FFCP PHASE1:Hg19::chr22:31644394..31644405,+: Difference between revisions
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|ontology_enrichment_celltype=CL:0002076!1.04e-10!43;CL:0002077!3.85e-09!33;CL:0000066!9.66e-09!254;CL:0002321!3.24e-07!248;CL:0002159!3.77e-07!13;CL:0000220!4.07e-07!246 | |ontology_enrichment_celltype=CL:0002076!1.04e-10!43;CL:0002077!3.85e-09!33;CL:0000066!9.66e-09!254;CL:0002321!3.24e-07!248;CL:0002159!3.77e-07!13;CL:0000220!4.07e-07!246 | ||
|ontology_enrichment_celltype_v019=CL:0002076;5.50e-11;42!CL:0000349;1.75e-10;19!CL:0002159;2.36e-09;14!CL:0002368;2.57e-09;13!CL:0002077;2.20e-07;34!CL:0000244;2.27e-07;4!CL:0000731;2.27e-07;4 | |ontology_enrichment_celltype_v019=CL:0002076;5.50e-11;42!CL:0000349;1.75e-10;19!CL:0002159;2.36e-09;14!CL:0002368;2.57e-09;13!CL:0002077;2.20e-07;34!CL:0000244;2.27e-07;4!CL:0000731;2.27e-07;4 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,1.48e-14,42;CL:0000066,5.41e-13,253;CL:0000349,1.06e-10,19;CL:0000223,2.00e-09,58;CL:0002368,2.01e-09,13;CL:0002159,2.77e-09,14;CL:0002077,1.82e-08,34;CL:0000244,2.22e-07,4;CL:0000731,2.22e-07,4 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!1.72e-14!365;UBERON:0004121!1.28e-13!169;UBERON:0000924!1.52e-12!173;UBERON:0006601!1.52e-12!173;UBERON:0000119!1.07e-10!312;UBERON:0000483!1.19e-10!309;UBERON:0003075!1.39e-10!86;UBERON:0007284!1.39e-10!86;UBERON:0000033!1.63e-10!123;UBERON:0000153!2.09e-10!129;UBERON:0007811!2.09e-10!129;UBERON:0000064!5.19e-10!219;UBERON:0000468!8.93e-10!659;UBERON:0002346!2.90e-09!90;UBERON:0005631!5.49e-09!14;UBERON:0000158!5.49e-09!14;UBERON:0000467!9.85e-09!625;UBERON:0000480!1.35e-08!626;UBERON:0003056!1.67e-08!61;UBERON:0001049!2.61e-08!57;UBERON:0005068!2.61e-08!57;UBERON:0006241!2.61e-08!57;UBERON:0007135!2.61e-08!57;UBERON:0000922!4.36e-08!612;UBERON:0005743!7.32e-08!86;UBERON:0002050!8.18e-08!605;UBERON:0005423!8.18e-08!605;UBERON:0000481!1.14e-07!347;UBERON:0000923!1.15e-07!604;UBERON:0005291!1.15e-07!604;UBERON:0006598!1.15e-07!604;UBERON:0002532!1.15e-07!604;UBERON:0000062!1.35e-07!511;UBERON:0000063!1.88e-07!97;UBERON:0005085!2.04e-07!29;UBERON:0002616!2.49e-07!59;UBERON:0001017!2.95e-07!82 | |ontology_enrichment_uberon=UBERON:0000475!1.72e-14!365;UBERON:0004121!1.28e-13!169;UBERON:0000924!1.52e-12!173;UBERON:0006601!1.52e-12!173;UBERON:0000119!1.07e-10!312;UBERON:0000483!1.19e-10!309;UBERON:0003075!1.39e-10!86;UBERON:0007284!1.39e-10!86;UBERON:0000033!1.63e-10!123;UBERON:0000153!2.09e-10!129;UBERON:0007811!2.09e-10!129;UBERON:0000064!5.19e-10!219;UBERON:0000468!8.93e-10!659;UBERON:0002346!2.90e-09!90;UBERON:0005631!5.49e-09!14;UBERON:0000158!5.49e-09!14;UBERON:0000467!9.85e-09!625;UBERON:0000480!1.35e-08!626;UBERON:0003056!1.67e-08!61;UBERON:0001049!2.61e-08!57;UBERON:0005068!2.61e-08!57;UBERON:0006241!2.61e-08!57;UBERON:0007135!2.61e-08!57;UBERON:0000922!4.36e-08!612;UBERON:0005743!7.32e-08!86;UBERON:0002050!8.18e-08!605;UBERON:0005423!8.18e-08!605;UBERON:0000481!1.14e-07!347;UBERON:0000923!1.15e-07!604;UBERON:0005291!1.15e-07!604;UBERON:0006598!1.15e-07!604;UBERON:0002532!1.15e-07!604;UBERON:0000062!1.35e-07!511;UBERON:0000063!1.88e-07!97;UBERON:0005085!2.04e-07!29;UBERON:0002616!2.49e-07!59;UBERON:0001017!2.95e-07!