004211!2.05e-07!16;UBERON:0001285!2.05e-07!16;UBERON:0007684!2.05e-07!16;UBERON:0003220!2.05e-07!16;UBERON:0004208!2.05e-07!16;UBERON:0002113!2.31e-07!27;UBERON:0003918!2.31e-07!27;UBERON:0005095!2.31e-07!27;UBERON:0007687!2.31e-07!27;UBERON:0009569!3.03e-07!113;UBERON:0005177!7.86e-07!107;UBERON:0009773!9.27e-07!12;UBERON:0001231!9.27e-07!12;UBERON:0004810!9.27e-07!12 | |ontology_enrichment_uberon=UBERON:0002100!8.45e-11!216;UBERON:0000483!1.09e-10!309;UBERON:0000119!1.10e-10!312;UBERON:0000475!3.38e-10!365;UBERON:0003103!9.84e-10!69;UBERON:0006554!5.60e-09!44;UBERON:0000481!8.24e-09!347;UBERON:0001008!1.66e-08!45;UBERON:0005256!2.55e-08!143;UBERON:0003914!3.74e-08!118;UBERON:0003064!4.90e-08!37;UBERON:0000080!4.96e-08!18;UBERON:0002120!4.96e-08!18;UBERON:0004875!4.96e-08!18;UBERON:0005721!4.96e-08!18;UBERON:0005754!4.96e-08!18;UBERON:0007297!4.96e-08!18;UBERON:0003104!6.11e-08!238;UBERON:0009142!6.11e-08!238;UBERON:0004111!6.72e-08!241;UBERON:0006555!9.14e-08!17;UBERON:0005103!9.14e-08!17;UBERON:0000083!9.14e-08!17;UBERON:0009201!9.14e-08!17;UBERON:0004819!9.14e-08!17;UBERON:0006553!9.14e-08!17;UBERON:0003074!9.14e-08!17;UBERON:0003060!9.14e-08!17;UBERON:0004211!2.05e-07!16;UBERON:0001285!2.05e-07!16;UBERON:0007684!2.05e-07!16;UBERON:0003220!2.05e-07!16;UBERON:0004208!2.05e-07!16;UBERON:0002113!2.31e-07!27;UBERON:0003918!2.31e-07!27;UBERON:0005095!2.31e-07!27;UBERON:0007687!2.31e-07!27;UBERON:0009569!3.03e-07!113;UBERON:0005177!7.86e-07!107;UBERON:0009773!9.27e-07!12;UBERON:0001231!9.27e-07!12;UBERON:0004810!9.27e-07!12 | ||
|ontology_enrichment_uberon_v019=UBERON:0004211;3.58e-15;10!UBERON:0009773;3.58e-15;10!UBERON:0001231;3.58e-15;10!UBERON:0004810;3.58e-15;10!UBERON:0006555;4.19e-15;15!UBERON:0004819;4.19e-15;15!UBERON:0001285;4.19e-15;15!UBERON:0007684;4.19e-15;15!UBERON:0001225;2.76e-12;12!UBERON:0008987;2.76e-12;12!UBERON:0001851;5.54e-12;15!UBERON:0000353;1.57e-09;15!UBERON:0002113;1.26e-08;24!UBERON:0011143;1.26e-08;24!UBERON:0004815;1.49e-08;3!UBERON:0002031;1.49e-08;3!UBERON:0000489;3.16e-08;29!UBERON:0001949;3.68e-08;3!UBERON:0006554;7.11e-08;30!UBERON:0001008;7.11e-08;30!UBERON:0007196;9.35e-08;15!UBERON:0001558;9.35e-08;15 | |ontology_enrichment_uberon_v019=UBERON:0004211;3.58e-15;10!UBERON:0009773;3.58e-15;10!UBERON:0001231;3.58e-15;10!UBERON:0004810;3.58e-15;10!UBERON:0006555;4.19e-15;15!UBERON:0004819;4.19e-15;15!UBERON:0001285;4.19e-15;15!UBERON:0007684;4.19e-15;15!UBERON:0001225;2.76e-12;12!UBERON:0008987;2.76e-12;12!UBERON:0001851;5.54e-12;15!UBERON:0000353;1.57e-09;15!UBERON:0002113;1.26e-08;24!UBERON:0011143;1.26e-08;24!UBERON:0004815;1.49e-08;3!UBERON:0002031;1.49e-08;3!UBERON:0000489;3.16e-08;29!UBERON:0001949;3.68e-08;3!UBERON:0006554;7.11e-08;30!UBERON:0001008;7.11e-08;30!UBERON:0007196;9.35e-08;15!UBERON:0001558;9.35e-08;15 | ||
