FFCP PHASE1:Hg19::chr10:104406129..104406159,-: Difference between revisions
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{{FFCP | {{FFCP|DPIdataset=robustDPI|EntrezGene=NA|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript|HGNC=NA|TSSclassifier=N|UniProt=NA|association_with_transcript=NA|coexpression_cluster_id=C0|description=CAGE_peak_at_chr10:104406129..104406159,-|id=chr10:104406129..104406159,-|ontology_enrichment_celltype=CL:0000738!1.02e-32!140;CL:0000988!3.78e-27!182;CL:0002087!5.84e-27!119;CL:0000037!2.57e-26!172;CL:0000566!2.57e-26!172;CL:0002031!1.44e-25!124;CL:0002057!3.54e-24!42;CL:0002032!9.34e-24!165;CL:0000837!9.34e-24!165;CL:0000860!2.47e-23!45;CL:0000766!2.70e-21!76;CL:0000557!9.50e-17!71;CL:0000839!3.24e-16!70;CL:0002009!8.89e-16!65;CL:0002194!9.22e-16!63;CL:0000576!9.22e-16!63;CL:0000040!9.22e-16!63;CL:0000559!9.22e-16!63;CL:0000763!6.66e-14!112;CL:0000049!6.66e-14!112;CL:0000542!9.25e-10!53;CL:0000051!9.25e-10!53;CL:0000838!1.61e-09!52;CL:0000791!1.63e-07!18;CL:0000789!1.63e-07!18;CL:0002420!1.63e-07!18;CL:0002419!1.63e-07!18;CL:0000790!1.63e-07!18;CL:0000071!4.52e-07!18;CL:0002546!4.52e-07!18|ontology_enrichment_celltype_v019=CL:0000860;2.03e-48;33!CL:0002057;2.03e-48;33!CL:0000473;1.77e-34;39!CL:0000234;1.77e-34;39!CL:0000576;2.59e-26;48!CL:0000766;3.71e-25;69!CL:0002087;2.19e-12;104!CL:0000763;1.42e-11;100!CL:0000738;2.41e-10;136!CL:0000094;3.04e-09;8!CL:0000771;1.84e-07;2|ontology_enrichment_celltype_v019_2=CL:0000860,2.85e-51,42;CL:0002057,2.85e-51,42;CL:0000766,7.14e-48,72;CL:0000473,5.81e-47,48;CL:0000234,5.81e-47,48;CL:0000738,6.96e-40,136;CL:0000839,1.61e-38,66;CL:0000557,8.14e-38,67;CL:0002194,7.62e-36,59;CL:0000576,7.62e-36,59;CL:0000040,7.62e-36,59;CL:0000559,7.62e-36,59;CL:0002009,2.06e-34,61;CL:0002031,1.65e-32,120;CL:0002087,1.78e-32,115;CL:0000037,6.76e-30,168;CL:0002032,1.08e-28,161;CL:0000837,1.08e-28,161;CL:0000763,1.39e-28,108;CL:0000049,1.39e-28,108;CL:0000988,9.72e-28,177;CL:0000094,3.84e-09,8;CL:0000134,1.88e-08,354;CL:0002320,4.59e-08,361;CL:0000219,7.88e-08,386;CL:0000771,1.87e-07,2|ontology_enrichment_development_v019=CL:0002057;3.20e-38;42!CL:0000049;8.65e-08;108|ontology_enrichment_disease=|ontology_enrichment_disease_v019=|ontology_enrichment_disease_v019_2=|ontology_enrichment_uberon=UBERON:0002390!1.54e-21!102;UBERON:0003061!1.54e-21!102;UBERON:0002193!2.33e-19!112;UBERON:0003081!9.62e-17!216;UBERON:0002371!3.91e-14!80;UBERON:0001474!7.19e-12!86;UBERON:0002405!7.66e-10!115;UBERON:0004765!3.32e-09!101;UBERON:0001434!3.32e-09!101;UBERON:0001986!4.52e-07!18;UBERON:0004638!4.52e-07!18;UBERON:0004852!4.52e-07!18;UBERON:0002204!6.61e-07!167;UBERON:0000178!8.85e-07!15;UBERON:0000179!8.85e-07!15;UBERON:0000463!8.85e-07!15|ontology_enrichment_uberon_v019=UBERON:0000178;2.04e-10;15!UBERON:0000179;2.04e-10;15!UBERON:0000463;2.04e-10;15|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.16e-40,98;UBERON:0003061,2.16e-40,98;UBERON:0002193,1.21e-35,108;UBERON:0002371,2.62e-32,76;UBERON:0001474,2.63e-29,82;UBERON:0002405,1.40e-26,93;UBERON:0004765,6.33e-26,90;UBERON:0003081,1.28e-22,203;UBERON:0001434,1.84e-22,100;UBERON:0002204,9.69e-13,167;UBERON:0000178,1.79e-10,15;UBERON:0000179,1.79e-10,15;UBERON:0000463,1.79e-10,15;UBERON:0000926,2.95e-10,315;UBERON:0004120,2.95e-10,315;UBERON:0006603,2.95e-10,315;UBERON:0002384,1.55e-07,371|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0.245733936501509,0.697801167972428,0,0,0,0,0,0,0,0,0.123121058076788,0,0.626909