FFCP PHASE1:Hg19::chr22:30901648..30901705,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
Line 9: | Line 9: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000039;2.09e-09;7!CL:0000586;2.09e-09;7!CL:0000764;4.88e-07;2!CL:0000558;4.88e-07;2 | |ontology_enrichment_celltype_v019=CL:0000039;2.09e-09;7!CL:0000586;2.09e-09;7!CL:0000764;4.88e-07;2!CL:0000558;4.88e-07;2 | ||
|ontology_enrichment_celltype_v019_2=CL:0000039,2.86e-09,7;CL:0000586,2.86e-09,7;CL:0000764,4.89e-07,2;CL:0000765,4.89e-07,2;CL:0000050,4.89e-07,2;CL:0000038,4.89e-07,2;CL:0000558,4.89e-07,2;CL:0000547,4.89e-07,2;CL:0000549,4.89e-07,2;CL:0000550,4.89e-07,2;CL:0000552,4.89e-07,2;CL:0000066,9.75e-07,253 | |||
|ontology_enrichment_development_v019=UBERON:0008947;3.93e-18;29!UBERON:0001041;6.90e-07;30 | |ontology_enrichment_development_v019=UBERON:0008947;3.93e-18;29!UBERON:0001041;6.90e-07;30 | ||
|ontology_enrichment_disease=DOID:305!1.57e-10!106;DOID:0050687!2.49e-08!143 | |ontology_enrichment_disease=DOID:305!1.57e-10!106;DOID:0050687!2.49e-08!143 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2=DOID:305,3.54e-15,106;DOID:0050687,5.08e-13,143 | |||
|ontology_enrichment_uberon=UBERON:0004119!6.80e-14!169;UBERON:0000925!6.80e-14!169;UBERON:0006595!6.80e-14!169;UBERON:0000077!7.66e-13!130;UBERON:0008947!4.26e-12!38;UBERON:0003258!4.26e-12!38;UBERON:0001041!1.23e-11!98;UBERON:0001007!1.30e-11!155;UBERON:0001555!1.30e-11!155;UBERON:0007026!1.30e-11!155;UBERON:0004921!6.89e-11!129;UBERON:0004185!6.89e-11!129;UBERON:0001737!1.23e-10!9;UBERON:0000065!1.47e-10!53;UBERON:0001048!5.55e-08!168;UBERON:0005911!2.29e-07!82;UBERON:0000072!2.75e-07!46 | |ontology_enrichment_uberon=UBERON:0004119!6.80e-14!169;UBERON:0000925!6.80e-14!169;UBERON:0006595!6.80e-14!169;UBERON:0000077!7.66e-13!130;UBERON:0008947!4.26e-12!38;UBERON:0003258!4.26e-12!38;UBERON:0001041!1.23e-11!98;UBERON:0001007!1.30e-11!155;UBERON:0001555!1.30e-11!155;UBERON:0007026!1.30e-11!155;UBERON:0004921!6.89e-11!129;UBERON:0004185!6.89e-11!129;UBERON:0001737!1.23e-10!9;UBERON:0000065!1.47e-10!53;UBERON:0001048!5.55e-08!168;UBERON:0005911!2.29e-07!82;UBERON:0000072!2.75e-07!46 | ||
|ontology_enrichment_uberon_v019=UBERON:0001737;7.12e-16;9!UBERON:0001557;7.12e-16;9!UBERON:0000178;7.01e-13;15!UBERON:0000179;7.01e-13;15!UBERON:0000463;7.01e-13;15!UBERON:0000072;4.40e-09;37!UBERON:0000065;8.36e-09;44!UBERON:0002390;4.98e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0001737;7.12e-16;9!UBERON:0001557;7.12e-16;9!UBERON:0000178;7.01e-13;15!UBERON:0000179;7.01e-13;15!UBERON:0000463;7.01e-13;15!UBERON:0000072;4.40e-09;37!UBERON:0000065;8.36e-09;44!UBERON:0002390;4.98e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0001737,3.95e-16,9;UBERON:0000178,4.53e-13,15;UBERON:0000179,4.53e-13,15;UBERON:0000463,4.53e-13,15;UBERON:0008947,5.76e-13,38;UBERON:0003258,5.76e-13,38;UBERON:0001041,1.13e-11,87;UBERON:0004921,1.64e-08,118;UBERON:0000065,5.41e-08,54;UBERON:0001048,9.65e-08,160;UBERON:0000072,4.50e-07,47;UBERON:0001557,6.39e-07,19 