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| ||
|short_description=p8@CAPN1 | |short_description=p8@CAPN1 | ||
}} | }} |
Revision as of 19:54, 19 November 2012
Short description: | p8@CAPN1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_8_at_CAPN1_5end |
Coexpression cluster: | NA |
Association with transcript: | 11bp_to_ENST00000526954_5end |
EntrezGene: | CAPN1 |
HGNC: | 1476 |
UniProt: | E9PRM1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 4.03e-17 | 253 |
kidney tubule cell | 2.15e-15 | 10 |
nephron tubule epithelial cell | 2.15e-15 | 10 |
epithelial cell of nephron | 4.06e-15 | 15 |
kidney cell | 4.46e-13 | 17 |
kidney epithelial cell | 4.46e-13 | 17 |
embryonic stem cell | 8.07e-13 | 5 |
kidney cortical cell | 2.87e-12 | 12 |
renal cortical epithelial cell | 2.87e-12 | 12 |
embryonic cell | 5.23e-12 | 250 |
endo-epithelial cell | 6.60e-12 | 42 |
general ecto-epithelial cell | 4.15e-10 | 14 |
epithelial cell of tracheobronchial tree | 4.34e-10 | 9 |
epithelial cell of lower respiratory tract | 4.34e-10 | 9 |
bronchial epithelial cell | 1.08e-08 | 3 |
endodermal cell | 1.41e-08 | 58 |
epithelial cell of Malassez | 5.54e-08 | 3 |
gingival epithelial cell | 7.99e-08 | 3 |
squamous epithelial cell | 2.43e-07 | 63 |
respiratory epithelial cell | 9.89e-07 | 13 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 2.15e-15 | 10 |
nephron epithelium | 4.06e-15 | 15 |
renal tubule | 4.06e-15 | 15 |
nephron tubule | 4.06e-15 | 15 |
nephron | 4.06e-15 | 15 |
uriniferous tubule | 4.06e-15 | 15 |
nephrogenic mesenchyme | 4.06e-15 | 15 |
excretory tube | 4.93e-14 | 16 |
kidney epithelium | 4.93e-14 | 16 |
cortex of kidney | 2.87e-12 | 12 |
renal parenchyma | 2.87e-12 | 12 |
cortex | 5.22e-12 | 15 |
protuberance | 4.80e-10 | 6 |
pharyngeal arch | 4.80e-10 | 6 |
embryonic head | 4.80e-10 | 6 |
parenchyma | 1.62e-09 | 15 |
compound organ | 1.68e-09 | 68 |
lower respiratory tract epithelium | 1.08e-08 | 3 |
epithelium of bronchus | 1.08e-08 | 3 |
heart blood vessel | 2.83e-08 | 5 |
coronary vessel | 2.83e-08 | 5 |
gingival epithelium | 7.99e-08 | 3 |
kidney | 8.25e-08 | 26 |
kidney mesenchyme | 8.25e-08 | 26 |
upper urinary tract | 8.25e-08 | 26 |
kidney rudiment | 8.25e-08 | 26 |
kidney field | 8.25e-08 | 26 |
tracheobronchial tree | 9.81e-08 | 15 |
lower respiratory tract | 9.81e-08 | 15 |
cavitated compound organ | 1.59e-07 | 31 |
respiratory system epithelium | 5.94e-07 | 28 |
simple columnar epithelium | 6.23e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 2.14e-08 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.