442956176,0,0.136874425072884,0,0.382067028739756,0.410502947249729,0.472264687882075,1.18009283054671,0.767658796194425,0.77408061658038,0,0,0.369754010166788,0.154934401160603,0.426507697462265,0.293600439334847,2.21598163412751,2.20598892217156,2.38711957787437,0.223915474239924,0,0,1.16318591023652,1.51150377475524,0.970336244751265,1.39457422143411,2.05583944010913,1.85823822537062,2.58923153089935,1.0246428261164,1.41889337933151,3.7922024881028,4.51839278508678,2.70852973188684,1.50593871634084,1.09162460023138,2.02251136000576,4.59125838556354,1.60464513538047,1.91801137739712,0.659702600373432,1.79517291859469,0,8.9964863974861,6.24123747160254,8.09668923694247,4.01997864410789,2.60741459210101,0,7.87019353423379,4.41933163185078,7.27863491114034,0,0.425208599930087,0.419317291016752,0.561643155732475,0.600707571366025,0.48217676009124,0.570025487482497,0,0,0,0.546138611262131,2.66852776159066,1.28019066769952,0.400395987036012,0,0,1.90810750907073,1.1384259382189,0,0.382273228125229,0,2.80254281490768,0,0.786839080455332,0.786021525498329,1.23360899399706,0.501559486172034,0.977766799900771,0.946895611469467,1.94826728407911,0.111410456885174,1.47302953737419,0.664601683750863,0,0.768547918354051,0.520237390239513,0.164437904603676,0,0.289803085735052,0.296573126324121,0,1.04535523804977,0.453237370790265,1.53288197440768,0.68725489096526,0.253019692019503,0.318565414324097,0,0,0.602300476311091,0.383959833463255,0,0.236777252044017,0.821127996921047,0.80642697289893,1.06976078313403,1.15859523106239,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0,0,0,0,0,0,0,0.476981248610684,0.571994910780128,0.3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| ||
|DPIdataset=robustDPI | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=N | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr10:104406129..104406159,- | |||
|id=chr10:104406129..104406159,- | |||
|ontology_enrichment_celltype=CL:0000738!1.02e-32!140;CL:0000988!3.78e-27!182;CL:0002087!5.84e-27!119;CL:0000037!2.57e-26!172;CL:0000566!2.57e-26!172;CL:0002031!1.44e-25!124;CL:0002057!3.54e-24!42;CL:0002032!9.34e-24!165;CL:0000837!9.34e-24!165;CL:0000860!2.47e-23!45;CL:0000766!2.70e-21!76;CL:0000557!9.50e-17!71;CL:0000839!3.24e-16!70;CL:0002009!8.89e-16!65;CL:0002194!9.22e-16!63;CL:0000576!9.22e-16!63;CL:0000040!9.22e-16!63;CL:0000559!9.22e-16!63;CL:0000763!6.66e-14!112;CL:0000049!6.66e-14!112;CL:0000542!9.25e-10!53;CL:0000051!9.25e-10!53;CL:0000838!1.61e-09!52;CL:0000791!1.63e-07!18;CL:0000789!1.63e-07!18;CL:0002420!1.63e-07!18;CL:0002419!1.63e-07!18;CL:0000790!1.63e-07!18;CL:0000071!4.52e-07!18;CL:0002546!4.52e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.03e-48;33!CL:0002057;2.03e-48;33!CL:0000473;1.77e-34;39!CL:0000234;1.77e-34;39!CL:0000576;2.59e-26;48!CL:0000766;3.71e-25;69!CL:0002087;2.19e-12;104!CL:0000763;1.42e-11;100!CL:0000738;2.41e-10;136!CL:0000094;3.04e-09;8!CL:0000771;1.84e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.85e-51,42;CL:0002057,2.85e-51,42;CL:0000766,7.14e-48,72;CL:0000473,5.81e-47,48;CL:0000234,5.81e-47,48;CL:0000738,6.96e-40,136;CL:0000839,1.61e-38,66;CL:0000557,8.14e-38,67;CL:0002194,7.62e-36,59;CL:0000576,7.62e-36,59;CL:0000040,7.62e-36,59;CL:0000559,7.62e-36,59;CL:0002009,2.06e-34,61;CL:0002031,1.65e-32,120;CL:0002087,1.78e-32,115;CL:0000037,6.76e-30,168;CL:0002032,1.08e-28,161;CL:0000837,1.08e-28,161;CL:0000763,1.39e-28,108;CL:0000049,1.39e-28,108;CL:0000988,9.72e-28,177;CL:0000094,3.84e-09,8;CL:0000134