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,1.0843174571537,0,0.869079113764942,0,0,0,0,0,3.01251873644739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0.570471821544449,0.448346041655403,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0.250237039743928,0.554128230968366,0,0,0,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,1.45782745153634,0.813357600086629,0.310983165046111,1.51392510525377,0,0,0,0,0,0,1.53798840051797,1.85443159085912,1.68707720918437,1.7647035637183,0.871517776369625,2.13543557199987,2.29213223872279,1.56977172100277,1.53898862778556,0,0,0,0,26.6185573125845,41.2787431004603,31.3118650541144,0,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,1.03993478527958,0,0.115930404975077,0,0.721832238805369,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514414748524284,0,0,0,0,0,0,0,0,1.80863626235752,3.48613383440118,2.39935178836937,0,0,0,0,0,0,0,1.43833425785268,2.32779252211864,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0.246381468041427,0,0.116210378459959,0,0.200506470303285,0.0920809889358963,0.114814448164607,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,54.5957092848377,49.934171145756,0,0,0,17.3108899568173,0,0,0,1.30012049207304,0,0,0,0.460511024178389,0.275673144969061,0.322260734604821,0,0.255679882248303,0,0,0.192190067365106,0.765676274967505,0.6069466851333,0,0.31481234683064,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0.0962221127255121,0,0,13.9332825149633,0.43050537267123,0,3.54744122829341,0.229723400206959,7.10426652925037,4.58782324285425,7.40541343326411,1.90585420366231,2.46817363851717,1.94541993357815,8.10047155857172,9.51750211553125,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.974154617347,0,0,0,0,0,0,0,0.1137934482855,0,1.65471377237555,0.344743373241465,0,0,0,0,0,0,0,0,0.980446171670911,0,0.0769502585037971,0,7.37804494041792,28.363415633488,33.5720379239005,0,0.0915975934018623,1.06606955203727,0,0,0.332423363800313,0,0,0,0,0.794682894901893,0,0.326465616318295,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,1.9566461893209,2.91336455440911,0,0,0,0,0,0,0,0,1.2557316736289,0,0,0,0,2.05784034570193,0,0.698906672968121,0,2.99944626996164,2.85048336636124,3.28461828212837,0.0969890164884194,0,0,0,0,0,1.17330829640882,0,0.213452994739353,1.9980960958213,1.00863292007874,0,0,0,0,2.12124631155116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0.0674035438541849,0,0,0,0,0,0.275078873194468,1.24632101408756,0,0,0,0,0.157611414598396,0.314727528809989,0,2.51002275065983,0.191915197319445,0,0,0,0,0,0,0,0,0,0,22.5690439864247,19.8760333368332,0,0,7.69890770479482,2.11444506695002,8.0090559425771,0.78602152549833,4.97086866416635,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.856396000634902,0,0,0,0.149254802886874,0,0,0,0,1.77962244319307,0,0,0,0.147855149989634,0.159296767163702,0.449803112163605,0,0,0.265841714557995,0.521745061811734,2.10360652596106,2.28483127301277,1.22061219961398,0,0.322231671127465,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12026975135057,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.6668560591794,0,1.47856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,1.89110145414349,3.44817345865414,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0.098150233615243,0.487671699929078,0,0,0,0,0,0,4.63788354032517,0.45178432815584,0,1.20770274853339,0,0,0,0,0,0,0,0.4226557275834,0,0.281951753939561,1.67590508731301,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0.437062287854782,0,1.32585478664576,1.06886962106224,0,0,3.41004141982077,11.2544934665595,0,0,1.91910583710883,0.476128862927481,0,0.31037357147929,0,0.0636471582