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0010371;1.88e-09;31!UBERON:0007625;2.14e-09;11!UBERON:0000478;5.84e-09;24!UBERON:0003688;2.48e-07;6!UBERON:0002358;2.48e-07;6!UBERON:0003684;2.48e-07;6!UBERON:0001178;2.48e-07;6!UBERON:0000019;3.07e-07;19!UBERON:0000047;3.07e-07;19!UBERON:0004088;3.07e-07;19!UBERON:0010230;3.07e-07;19!UBERON:0005631;3.52e-07;10!UBERON:0000158;3.52e-07;10!UBERON:0001801;5.18e-07;14!UBERON:0000970;9.75e-07;20 | |ontology_enrichment_uberon_v019=UBERON:0010371;1.88e-09;31!UBERON:0007625;2.14e-09;11!UBERON:0000478;5.84e-09;24!UBERON:0003688;2.48e-07;6!UBERON:0002358;2.48e-07;6!UBERON:0003684;2.48e-07;6!UBERON:0001178;2.48e-07;6!UBERON:0000019;3.07e-07;19!UBERON:0000047;3.07e-07;19!UBERON:0004088;3.07e-07;19!UBERON:0010230;3.07e-07;19!UBERON:0005631;3.52e-07;10!UBERON:0000158;3.52e-07;10!UBERON:0001801;5.18e-07;14!UBERON:0000970;9.75e-07;20 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0005631,1.25e-11,14;UBERON:0000158,1.25e-11,14;UBERON:0010371,8.50e-11,104;UBERON:0005085,2.30e-10,31;UBERON:0003124,1.58e-09,7;UBERON:0007625,2.21e-09,11;UBERON:0000478,4.11e-09,24;UBERON:0004121,2.81e-08,171;UBERON:0000924,2.81e-08,171;UBERON:0006601,2.81e-08,171;UBERON:0000033,1.32e-07,56;UBERON:0000076,1.38e-07,8;UBERON:0004923,2.21e-07,66;UBERON:0003688,4.59e-07,6;UBERON:0002358,4.59e-07,6;UBERON:0003684,4.59e-07,6;UBERON:0001178,4.59e-07,6;UBERON:0001801,5.45e-07,14 | |||
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| ||
|short_description=p4@LIMK2 | |short_description=p4@LIMK2 | ||
}} | }} |
Revision as of 17:38, 20 November 2012
Short description: | p4@LIMK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_4_at_LIMK2_5end |
Coexpression cluster: | C4094_Urothelial_Prostate_serous_Mallassezderived_Keratinocyte_Esophageal_Corneal |
Association with transcript: | 6bp_to_ENST00000333611_5end |
EntrezGene: | LIMK2 |
HGNC: | 6614 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 1.48e-14 | 42 |
epithelial cell | 5.41e-13 | 253 |
extraembryonic cell | 1.06e-10 | 19 |
endodermal cell | 2.00e-09 | 58 |
respiratory epithelial cell | 2.01e-09 | 13 |
general ecto-epithelial cell | 2.77e-09 | 14 |
ecto-epithelial cell | 1.82e-08 | 34 |
transitional epithelial cell | 2.22e-07 | 4 |
urothelial cell | 2.22e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
extraembryonic membrane | 1.25e-11 | 14 |
membranous layer | 1.25e-11 | 14 |
ecto-epithelium | 8.50e-11 | 104 |
ectodermal placode | 2.30e-10 | 31 |
chorion | 1.58e-09 | 7 |
pigment epithelium of eye | 2.21e-09 | 11 |
extraembryonic structure | 4.11e-09 | 24 |
ectoderm-derived structure | 2.81e-08 | 171 |
ectoderm | 2.81e-08 | 171 |
presumptive ectoderm | 2.81e-08 | 171 |
head | 1.32e-07 | 56 |
external ectoderm | 1.38e-07 | 8 |
organ component layer | 2.21e-07 | 66 |
omentum | 4.59e-07 | 6 |
peritoneum | 4.59e-07 | 6 |
abdominal cavity | 4.59e-07 | 6 |
visceral peritoneum | 4.59e-07 | 6 |
anterior segment of eyeball | 5.45e-07 | 14 |
Property "Dpi dataset" (as page type) with input value "{{{DPIdataset}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "TSS like by RIKEN classifier" (as page type) with input value "{{{TSSclassifier}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.