,1.88e-08,354;CL:0002320,4.59e-08,361;CL:0000219,7.88e-08,386;CL:0000771,1.87e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;3.20e-38;42!CL:0000049;8.65e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.54e-21!102;UBERON:0003061!1.54e-21!102;UBERON:0002193!2.33e-19!112;UBERON:0003081!9.62e-17!216;UBERON:0002371!3.91e-14!80;UBERON:0001474!7.19e-12!86;UBERON:0002405!7.66e-10!115;UBERON:0004765!3.32e-09!101;UBERON:0001434!3.32e-09!101;UBERON:0001986!4.52e-07!18;UBERON:0004638!4.52e-07!18;UBERON:0004852!4.52e-07!18;UBERON:0002204!6.61e-07!167;UBERON:0000178!8.85e-07!15;UBERON:0000179!8.85e-07!15;UBERON:0000463!8.85e-07!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.04e-10;15!UBERON:0000179;2.04e-10;15!UBERON:0000463;2.04e-10;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.16e-40,98;UBERON:0003061,2.16e-40,98;UBERON:0002193,1.21e-35,108;UBERON:0002371,2.62e-32,76;UBERON:0001474,2.63e-29,82;UBERON:0002405,1.40e-26,93;UBERON:0004765,6.33e-26,90;UBERON:0003081,1.28e-22,203;UBERON:0001434,1.84e-22,100;UBERON:0002204,9.69e-13,167;UBERON:0000178,1.79e-10,15;UBERON:0000179,1.79e-10,15;UBERON:0000463,1.79e-10,15;UBERON:0000926,2.95e-10,315;UBERON:0004120,2.95e-10,315;UBERON:0006603,2.95e-10,315;UBERON:0002384,1.55e-07,371 | |||
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| |||
|short_description=p@chr10:104406129..104406159,- | |||
}} |
Revision as of 11:27, 10 September 2013
Short description: | p@chr10:104406129..104406159, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr10:104406129..104406159, - |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.85e-51 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.85e-51 | 42 |
myeloid leukocyte | 7.14e-48 | 72 |
defensive cell | 5.81e-47 | 48 |
phagocyte | 5.81e-47 | 48 |
leukocyte | 6.96e-40 | 136 |
myeloid lineage restricted progenitor cell | 1.61e-38 | 66 |
granulocyte monocyte progenitor cell | 8.14e-38 | 67 |
monopoietic cell | 7.62e-36 | 59 |
monocyte | 7.62e-36 | 59 |
monoblast | 7.62e-36 | 59 |
promonocyte | 7.62e-36 | 59 |
macrophage dendritic cell progenitor | 2.06e-34 | 61 |
hematopoietic lineage restricted progenitor cell | 1.65e-32 | 120 |
nongranular leukocyte | 1.78e-32 | 115 |
hematopoietic stem cell | 6.76e-30 | 168 |
hematopoietic oligopotent progenitor cell | 1.08e-28 | 161 |
hematopoietic multipotent progenitor cell | 1.08e-28 | 161 |
myeloid cell | 1.39e-28 | 108 |
common myeloid progenitor | 1.39e-28 | 108 |
hematopoietic cell | 9.72e-28 | 177 |
granulocyte | 3.84e-09 | 8 |
mesenchymal cell | 1.88e-08 | 354 |
connective tissue cell | 4.59e-08 | 361 |
motile cell | 7.88e-08 | 386 |
eosinophil | 1.87e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.16e-40 | 98 |
blood island | 2.16e-40 | 98 |
hemolymphoid system | 1.21e-35 | 108 |
bone marrow | 2.62e-32 | 76 |
bone element | 2.63e-29 | 82 |
immune system | 1.40e-26 | 93 |
skeletal element | 6.33e-26 | 90 |
lateral plate mesoderm | 1.28e-22 | 203 |
skeletal system | 1.84e-22 | 100 |
musculoskeletal system | 9.69e-13 | 167 |
blood | 1.79e-10 | 15 |
haemolymphatic fluid | 1.79e-10 | 15 |
organism substance | 1.79e-10 | 15 |
mesoderm | 2.95e-10 | 315 |
mesoderm-derived structure | 2.95e-10 | 315 |
presumptive mesoderm | 2.95e-10 | 315 |
connective tissue | 1.55e-07 | 371 |
Property "DHS support" (as page type) with input value "{{{DHSsupport}}}" contains invalid characters or is incomplete and therefore can cause unexpected results during a query or annotation process.