781649,0.404234377916439,0,0,0.0673520530145875,0.215166616178029,0.332660356546013,0.0814032686109745,0.320182037633146,0,0.359300808426348,2.34640942403454,0,0.406896178315738,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0.30120591877825,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790152254325231,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,1.0843174571537,0,0.869079113764942,0,0,0,0,0,3.01251873644739,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.805658634218294,0,0.488124115096339,0,0,0,0,0,0,0,0,0,0,0,0,0,0.397227542439656,0,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0.570471821544449,0.448346041655403,0,0,0,0,0.122834317311768,0.103325781175765,0,0,0,0,0.168336113954066,0.250237039743928,0.554128230968366,0,0,0,0,0,0,0,0,0,0.257640540045629,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0.609868530647977,1.45782745153634,0.813357600086629,0.310983165046111,1.51392510525377,0,0,0,0,0,0,1.53798840051797,1.85443159085912,1.68707720918437,1.7647035637183,0.871517776369625,2.13543557199987,2.29213223872279,1.56977172100277,1.53898862778556,0,0,0,0,26.6185573125845,41.2787431004603,31.3118650541144,0,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,1.03993478527958,0,0.115930404975077,0,0.721832238805369,0,0,0,0,0,0,0.148631162288728,0,0,0,0,0,0,0,0,0.207328115540772,0,0,0,0.381988425558278,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514414748524284,0,0,0,0,0,0,0,0,1.80863626235752,3.48613383440118,2.39935178836937,0,0,0,0,0,0,0,1.43833425785268,2.32779252211864,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0.117141414992713,0,0,0,0,0,0.173767228936166,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.355123450626254,0.246381468041427,0,0.116210378459959,0,0.200506470303285,0.0920809889358963,0.114814448164607,0,0,0,0.15403067420883,0,0,0,0,0,0,0,0,0,0,0,0,54.5957092848377,49.934171145756,0,0,0,17.3108899568173,0,0,0,1.30012049207304,0,0,0,0.460511024178389,0.275673144969061,0.322260734604821,0,0.255679882248303,0,0,0.192190067365106,0.765676274967505,0.6069466851333,0,0.31481234683064,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.658589785919804,0,0,0.0962221127255121,0,0,13.9332825149633,0.43050537267123,0,3.54744122829341,0.229723400206959,7.10426652925037,4.58782324285425,7.40541343326411,1.90585420366231,2.46817363851717,1.94541993357815,8.10047155857172,9.51750211553125,0,0,1.22520107990516,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222886768554957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.974154617347,0,0,0,0,0,0,0,0.1137934482855,0,1.65471377237555,0.344743373241465,0,0,0,0,0,0,0,0,0.980446171670911,0,0.0769502585037971,0,7.37804494041792,28.363415633488,33.5720379239005,0,0.0915975934018623,1.06606955203727,0,0,0.332423363800313,0,0,0,0,0.794682894901893,0,0.326465616318295,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,1.9566461893209,2.91336455440911,0,0,0,0,0,0,0,0,1.2557316736289,0,0,0,0,2.05784034570193,0,0.698906672968121,0,2.99944626996164,2.85048336636124,3.28461828212837,0.0969890164884194,0,0,0,0,0,1.17330829640882,0,0.213452994739353,1.9980960958213,1.00863292007874,0,0,0,0,2.12124631155116,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.134366944973453,0,0,0,0,0.0674035438541849,0,0,0,0,0,0.275078873194468,1.24632101408756,0,0,0,0,0.157611414598396,0.314727528809989,0,2.51002275065983,0.191915197319445,0,0,0,0,0,0,0,0,0,0,22.5690439864247,19.8760333368332,0,0,7.69890770479482,2.11444506695002,8.0090559425771,0.78602152549833,4.97086866416635,0,0,0,1.27668251554036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.856396000634902,0,0,0,0.149254802886874,0,0,0,0,1.77962244319307,0,0,0,0.147855149989634,0.159296767163702,0.449803112163605,0,0,0.265841714557995,0.521745061811734,2.10360652596106,2.28483127301277,1.22061219961398,0,0.322231671127465,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,2.12026975135057,0,0,0,0,0,0,0,0.132864840313363,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123935764259002,0,0,0,0,0,0,0,0,0,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.6668560591794,0,1.47856086217045,0,0,0,0,0,0,0,0,0.127762427639595,0,0,0,0.227662191351298,0.0887023701626388,0,0,0,0,1.89110145414349,3.44817345865414,0.156986185701028,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0,0.4582137370881,0,0,0,0.098150233615243,0.487671699929078,0,0,0,0,0,0,4.63788354032517,0.45178432815584,0,1.20770274853339,0,0,0,0,0,0,0,0.4226557275834,0,0.281951753939561,1.67590508731301,0,0,0,0,0,0,0,0,0,0,0.5290268405154,0,0,0,0,0.437062287854782,0,1.32585478664576,1.06886962106224,0,0,3.41004141982077,11.2544934665595,0,0,1.91910583710883,0.476128862927481,0,0.31037357147929,0,0.0636471582781649,0.404234377916439,0,0,0.0673520530145875,0.215166616178029,0.332660356546013,0.0814032686109745,0.320182037633146,0,0.359300808426348,2.34640942403454,0,0.406896178315738,0,0,0 | ||
|short_description=p1@SEC14L4 | |short_description=p1@SEC14L4 | ||
}} | }} |
Revision as of 02:39, 20 November 2012
Short description: | p1@SEC14L4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_1_at_SEC14L4_5end |
Coexpression cluster: | C3099_Reticulocytes_Hepatocyte_choriocarcinoma_liver_pancreatic_Whole_blood |
Association with transcript: | 0bp_to_ENST00000255858, ENST00000320982, ENST00000321205, ENST00000392772, ENST00000540456, NM_001161368, NM_174977, uc003aid.2, uc003aie.2, uc003aif.2, uc011akz.1_5end |
EntrezGene: | SEC14L4 |
HGNC: | 20627 |
UniProt: | Q9UDX3D7F472F8WEM2B3KSF0G3V1L4A5D6W7B2RMR2B3KRP9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 2.86e-09 | 7 |
germ cell | 2.86e-09 | 7 |
erythroid lineage cell | 4.89e-07 | 2 |
erythroblast | 4.89e-07 | 2 |
megakaryocyte-erythroid progenitor cell | 4.89e-07 | 2 |
erythroid progenitor cell | 4.89e-07 | 2 |
reticulocyte | 4.89e-07 | 2 |
proerythroblast | 4.89e-07 | 2 |
basophilic erythroblast | 4.89e-07 | 2 |
polychromatophilic erythroblast | 4.89e-07 | 2 |
orthochromatic erythroblast | 4.89e-07 | 2 |
epithelial cell | 9.75e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
larynx | 3.95e-16 | 9 |
blood | 4.53e-13 | 15 |
haemolymphatic fluid | 4.53e-13 | 15 |
organism substance | 4.53e-13 | 15 |
respiratory primordium | 5.76e-13 | 38 |
endoderm of foregut | 5.76e-13 | 38 |
foregut | 1.13e-11 | 87 |
subdivision of digestive tract | 1.64e-08 | 118 |
respiratory tract | 5.41e-08 | 54 |
primordium | 9.65e-08 | 160 |
segment of respiratory tract | 4.50e-07 | 47 |
upper respiratory tract | 6.39e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 3.54e-15 | 106 |
cell type cancer | 5.08e-13 | 143 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.